RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 C14orf144Q96I85 54 aa9.66□□□□□ -0.86
NUP50-208ENST00000430547 TCL1BO95988 128 aa9.65□□□□□ -0.86
NUP50-208ENST00000430547 VAMP8Q9BV40 100 aa9.65□□□□□ -0.86
NUP50-208ENST00000430547 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.64□□□□□ -0.87
NUP50-208ENST00000430547 RAB37Q96AX2 223 aa9.64□□□□□ -0.87
NUP50-208ENST00000430547 C1orf195Q5TG92 126 aa9.62□□□□□ -0.87
NUP50-208ENST00000430547 Q6JHZ5 121 aa9.62□□□□□ -0.87
NUP50-208ENST00000430547 HIGD1BQ9P298 99 aa9.62□□□□□ -0.87
NUP50-208ENST00000430547 SNCGO76070 127 aa9.61□□□□□ -0.87
NUP50-208ENST00000430547 PPDPFLQ8WWR9 84 aa9.61□□□□□ -0.87
NUP50-208ENST00000430547 KRTAP4-1Q9BYQ7 146 aa9.61□□□□□ -0.87
NUP50-208ENST00000430547 CFC1BP0CG36 223 aa9.6□□□□□ -0.87
NUP50-208ENST00000430547 CFC1P0CG37 223 aa9.6□□□□□ -0.87
NUP50-208ENST00000430547 CLEC2BQ92478 149 aa9.6□□□□□ -0.87
NUP50-208ENST00000430547 SNHG12Q9BXW3 62 aa9.59□□□□□ -0.87
NUP50-208ENST00000430547 IGLV8-61A0A075B6I0 122 aa9.58□□□□□ -0.88
NUP50-208ENST00000430547 A0A0B4J2C4 111 aa9.58□□□□□ -0.88
NUP50-208ENST00000430547 OCIAD2Q56VL3 154 aa9.58□□□□□ -0.88
NUP50-208ENST00000430547 PCOTHQ58A44 107 aa9.56□□□□□ -0.88
NUP50-208ENST00000430547 IGFL1Q6UW32 110 aa9.56□□□□□ -0.88
NUP50-208ENST00000430547 C2orf91Q6ZV80 131 aa9.56□□□□□ -0.88
NUP50-208ENST00000430547 TMEM238LA0A1B0GVL6 79 aa9.55□□□□□ -0.88
NUP50-208ENST00000430547 A6NJY4 79 aa9.55□□□□□ -0.88
NUP50-208ENST00000430547 H0YGX0 51 aa9.55□□□□□ -0.88
NUP50-208ENST00000430547 TRBV7-7A0A0K0K1E9 115 aa9.54□□□□□ -0.88
NUP50-208ENST00000430547 CEND1Q8N111 149 aa9.54□□□□□ -0.88
NUP50-208ENST00000430547 PRO1854Q9UHT4 67 aa9.51□□□□□ -0.89
NUP50-208ENST00000430547 H3BUT2 72 aa9.5□□□□□ -0.89
NUP50-208ENST00000430547 GHRHP01286 108 aa9.48□□□□□ -0.89
NUP50-208ENST00000430547 FAM218AQ96MZ4 157 aa9.48□□□□□ -0.89
NUP50-208ENST00000430547 FXYD2P54710 66 aa9.46□□□□□ -0.9
NUP50-208ENST00000430547 NDUFV3P56181 108 aaKnown RBP9.46□□□□□ -0.9
NUP50-208ENST00000430547 RPL37P61927 97 aaKnown RBP9.46□□□□□ -0.9
NUP50-208ENST00000430547 KRTAP9-2Q9BYQ4 174 aa9.46□□□□□ -0.9
NUP50-208ENST00000430547 A0A1B0GX51 115 aa9.45□□□□□ -0.9
NUP50-208ENST00000430547 LST1O00453 97 aa9.45□□□□□ -0.9
NUP50-208ENST00000430547 SS18L2Q9UHA2 77 aa9.45□□□□□ -0.9
NUP50-208ENST00000430547 FABP2P12104 132 aa9.43□□□□□ -0.9
NUP50-208ENST00000430547 HSD52Q0P140 79 aa9.43□□□□□ -0.9
NUP50-208ENST00000430547 PYY3Q5JQD4 70 aa9.43□□□□□ -0.9
NUP50-208ENST00000430547 TRIAP1O43715 76 aa9.41□□□□□ -0.9
NUP50-208ENST00000430547 Q6Q795 121 aa9.41□□□□□ -0.9
NUP50-208ENST00000430547 TEN1Q86WV5 123 aa9.41□□□□□ -0.9
NUP50-208ENST00000430547 H3BMG7 143 aa9.4□□□□□ -0.9
NUP50-208ENST00000430547 DNAL4O96015 105 aa9.4□□□□□ -0.9
NUP50-208ENST00000430547 PSMB2P49721 201 aa9.4□□□□□ -0.9
NUP50-208ENST00000430547 TMA7Q9Y2S6 64 aaKnown RBP9.4□□□□□ -0.9
NUP50-208ENST00000430547 OBSCN-AS1Q96MR7 158 aa9.38□□□□□ -0.91
NUP50-208ENST00000430547 K7ERJ3 54 aa9.36□□□□□ -0.91
NUP50-208ENST00000430547 COX6CP09669 75 aa9.36□□□□□ -0.91
NUP50-208ENST00000430547 A0A087WSZ3 146 aa9.35□□□□□ -0.91
NUP50-208ENST00000430547 ORMDL1Q9P0S3 153 aa9.35□□□□□ -0.91
NUP50-208ENST00000430547 UQCR10Q9UDW1 63 aa9.35□□□□□ -0.91
NUP50-208ENST00000430547 H3BQ85 93 aa9.34□□□□□ -0.91
NUP50-208ENST00000430547 LCE2CQ5TA81 110 aa9.34□□□□□ -0.91
NUP50-208ENST00000430547 KRTAP19-2Q3LHN2 52 aa9.33□□□□□ -0.92
NUP50-208ENST00000430547 ATP11AUNQ6ZP68 121 aa9.33□□□□□ -0.92
NUP50-208ENST00000430547 Q75L30 129 aa9.31□□□□□ -0.92
NUP50-208ENST00000430547 Q96NJ1 140 aa9.31□□□□□ -0.92
NUP50-208ENST00000430547 COX6B2Q6YFQ2 88 aa9.3□□□□□ -0.92
NUP50-208ENST00000430547 ANKRD29Q8N6D5 301 aa9.3□□□□□ -0.92
NUP50-208ENST00000430547 A0A1B0GV72 72 aa9.29□□□□□ -0.92
NUP50-208ENST00000430547 TMEM256-PLSCR3K7ERE1 68 aa9.29□□□□□ -0.92
NUP50-208ENST00000430547 A0A1W2PNM2 257 aa9.27□□□□□ -0.93
NUP50-208ENST00000430547 MT1HP80294 61 aa9.27□□□□□ -0.93
NUP50-208ENST00000430547 SIGMAR1Q99720 223 aa9.26□□□□□ -0.93
NUP50-208ENST00000430547 SCGB1C2P0DMR2 95 aa9.25□□□□□ -0.93
NUP50-208ENST00000430547 TRBV7-4A0A0J9YYF1 115 aa9.24□□□□□ -0.93
NUP50-208ENST00000430547 M0R2T5 61 aa9.21□□□□□ -0.94
NUP50-208ENST00000430547 TRACP01848 142 aa9.21□□□□□ -0.94
NUP50-208ENST00000430547 CCKP06307 115 aa9.21□□□□□ -0.94
NUP50-208ENST00000430547 UBE2V1Q13404 147 aa9.21□□□□□ -0.94
NUP50-208ENST00000430547 C20orf166-AS1Q96NR2 134 aa9.2□□□□□ -0.94
NUP50-208ENST00000430547 IGKV4-1P06312 121 aa9.19□□□□□ -0.94
NUP50-208ENST00000430547 DSCR10P59022 87 aa9.19□□□□□ -0.94
NUP50-208ENST00000430547 A8MUU9 505 aa9.18□□□□□ -0.94
NUP50-208ENST00000430547 LCE2DQ5TA82 110 aaPredicted RBP9.16□□□□□ -0.94
NUP50-208ENST00000430547 VPS25Q9BRG1 176 aa9.16□□□□□ -0.94
NUP50-208ENST00000430547 LINC00313P59037 77 aa9.15□□□□□ -0.94
NUP50-208ENST00000430547 RBM3P98179 157 aaKnown RBP9.15□□□□□ -0.94
NUP50-208ENST00000430547 DSCR8Q96T75 97 aa9.15□□□□□ -0.94
NUP50-208ENST00000430547 KRTAP9-6A0A140TA67 174 aa9.14□□□□□ -0.95
NUP50-208ENST00000430547 M0R143 59 aa9.14□□□□□ -0.95
NUP50-208ENST00000430547 DEFB116Q30KQ4 102 aa9.13□□□□□ -0.95
NUP50-208ENST00000430547 BAALC-AS2P0C853 105 aa9.1□□□□□ -0.95
NUP50-208ENST00000430547 KRTAP10-6P60371 365 aaPredicted RBP9.1□□□□□ -0.95
NUP50-208ENST00000430547 LINC00472Q9H8W2 130 aa9.1□□□□□ -0.95
NUP50-208ENST00000430547 TRBV20-1A0A075B6N2 111 aa9.09□□□□□ -0.95
NUP50-208ENST00000430547 IGHV6-1A0A0B4J1U7 121 aa9.08□□□□□ -0.96
NUP50-208ENST00000430547 C9JAW5 83 aa9.08□□□□□ -0.96
NUP50-208ENST00000430547 LORP23490 312 aaPredicted RBP9.08□□□□□ -0.96
NUP50-208ENST00000430547 ATXN8Q156A1 80 aa9.07□□□□□ -0.96
NUP50-208ENST00000430547 C21orf62-AS1Q17RA5 79 aa9.07□□□□□ -0.96
NUP50-208ENST00000430547 SMIM6P0DI80 62 aa9.06□□□□□ -0.96
NUP50-208ENST00000430547 FLGP20930 4061 aaPredicted RBP9.05□□□□□ -0.96
NUP50-208ENST00000430547 KRTAP16-1A8MUX0 517 aa9.05□□□□□ -0.96
NUP50-208ENST00000430547 NAA38Q9BRA0 125 aaKnown RBP9.05□□□□□ -0.96
NUP50-208ENST00000430547 NOTCH2NLQ7Z3S9 236 aa9.03□□□□□ -0.96
NUP50-208ENST00000430547 C8orf87E5RJ46 101 aa9.02□□□□□ -0.97
NUP50-208ENST00000430547 JMJD7-PLA2G4BH0Y9G9 81 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms