RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 MUC17Q685J3 4493 aa14.76□□□□□ -0.05
CDK9-202ENST00000421939 TMEM238LA0A1B0GVL6 79 aa14.75□□□□□ -0.05
CDK9-202ENST00000421939 A6NJY4 79 aa14.75□□□□□ -0.05
CDK9-202ENST00000421939 F8WEM9 126 aa14.74□□□□□ -0.05
CDK9-202ENST00000421939 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.74□□□□□ -0.05
CDK9-202ENST00000421939 A0A0G2JQZ4 141 aa14.71□□□□□ -0.05
CDK9-202ENST00000421939 FXYD2P54710 66 aa14.71□□□□□ -0.05
CDK9-202ENST00000421939 PRO1854Q9UHT4 67 aa14.68□□□□□ -0.06
CDK9-202ENST00000421939 HSD52Q0P140 79 aa14.67□□□□□ -0.06
CDK9-202ENST00000421939 Q5XG85 94 aa14.67□□□□□ -0.06
CDK9-202ENST00000421939 PPDPFLQ8WWR9 84 aa14.67□□□□□ -0.06
CDK9-202ENST00000421939 H0YGX0 51 aa14.66□□□□□ -0.06
CDK9-202ENST00000421939 IGLV8-61A0A075B6I0 122 aa14.63□□□□□ -0.07
CDK9-202ENST00000421939 SNCGO76070 127 aa14.63□□□□□ -0.07
CDK9-202ENST00000421939 Q6JHZ5 121 aa14.62□□□□□ -0.07
CDK9-202ENST00000421939 FAM218AQ96MZ4 157 aa14.62□□□□□ -0.07
CDK9-202ENST00000421939 UQCR10Q9UDW1 63 aa14.62□□□□□ -0.07
CDK9-202ENST00000421939 OCIAD2Q56VL3 154 aa14.59□□□□□ -0.07
CDK9-202ENST00000421939 CLEC2BQ92478 149 aa14.59□□□□□ -0.07
CDK9-202ENST00000421939 SNHG12Q9BXW3 62 aa14.59□□□□□ -0.07
CDK9-202ENST00000421939 A0A0U1RQV1 116 aa14.57□□□□□ -0.08
CDK9-202ENST00000421939 IGFL1Q6UW32 110 aa14.57□□□□□ -0.08
CDK9-202ENST00000421939 TRIAP1O43715 76 aa14.56□□□□□ -0.08
CDK9-202ENST00000421939 ASB16-AS1Q495Z4 193 aa14.56□□□□□ -0.08
CDK9-202ENST00000421939 K7ERJ3 54 aa14.55□□□□□ -0.08
CDK9-202ENST00000421939 C1orf195Q5TG92 126 aa14.55□□□□□ -0.08
CDK9-202ENST00000421939 A0A1B0GX51 115 aa14.54□□□□□ -0.08
CDK9-202ENST00000421939 TCL1BO95988 128 aa14.54□□□□□ -0.08
CDK9-202ENST00000421939 XP32Q5T750 250 aa14.54□□□□□ -0.08
CDK9-202ENST00000421939 SEC61BP60468 96 aaKnown RBP14.52□□□□□ -0.09
CDK9-202ENST00000421939 H3BUT2 72 aa14.51□□□□□ -0.09
CDK9-202ENST00000421939 TRBV7-7A0A0K0K1E9 115 aa14.5□□□□□ -0.09
CDK9-202ENST00000421939 C9orf92A6NGG3 77 aa14.48□□□□□ -0.09
CDK9-202ENST00000421939 PSMB2P49721 201 aa14.47□□□□□ -0.09
CDK9-202ENST00000421939 FAT4Q6V0I7 4981 aa14.46□□□□□ -0.09
CDK9-202ENST00000421939 GHRHP01286 108 aa14.46□□□□□ -0.09
CDK9-202ENST00000421939 NDUFV3P56181 108 aaKnown RBP14.45□□□□□ -0.1
CDK9-202ENST00000421939 COX6CP09669 75 aa14.41□□□□□ -0.1
CDK9-202ENST00000421939 FABP2P12104 132 aa14.41□□□□□ -0.1
CDK9-202ENST00000421939 DNAL4O96015 105 aa14.4□□□□□ -0.1
CDK9-202ENST00000421939 H3BMG7 143 aa14.36□□□□□ -0.11
CDK9-202ENST00000421939 SMIM6P0DI80 62 aa14.36□□□□□ -0.11
CDK9-202ENST00000421939 Q6Q795 121 aa14.35□□□□□ -0.11
CDK9-202ENST00000421939 ORMDL1Q9P0S3 153 aa14.35□□□□□ -0.11
CDK9-202ENST00000421939 KRTAP4-1Q9BYQ7 146 aa14.34□□□□□ -0.11
CDK9-202ENST00000421939 H3BQ85 93 aa14.32□□□□□ -0.12
CDK9-202ENST00000421939 TEN1Q86WV5 123 aa14.32□□□□□ -0.12
CDK9-202ENST00000421939 SS18L2Q9UHA2 77 aa14.3□□□□□ -0.12
CDK9-202ENST00000421939 LST1O00453 97 aa14.29□□□□□ -0.12
CDK9-202ENST00000421939 M0R143 59 aa14.27□□□□□ -0.13
CDK9-202ENST00000421939 PCOTHQ58A44 107 aa14.27□□□□□ -0.13
CDK9-202ENST00000421939 TMEM256-PLSCR3K7ERE1 68 aa14.26□□□□□ -0.13
CDK9-202ENST00000421939 SCGB1C2P0DMR2 95 aa14.26□□□□□ -0.13
CDK9-202ENST00000421939 TRACP01848 142 aa14.25□□□□□ -0.13
CDK9-202ENST00000421939 A0A087WSZ3 146 aa14.24□□□□□ -0.13
CDK9-202ENST00000421939 A0A1B0GV72 72 aa14.22□□□□□ -0.13
CDK9-202ENST00000421939 LCE2AQ5TA79 106 aaPredicted RBP14.22□□□□□ -0.13
CDK9-202ENST00000421939 A0A1W2PNM2 257 aa14.21□□□□□ -0.13
CDK9-202ENST00000421939 RPL37P61927 97 aaKnown RBP14.2□□□□□ -0.14
CDK9-202ENST00000421939 ANKRD29Q8N6D5 301 aa14.2□□□□□ -0.14
CDK9-202ENST00000421939 UBE2V1Q13404 147 aa14.18□□□□□ -0.14
CDK9-202ENST00000421939 TSTD3H0UI37 97 aa14.14□□□□□ -0.15
CDK9-202ENST00000421939 OBSCN-AS1Q96MR7 158 aa14.14□□□□□ -0.15
CDK9-202ENST00000421939 TRBV7-4A0A0J9YYF1 115 aa14.13□□□□□ -0.15
CDK9-202ENST00000421939 Q96NJ1 140 aa14.11□□□□□ -0.15
CDK9-202ENST00000421939 NAA38Q9BRA0 125 aaKnown RBP14.11□□□□□ -0.15
CDK9-202ENST00000421939 LOC105371267A0A1B0GV96 52 aa14.1□□□□□ -0.15
CDK9-202ENST00000421939 CCKP06307 115 aa14.08□□□□□ -0.16
CDK9-202ENST00000421939 BAALC-AS2P0C853 105 aa14.05□□□□□ -0.16
CDK9-202ENST00000421939 ATXN8Q156A1 80 aa14.05□□□□□ -0.16
CDK9-202ENST00000421939 RBM3P98179 157 aaKnown RBP14.03□□□□□ -0.16
CDK9-202ENST00000421939 Q75L30 129 aa14.03□□□□□ -0.16
CDK9-202ENST00000421939 SIGMAR1Q99720 223 aa14.03□□□□□ -0.16
CDK9-202ENST00000421939 BATFQ16520 125 aa14.01□□□□□ -0.17
CDK9-202ENST00000421939 DSCR8Q96T75 97 aa14□□□□□ -0.17
CDK9-202ENST00000421939 VPS25Q9BRG1 176 aa13.99□□□□□ -0.17
CDK9-202ENST00000421939 LYRM7Q5U5X0 104 aa13.98□□□□□ -0.17
CDK9-202ENST00000421939 IGKV4-1P06312 121 aa13.96□□□□□ -0.17
CDK9-202ENST00000421939 KRTAP19-2Q3LHN2 52 aa13.95□□□□□ -0.18
CDK9-202ENST00000421939 LCE2CQ5TA81 110 aa13.94□□□□□ -0.18
CDK9-202ENST00000421939 ATP11AUNQ6ZP68 121 aa13.94□□□□□ -0.18
CDK9-202ENST00000421939 LINC00472Q9H8W2 130 aa13.94□□□□□ -0.18
CDK9-202ENST00000421939 C9JAW5 83 aa13.92□□□□□ -0.18
CDK9-202ENST00000421939 DSCR10P59022 87 aa13.92□□□□□ -0.18
CDK9-202ENST00000421939 C20orf166-AS1Q96NR2 134 aa13.92□□□□□ -0.18
CDK9-202ENST00000421939 TRBV20-1A0A075B6N2 111 aa13.89□□□□□ -0.19
CDK9-202ENST00000421939 DEFB116Q30KQ4 102 aa13.89□□□□□ -0.19
CDK9-202ENST00000421939 A8MUU9 505 aa13.88□□□□□ -0.19
CDK9-202ENST00000421939 JMJD7-PLA2G4BH0Y9G9 81 aa13.88□□□□□ -0.19
CDK9-202ENST00000421939 C21orf62-AS1Q17RA5 79 aa13.85□□□□□ -0.19
CDK9-202ENST00000421939 LINC00313P59037 77 aa13.84□□□□□ -0.19
CDK9-202ENST00000421939 C9orf118A6NHY6 69 aa13.82□□□□□ -0.2
CDK9-202ENST00000421939 Q6ZQT0 140 aa13.82□□□□□ -0.2
CDK9-202ENST00000421939 LOC110117498A0A087WWA1 95 aa13.81□□□□□ -0.2
CDK9-202ENST00000421939 TAX1BP3O14907 124 aa13.81□□□□□ -0.2
CDK9-202ENST00000421939 IGHV6-1A0A0B4J1U7 121 aa13.78□□□□□ -0.2
CDK9-202ENST00000421939 KRTAP16-1A8MUX0 517 aa13.78□□□□□ -0.2
CDK9-202ENST00000421939 A0A1W2PPM0 123 aa13.77□□□□□ -0.21
CDK9-202ENST00000421939 PDE6GP18545 87 aa13.77□□□□□ -0.21
CDK9-202ENST00000421939 MT1HP80294 61 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms