RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 IGLV7-46A0A075B6I9 117 aa3.28□□□□□ -1.88
RIF1-203ENST00000428287 RPL37AP8A6NKH3 93 aa3.27□□□□□ -1.89
RIF1-203ENST00000428287 KRTAP1-3Q8IUG1 177 aa3.27□□□□□ -1.89
RIF1-203ENST00000428287 A0A087X002 238 aa3.26□□□□□ -1.89
RIF1-203ENST00000428287 RBM12B-AS1Q9P1G2 102 aa3.26□□□□□ -1.89
RIF1-203ENST00000428287 LRCOL1A6NCL2 159 aa3.26□□□□□ -1.89
RIF1-203ENST00000428287 MRPL55Q7Z7F7 128 aaKnown RBP3.26□□□□□ -1.89
RIF1-203ENST00000428287 MP68P56378 58 aa3.26□□□□□ -1.89
RIF1-203ENST00000428287 KHDC1LQ5JSQ8 128 aa3.26□□□□□ -1.89
RIF1-203ENST00000428287 C7orf33Q8WU49 177 aa3.26□□□□□ -1.89
RIF1-203ENST00000428287 LINC00472Q9H8W2 130 aa3.26□□□□□ -1.89
RIF1-203ENST00000428287 FAM30AQ9NZY2 134 aa3.26□□□□□ -1.89
RIF1-203ENST00000428287 CMYA5Q8N3K9 4069 aa3.26□□□□□ -1.89
RIF1-203ENST00000428287 CAMK2N2Q96S95 79 aa3.25□□□□□ -1.89
RIF1-203ENST00000428287 FRAS1Q86XX4 4008 aa3.25□□□□□ -1.89
RIF1-203ENST00000428287 NDUFS5O43920 106 aa3.25□□□□□ -1.89
RIF1-203ENST00000428287 CDC42SE1Q9NRR8 79 aa3.25□□□□□ -1.89
RIF1-203ENST00000428287 DNAJC9-AS1A6NH13 148 aa3.24□□□□□ -1.89
RIF1-203ENST00000428287 SPRR1BP22528 89 aa3.24□□□□□ -1.89
RIF1-203ENST00000428287 SPART-AS1P0CW21 52 aa3.23□□□□□ -1.89
RIF1-203ENST00000428287 Q6ZR54 194 aa3.23□□□□□ -1.89
RIF1-203ENST00000428287 LINC01556Q5JQF7 62 aa3.23□□□□□ -1.89
RIF1-203ENST00000428287 KRTAP7-1Q8IUC3 87 aa3.23□□□□□ -1.89
RIF1-203ENST00000428287 LINC01558Q9Y6Z2 57 aa3.23□□□□□ -1.89
RIF1-203ENST00000428287 MAPK1IP1LQ8NDC0 245 aa3.23□□□□□ -1.89
RIF1-203ENST00000428287 LINC00476Q8WZB0 136 aa3.23□□□□□ -1.89
RIF1-203ENST00000428287 CHKB-CPT1BH3BT56 60 aa3.23□□□□□ -1.89
RIF1-203ENST00000428287 IGLV1-50A0A075B6I6 118 aa3.22□□□□□ -1.89
RIF1-203ENST00000428287 SERTAD4-AS1Q5TG53 156 aa3.22□□□□□ -1.89
RIF1-203ENST00000428287 DNAH10OSP0CZ25 163 aa3.22□□□□□ -1.89
RIF1-203ENST00000428287 C7orf65Q6ZTY9 151 aa3.22□□□□□ -1.89
RIF1-203ENST00000428287 H0Y9J4 135 aa3.22□□□□□ -1.89
RIF1-203ENST00000428287 DNAH3Q8TD57 4116 aa3.22□□□□□ -1.89
RIF1-203ENST00000428287 IGFL1Q6UW32 110 aa3.21□□□□□ -1.9
RIF1-203ENST00000428287 A6NED7 52 aa3.21□□□□□ -1.9
RIF1-203ENST00000428287 A8MWP4 228 aa3.2□□□□□ -1.9
RIF1-203ENST00000428287 KRTAP1-1Q07627 177 aa3.2□□□□□ -1.9
RIF1-203ENST00000428287 TP53AIP1Q9HCN2 124 aa3.2□□□□□ -1.9
RIF1-203ENST00000428287 H0Y9P7 68 aa3.2□□□□□ -1.9
RIF1-203ENST00000428287 DEFB113Q30KQ7 82 aa3.2□□□□□ -1.9
RIF1-203ENST00000428287 RETNQ9HD89 108 aa3.2□□□□□ -1.9
RIF1-203ENST00000428287 DNAH10Q8IVF4 4471 aa3.2□□□□□ -1.9
RIF1-203ENST00000428287 APOC4P55056 127 aa3.2□□□□□ -1.9
RIF1-203ENST00000428287 PRR4Q16378 134 aa3.2□□□□□ -1.9
RIF1-203ENST00000428287 DEFB135Q30KP9 77 aa3.2□□□□□ -1.9
RIF1-203ENST00000428287 WFDC10BQ8IUB3 73 aa3.19□□□□□ -1.9
RIF1-203ENST00000428287 NKAPP1Q8N9T2 125 aa3.19□□□□□ -1.9
RIF1-203ENST00000428287 KMT2AQ03164 3969 aa3.19□□□□□ -1.9
RIF1-203ENST00000428287 COA5Q86WW8 74 aa3.19□□□□□ -1.9
RIF1-203ENST00000428287 MOBPQ13875 183 aa3.18□□□□□ -1.9
RIF1-203ENST00000428287 A0A087WSZ3 146 aa3.18□□□□□ -1.9
RIF1-203ENST00000428287 DEFB131BA0A096LNP1 70 aa3.18□□□□□ -1.9
RIF1-203ENST00000428287 CASC2Q6XLA1 102 aa3.18□□□□□ -1.9
RIF1-203ENST00000428287 DEFB105AQ8NG35 78 aa3.17□□□□□ -1.9
RIF1-203ENST00000428287 MMP24-AS1A0A0U1RRL7 71 aa3.17□□□□□ -1.9
RIF1-203ENST00000428287 KRTAP10-9P60411 292 aa3.17□□□□□ -1.9
RIF1-203ENST00000428287 PRB1P04280 392 aa3.17□□□□□ -1.9
RIF1-203ENST00000428287 RTL8CO15255 209 aa3.16□□□□□ -1.9
RIF1-203ENST00000428287 PLA2G1BP04054 148 aaKnown RBP3.16□□□□□ -1.9
RIF1-203ENST00000428287 KRTAP13-3Q3SY46 172 aa3.16□□□□□ -1.9
RIF1-203ENST00000428287 IGKV2-24A0A0C4DH68 120 aa3.16□□□□□ -1.9
RIF1-203ENST00000428287 PRR15LQ9BU68 103 aa3.16□□□□□ -1.9
RIF1-203ENST00000428287 C8orf87E5RJ46 101 aa3.15□□□□□ -1.9
RIF1-203ENST00000428287 WFDC13Q8IUB5 93 aa3.15□□□□□ -1.91
RIF1-203ENST00000428287 SPTSSBQ8NFR3 76 aa3.15□□□□□ -1.91
RIF1-203ENST00000428287 RPL37AP61513 92 aaKnown RBP3.14□□□□□ -1.91
RIF1-203ENST00000428287 DEFB4AO15263 64 aa3.14□□□□□ -1.91
RIF1-203ENST00000428287 C4orf48Q5BLP8 95 aa3.14□□□□□ -1.91
RIF1-203ENST00000428287 FAM168BA1KXE4 195 aa3.13□□□□□ -1.91
RIF1-203ENST00000428287 PRR26Q8N8Z3 221 aa3.13□□□□□ -1.91
RIF1-203ENST00000428287 DNAH9Q9NYC9 4486 aa3.13□□□□□ -1.91
RIF1-203ENST00000428287 SPINK7P58062 85 aa3.13□□□□□ -1.91
RIF1-203ENST00000428287 C11orf45Q8TAV5 145 aa3.13□□□□□ -1.91
RIF1-203ENST00000428287 REG3GQ6UW15 175 aa3.13□□□□□ -1.91
RIF1-203ENST00000428287 SPAG11AQ6PDA7 123 aa3.12□□□□□ -1.91
RIF1-203ENST00000428287 HRES1P13985 223 aa3.12□□□□□ -1.91
RIF1-203ENST00000428287 SPATA8Q6RVD6 105 aa3.12□□□□□ -1.91
RIF1-203ENST00000428287 KRTAP13-1Q8IUC0 172 aa3.12□□□□□ -1.91
RIF1-203ENST00000428287 DEFB116Q30KQ4 102 aa3.12□□□□□ -1.91
RIF1-203ENST00000428287 Q96NJ1 140 aa3.12□□□□□ -1.91
RIF1-203ENST00000428287 KRTAP10-3P60369 221 aa3.11□□□□□ -1.91
RIF1-203ENST00000428287 HUWE1Q7Z6Z7 4374 aaKnown RBP3.11□□□□□ -1.91
RIF1-203ENST00000428287 LINC00313P59037 77 aa3.11□□□□□ -1.91
RIF1-203ENST00000428287 LINC01554Q52M75 96 aa3.11□□□□□ -1.91
RIF1-203ENST00000428287 A0A0G2JQZ4 141 aa3.1□□□□□ -1.91
RIF1-203ENST00000428287 A0A1W2PNN7 141 aa3.1□□□□□ -1.91
RIF1-203ENST00000428287 CHTF8P0CG12 524 aa3.1□□□□□ -1.91
RIF1-203ENST00000428287 MDFIQ99750 246 aa3.1□□□□□ -1.91
RIF1-203ENST00000428287 VPS13BQ7Z7G8 4022 aa3.1□□□□□ -1.91
RIF1-203ENST00000428287 HTN3P15516 51 aa3.09□□□□□ -1.91
RIF1-203ENST00000428287 PRLHP81277 87 aa3.09□□□□□ -1.92
RIF1-203ENST00000428287 DMAC1Q96GE9 116 aa3.08□□□□□ -1.92
RIF1-203ENST00000428287 DNAH6Q9C0G6 4158 aa3.08□□□□□ -1.92
RIF1-203ENST00000428287 C8orf17Q9NRJ1 99 aa3.07□□□□□ -1.92
RIF1-203ENST00000428287 A0A1B0GVX0 72 aa3.07□□□□□ -1.92
RIF1-203ENST00000428287 KRTAP11-1Q8IUC1 163 aa3.07□□□□□ -1.92
RIF1-203ENST00000428287 A0A096LNI7 61 aa3.06□□□□□ -1.92
RIF1-203ENST00000428287 PRKDCP78527 4128 aaKnown RBP3.06□□□□□ -1.92
RIF1-203ENST00000428287 WWC2-AS2Q96NR7 200 aa3.06□□□□□ -1.92
RIF1-203ENST00000428287 MRPL34Q9BQ48 92 aaKnown RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms