RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 K7ERJ3 54 aa8.57□□□□□ -1.04
USB1-202ENST00000423271 SLC25A20O43772 301 aa8.57□□□□□ -1.04
USB1-202ENST00000423271 BVES-AS1Q5T3Y7 98 aa8.57□□□□□ -1.04
USB1-202ENST00000423271 LINC01547P58512 204 aaPredicted RBP8.56□□□□□ -1.04
USB1-202ENST00000423271 IGLV5-48A0A075B6I7 105 aa8.55□□□□□ -1.04
USB1-202ENST00000423271 hADV29S1A0JD25 119 aa8.55□□□□□ -1.04
USB1-202ENST00000423271 KRTAP13-3Q3SY46 172 aa8.55□□□□□ -1.04
USB1-202ENST00000423271 SSBP3-AS1Q7Z2R9 100 aa8.55□□□□□ -1.04
USB1-202ENST00000423271 TEX49A0A1B0GTD5 131 aa8.54□□□□□ -1.04
USB1-202ENST00000423271 LCE2CQ5TA81 110 aa8.54□□□□□ -1.04
USB1-202ENST00000423271 C9orf153Q5TBE3 101 aa8.54□□□□□ -1.04
USB1-202ENST00000423271 Q6ZQY7 126 aa8.53□□□□□ -1.04
USB1-202ENST00000423271 Q8N377 158 aa8.53□□□□□ -1.04
USB1-202ENST00000423271 LAMTOR3Q9UHA4 124 aa8.53□□□□□ -1.04
USB1-202ENST00000423271 RPS29P62273 56 aaKnown RBP8.52□□□□□ -1.05
USB1-202ENST00000423271 SMIM29Q86T20 159 aa8.52□□□□□ -1.05
USB1-202ENST00000423271 TSTD3H0UI37 97 aa8.51□□□□□ -1.05
USB1-202ENST00000423271 H0YGX0 51 aa8.51□□□□□ -1.05
USB1-202ENST00000423271 TRIAP1O43715 76 aa8.51□□□□□ -1.05
USB1-202ENST00000423271 FAM218AQ96MZ4 157 aa8.51□□□□□ -1.05
USB1-202ENST00000423271 LCE2AQ5TA79 106 aaPredicted RBP8.5□□□□□ -1.05
USB1-202ENST00000423271 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.49□□□□□ -1.05
USB1-202ENST00000423271 M0R143 59 aa8.48□□□□□ -1.05
USB1-202ENST00000423271 PSMB2P49721 201 aa8.48□□□□□ -1.05
USB1-202ENST00000423271 CLEC2BQ92478 149 aa8.46□□□□□ -1.06
USB1-202ENST00000423271 ASB16-AS1Q495Z4 193 aa8.45□□□□□ -1.06
USB1-202ENST00000423271 SNCGO76070 127 aa8.44□□□□□ -1.06
USB1-202ENST00000423271 A0A1B0GX51 115 aa8.43□□□□□ -1.06
USB1-202ENST00000423271 COX6CP09669 75 aa8.43□□□□□ -1.06
USB1-202ENST00000423271 HRCT1Q6UXD1 115 aa8.42□□□□□ -1.06
USB1-202ENST00000423271 KRTAP4-1Q9BYQ7 146 aa8.42□□□□□ -1.06
USB1-202ENST00000423271 A0A0G2JQZ4 141 aa8.41□□□□□ -1.06
USB1-202ENST00000423271 F8WEM9 126 aa8.41□□□□□ -1.06
USB1-202ENST00000423271 PPDPFLQ8WWR9 84 aa8.41□□□□□ -1.06
USB1-202ENST00000423271 BATFQ16520 125 aa8.4□□□□□ -1.06
USB1-202ENST00000423271 OCIAD2Q56VL3 154 aa8.4□□□□□ -1.06
USB1-202ENST00000423271 SNHG12Q9BXW3 62 aa8.39□□□□□ -1.07
USB1-202ENST00000423271 SCGB1C2P0DMR2 95 aa8.38□□□□□ -1.07
USB1-202ENST00000423271 SEC61BP60468 96 aaKnown RBP8.38□□□□□ -1.07
USB1-202ENST00000423271 XP32Q5T750 250 aa8.38□□□□□ -1.07
USB1-202ENST00000423271 NAA38Q9BRA0 125 aaKnown RBP8.38□□□□□ -1.07
USB1-202ENST00000423271 KRTAP9-2Q9BYQ4 174 aa8.37□□□□□ -1.07
USB1-202ENST00000423271 IGLV8-61A0A075B6I0 122 aa8.36□□□□□ -1.07
USB1-202ENST00000423271 DNAL4O96015 105 aa8.36□□□□□ -1.07
USB1-202ENST00000423271 CD164Q04900 197 aa8.36□□□□□ -1.07
USB1-202ENST00000423271 LIMD2Q9BT23 127 aa8.36□□□□□ -1.07
USB1-202ENST00000423271 H3BUT2 72 aa8.34□□□□□ -1.07
USB1-202ENST00000423271 LST1O00453 97 aa8.34□□□□□ -1.07
USB1-202ENST00000423271 FABP2P12104 132 aa8.34□□□□□ -1.07
USB1-202ENST00000423271 Q6JHZ5 121 aa8.34□□□□□ -1.07
USB1-202ENST00000423271 IGFL1Q6UW32 110 aa8.34□□□□□ -1.07
USB1-202ENST00000423271 TRACP01848 142 aa8.33□□□□□ -1.08
USB1-202ENST00000423271 NDUFV3P56181 108 aaKnown RBP8.33□□□□□ -1.08
USB1-202ENST00000423271 ORMDL1Q9P0S3 153 aa8.33□□□□□ -1.08
USB1-202ENST00000423271 C9orf92A6NGG3 77 aa8.3□□□□□ -1.08
USB1-202ENST00000423271 LORP23490 312 aaPredicted RBP8.3□□□□□ -1.08
USB1-202ENST00000423271 H3BMG7 143 aa8.29□□□□□ -1.08
USB1-202ENST00000423271 H3BQ85 93 aa8.29□□□□□ -1.08
USB1-202ENST00000423271 TCL1BO95988 128 aa8.29□□□□□ -1.08
USB1-202ENST00000423271 TAX1BP3O14907 124 aa8.28□□□□□ -1.08
USB1-202ENST00000423271 TMEM256-PLSCR3K7ERE1 68 aa8.27□□□□□ -1.09
USB1-202ENST00000423271 ATXN8Q156A1 80 aa8.27□□□□□ -1.09
USB1-202ENST00000423271 Q5XG85 94 aa8.27□□□□□ -1.09
USB1-202ENST00000423271 A0A1B0GV72 72 aa8.26□□□□□ -1.09
USB1-202ENST00000423271 TRBV7-7A0A0K0K1E9 115 aa8.25□□□□□ -1.09
USB1-202ENST00000423271 C9orf118A6NHY6 69 aa8.25□□□□□ -1.09
USB1-202ENST00000423271 LYRM7Q5U5X0 104 aa8.25□□□□□ -1.09
USB1-202ENST00000423271 UBE2V1Q13404 147 aa8.24□□□□□ -1.09
USB1-202ENST00000423271 PCOTHQ58A44 107 aa8.24□□□□□ -1.09
USB1-202ENST00000423271 C1orf195Q5TG92 126 aa8.24□□□□□ -1.09
USB1-202ENST00000423271 BAALC-AS2P0C853 105 aa8.23□□□□□ -1.09
USB1-202ENST00000423271 PCP4L1A6NKN8 68 aa8.21□□□□□ -1.1
USB1-202ENST00000423271 Q6Q795 121 aa8.21□□□□□ -1.1
USB1-202ENST00000423271 TRBV20-1A0A075B6N2 111 aa8.2□□□□□ -1.1
USB1-202ENST00000423271 A0A1W2PPM0 123 aa8.2□□□□□ -1.1
USB1-202ENST00000423271 H3BS24 57 aa8.2□□□□□ -1.1
USB1-202ENST00000423271 TEN1Q86WV5 123 aa8.2□□□□□ -1.1
USB1-202ENST00000423271 ANKRD29Q8N6D5 301 aa8.2□□□□□ -1.1
USB1-202ENST00000423271 A0A1W2PNM2 257 aa8.19□□□□□ -1.1
USB1-202ENST00000423271 KRTAP19-2Q3LHN2 52 aa8.19□□□□□ -1.1
USB1-202ENST00000423271 COL5A1-AS1Q5SY13 56 aa8.18□□□□□ -1.1
USB1-202ENST00000423271 C9JAW5 83 aa8.17□□□□□ -1.1
USB1-202ENST00000423271 A0A087WSZ3 146 aa8.16□□□□□ -1.1
USB1-202ENST00000423271 TRBV7-4A0A0J9YYF1 115 aa8.15□□□□□ -1.1
USB1-202ENST00000423271 RBM3P98179 157 aaKnown RBP8.15□□□□□ -1.1
USB1-202ENST00000423271 CCKP06307 115 aa8.13□□□□□ -1.11
USB1-202ENST00000423271 RPL37P61927 97 aaKnown RBP8.13□□□□□ -1.11
USB1-202ENST00000423271 SS18L2Q9UHA2 77 aa8.13□□□□□ -1.11
USB1-202ENST00000423271 MTURNQ8N3F0 131 aa8.11□□□□□ -1.11
USB1-202ENST00000423271 DSCR8Q96T75 97 aa8.11□□□□□ -1.11
USB1-202ENST00000423271 VPS25Q9BRG1 176 aa8.11□□□□□ -1.11
USB1-202ENST00000423271 SPCS1Q9Y6A9 102 aa8.11□□□□□ -1.11
USB1-202ENST00000423271 KRTAP9-6A0A140TA67 174 aa8.1□□□□□ -1.11
USB1-202ENST00000423271 MT1HP80294 61 aa8.1□□□□□ -1.11
USB1-202ENST00000423271 JMJD7-PLA2G4BH0Y9G9 81 aa8.09□□□□□ -1.11
USB1-202ENST00000423271 H3BT86 120 aa8.08□□□□□ -1.12
USB1-202ENST00000423271 Q96NJ1 140 aa8.08□□□□□ -1.12
USB1-202ENST00000423271 FLGP20930 4061 aaPredicted RBP8.08□□□□□ -1.12
USB1-202ENST00000423271 OBSCN-AS1Q96MR7 158 aa8.06□□□□□ -1.12
USB1-202ENST00000423271 C14orf132Q9NPU4 83 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms