RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 LCE2DQ5TA82 110 aaPredicted RBP9.66□□□□□ -0.86
GPC1-203ENST00000425056 KRTAP19-2Q3LHN2 52 aa9.65□□□□□ -0.86
GPC1-203ENST00000425056 TEX49A0A1B0GTD5 131 aa9.64□□□□□ -0.87
GPC1-203ENST00000425056 PCOTHQ58A44 107 aa9.64□□□□□ -0.87
GPC1-203ENST00000425056 A6NDN8 102 aa9.63□□□□□ -0.87
GPC1-203ENST00000425056 C9orf92A6NGG3 77 aa9.63□□□□□ -0.87
GPC1-203ENST00000425056 M0R143 59 aa9.63□□□□□ -0.87
GPC1-203ENST00000425056 FXYD2P54710 66 aa9.63□□□□□ -0.87
GPC1-203ENST00000425056 DEFB105AQ8NG35 78 aa9.63□□□□□ -0.87
GPC1-203ENST00000425056 A0A0B4J2C4 111 aa9.62□□□□□ -0.87
GPC1-203ENST00000425056 A0A1B0GWB2 263 aa9.62□□□□□ -0.87
GPC1-203ENST00000425056 Q5XG85 94 aa9.62□□□□□ -0.87
GPC1-203ENST00000425056 IGLV5-48A0A075B6I7 105 aa9.61□□□□□ -0.87
GPC1-203ENST00000425056 H7C2G1 150 aa9.61□□□□□ -0.87
GPC1-203ENST00000425056 SMIM29Q86T20 159 aa9.61□□□□□ -0.87
GPC1-203ENST00000425056 RAB37Q96AX2 223 aa9.61□□□□□ -0.87
GPC1-203ENST00000425056 IGLV8-61A0A075B6I0 122 aa9.6□□□□□ -0.87
GPC1-203ENST00000425056 CFC1BP0CG36 223 aa9.6□□□□□ -0.87
GPC1-203ENST00000425056 CFC1P0CG37 223 aa9.6□□□□□ -0.87
GPC1-203ENST00000425056 BVES-AS1Q5T3Y7 98 aa9.59□□□□□ -0.87
GPC1-203ENST00000425056 NHP2Q9NX24 153 aaKnown RBP9.58□□□□□ -0.88
GPC1-203ENST00000425056 MT1HP80294 61 aa9.57□□□□□ -0.88
GPC1-203ENST00000425056 PRO1854Q9UHT4 67 aa9.57□□□□□ -0.88
GPC1-203ENST00000425056 C1orf195Q5TG92 126 aa9.56□□□□□ -0.88
GPC1-203ENST00000425056 A0A0G2JQZ4 141 aa9.53□□□□□ -0.88
GPC1-203ENST00000425056 SMIM11BQ8TCY0 68 aa9.53□□□□□ -0.88
GPC1-203ENST00000425056 K7ERJ3 54 aa9.5□□□□□ -0.89
GPC1-203ENST00000425056 VAMP3Q15836 100 aa9.5□□□□□ -0.89
GPC1-203ENST00000425056 PCP4L1A6NKN8 68 aa9.49□□□□□ -0.89
GPC1-203ENST00000425056 RPL37P61927 97 aaKnown RBP9.49□□□□□ -0.89
GPC1-203ENST00000425056 BATFQ16520 125 aa9.49□□□□□ -0.89
GPC1-203ENST00000425056 CRCT1Q9UGL9 99 aa9.48□□□□□ -0.89
GPC1-203ENST00000425056 TCL1BO95988 128 aa9.46□□□□□ -0.9
GPC1-203ENST00000425056 FSIP2Q5CZC0 6907 aa9.43□□□□□ -0.9
GPC1-203ENST00000425056 F8WEM9 126 aa9.43□□□□□ -0.9
GPC1-203ENST00000425056 H0YGX0 51 aa9.43□□□□□ -0.9
GPC1-203ENST00000425056 COX6CP09669 75 aa9.43□□□□□ -0.9
GPC1-203ENST00000425056 LORP23490 312 aaPredicted RBP9.43□□□□□ -0.9
GPC1-203ENST00000425056 PSMB2P49721 201 aa9.43□□□□□ -0.9
GPC1-203ENST00000425056 SNHG12Q9BXW3 62 aa9.43□□□□□ -0.9
GPC1-203ENST00000425056 LINC00575Q6W349 94 aa9.42□□□□□ -0.9
GPC1-203ENST00000425056 TRIAP1O43715 76 aa9.41□□□□□ -0.9
GPC1-203ENST00000425056 KRTAP10-6P60371 365 aaPredicted RBP9.41□□□□□ -0.9
GPC1-203ENST00000425056 SNCGO76070 127 aa9.4□□□□□ -0.9
GPC1-203ENST00000425056 Q6ZQY7 126 aa9.4□□□□□ -0.9
GPC1-203ENST00000425056 Q6JHZ5 121 aa9.39□□□□□ -0.91
GPC1-203ENST00000425056 hADV29S1A0JD25 119 aa9.38□□□□□ -0.91
GPC1-203ENST00000425056 COL5A1-AS1Q5SY13 56 aa9.38□□□□□ -0.91
GPC1-203ENST00000425056 CLEC2BQ92478 149 aa9.38□□□□□ -0.91
GPC1-203ENST00000425056 TRBV7-7A0A0K0K1E9 115 aa9.36□□□□□ -0.91
GPC1-203ENST00000425056 A0A1B0GX51 115 aa9.36□□□□□ -0.91
GPC1-203ENST00000425056 SCGB1C2P0DMR2 95 aa9.36□□□□□ -0.91
GPC1-203ENST00000425056 LYRM7Q5U5X0 104 aa9.36□□□□□ -0.91
GPC1-203ENST00000425056 IGFL1Q6UW32 110 aa9.36□□□□□ -0.91
GPC1-203ENST00000425056 COX6B2Q6YFQ2 88 aa9.36□□□□□ -0.91
GPC1-203ENST00000425056 FLGP20930 4061 aaPredicted RBP9.36□□□□□ -0.91
GPC1-203ENST00000425056 C9orf118A6NHY6 69 aa9.34□□□□□ -0.91
GPC1-203ENST00000425056 TAX1BP3O14907 124 aa9.34□□□□□ -0.91
GPC1-203ENST00000425056 M0R2T5 61 aa9.33□□□□□ -0.92
GPC1-203ENST00000425056 H3BUT2 72 aa9.32□□□□□ -0.92
GPC1-203ENST00000425056 OCIAD2Q56VL3 154 aa9.32□□□□□ -0.92
GPC1-203ENST00000425056 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.32□□□□□ -0.92
GPC1-203ENST00000425056 NAA38Q9BRA0 125 aaKnown RBP9.32□□□□□ -0.92
GPC1-203ENST00000425056 PPDPFLQ8WWR9 84 aa9.31□□□□□ -0.92
GPC1-203ENST00000425056 FAM218AQ96MZ4 157 aa9.31□□□□□ -0.92
GPC1-203ENST00000425056 GHRHP01286 108 aa9.3□□□□□ -0.92
GPC1-203ENST00000425056 Q75L30 129 aa9.29□□□□□ -0.92
GPC1-203ENST00000425056 TRBV20-1A0A075B6N2 111 aa9.28□□□□□ -0.92
GPC1-203ENST00000425056 DNAL4O96015 105 aa9.28□□□□□ -0.92
GPC1-203ENST00000425056 OBSCN-AS1Q96MR7 158 aa9.28□□□□□ -0.92
GPC1-203ENST00000425056 A0A1W2PPM0 123 aa9.27□□□□□ -0.93
GPC1-203ENST00000425056 LST1O00453 97 aa9.27□□□□□ -0.93
GPC1-203ENST00000425056 TRACP01848 142 aa9.27□□□□□ -0.93
GPC1-203ENST00000425056 FABP2P12104 132 aa9.26□□□□□ -0.93
GPC1-203ENST00000425056 ATXN8Q156A1 80 aa9.26□□□□□ -0.93
GPC1-203ENST00000425056 H3BQ85 93 aa9.24□□□□□ -0.93
GPC1-203ENST00000425056 ATP11AUNQ6ZP68 121 aa9.24□□□□□ -0.93
GPC1-203ENST00000425056 ORMDL1Q9P0S3 153 aa9.22□□□□□ -0.93
GPC1-203ENST00000425056 Q6Q795 121 aa9.2□□□□□ -0.94
GPC1-203ENST00000425056 SS18L2Q9UHA2 77 aa9.19□□□□□ -0.94
GPC1-203ENST00000425056 SPCS1Q9Y6A9 102 aa9.19□□□□□ -0.94
GPC1-203ENST00000425056 TMEM256-PLSCR3K7ERE1 68 aa9.18□□□□□ -0.94
GPC1-203ENST00000425056 Q96NJ1 140 aa9.17□□□□□ -0.94
GPC1-203ENST00000425056 C20orf166-AS1Q96NR2 134 aa9.16□□□□□ -0.94
GPC1-203ENST00000425056 TEN1Q86WV5 123 aa9.15□□□□□ -0.94
GPC1-203ENST00000425056 C9JAW5 83 aa9.13□□□□□ -0.95
GPC1-203ENST00000425056 H3BMG7 143 aa9.13□□□□□ -0.95
GPC1-203ENST00000425056 K7EP34 96 aa9.13□□□□□ -0.95
GPC1-203ENST00000425056 BAALC-AS2P0C853 105 aa9.13□□□□□ -0.95
GPC1-203ENST00000425056 NDUFV3P56181 108 aaKnown RBP9.13□□□□□ -0.95
GPC1-203ENST00000425056 UBE2V1Q13404 147 aa9.13□□□□□ -0.95
GPC1-203ENST00000425056 GTF2H5Q6ZYL4 71 aa9.13□□□□□ -0.95
GPC1-203ENST00000425056 A8MUU9 505 aa9.12□□□□□ -0.95
GPC1-203ENST00000425056 A0A087WSZ3 146 aa9.11□□□□□ -0.95
GPC1-203ENST00000425056 H3BT86 120 aa9.1□□□□□ -0.95
GPC1-203ENST00000425056 ANKRD29Q8N6D5 301 aa9.08□□□□□ -0.96
GPC1-203ENST00000425056 JMJD7-PLA2G4BH0Y9G9 81 aa9.04□□□□□ -0.96
GPC1-203ENST00000425056 MTURNQ8N3F0 131 aa9.03□□□□□ -0.96
GPC1-203ENST00000425056 A0A1W2PNM2 257 aa9.02□□□□□ -0.97
GPC1-203ENST00000425056 DSCR10P59022 87 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms