RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 SPTSSBQ8NFR3 76 aa10.59□□□□□ -0.71
PKP4-204ENST00000421462 B9D2Q9BPU9 175 aa10.59□□□□□ -0.71
PKP4-204ENST00000421462 CSMD3Q7Z407 3707 aa10.59□□□□□ -0.71
PKP4-204ENST00000421462 CHKB-CPT1BH3BT56 60 aa10.59□□□□□ -0.71
PKP4-204ENST00000421462 STAB1Q9NY15 2570 aa10.58□□□□□ -0.72
PKP4-204ENST00000421462 LINC01556Q5JQF7 62 aa10.58□□□□□ -0.72
PKP4-204ENST00000421462 KMT2BQ9UMN6 2715 aaPredicted RBP10.58□□□□□ -0.72
PKP4-204ENST00000421462 REG3GQ6UW15 175 aa10.56□□□□□ -0.72
PKP4-204ENST00000421462 H0Y9P7 68 aa10.56□□□□□ -0.72
PKP4-204ENST00000421462 A0A1B0GW54 56 aa10.55□□□□□ -0.72
PKP4-204ENST00000421462 NDUFB1O75438 58 aa10.55□□□□□ -0.72
PKP4-204ENST00000421462 PRR15LQ9BU68 103 aa10.55□□□□□ -0.72
PKP4-204ENST00000421462 SPRR1AP35321 89 aa10.54□□□□□ -0.72
PKP4-204ENST00000421462 CYP4F30PQ9H0H9 118 aa10.54□□□□□ -0.72
PKP4-204ENST00000421462 C11orf45Q8TAV5 145 aa10.53□□□□□ -0.72
PKP4-204ENST00000421462 Q5VV11 94 aa10.52□□□□□ -0.73
PKP4-204ENST00000421462 CASC2Q6XLA1 102 aa10.52□□□□□ -0.73
PKP4-204ENST00000421462 NBEAL1Q6ZS30 2694 aa10.51□□□□□ -0.73
PKP4-204ENST00000421462 H3BNG1 76 aa10.49□□□□□ -0.73
PKP4-204ENST00000421462 UBE2AP49459 152 aa10.49□□□□□ -0.73
PKP4-204ENST00000421462 COL7A1Q02388 2944 aa10.49□□□□□ -0.73
PKP4-204ENST00000421462 H0Y9J4 135 aa10.49□□□□□ -0.73
PKP4-204ENST00000421462 TLX1NBP0CAT3 122 aa10.48□□□□□ -0.73
PKP4-204ENST00000421462 KRTAP10-11P60412 298 aa10.47□□□□□ -0.73
PKP4-204ENST00000421462 PCOTHQ58A44 107 aa10.47□□□□□ -0.73
PKP4-204ENST00000421462 ANK2Q01484 3957 aa10.47□□□□□ -0.73
PKP4-204ENST00000421462 PLA2G2DQ9UNK4 145 aa10.47□□□□□ -0.73
PKP4-204ENST00000421462 Q8N9P0 234 aaPredicted RBP10.46□□□□□ -0.74
PKP4-204ENST00000421462 LINC00588Q9Y4M8 146 aa10.45□□□□□ -0.74
PKP4-204ENST00000421462 A6NED7 52 aa10.44□□□□□ -0.74
PKP4-204ENST00000421462 DNAH10OSP0CZ25 163 aa10.44□□□□□ -0.74
PKP4-204ENST00000421462 C16orf90A8MZG2 172 aa10.43□□□□□ -0.74
PKP4-204ENST00000421462 IGLV5-37A0A075B6J1 123 aa10.43□□□□□ -0.74
PKP4-204ENST00000421462 CNBPP62633 177 aaKnown RBP10.42□□□□□ -0.74
PKP4-204ENST00000421462 KRTAP29-1A8MX34 341 aaPredicted RBP10.4□□□□□ -0.74
PKP4-204ENST00000421462 CHTF8P0CG12 524 aa10.39□□□□□ -0.75
PKP4-204ENST00000421462 COA5Q86WW8 74 aa10.38□□□□□ -0.75
PKP4-204ENST00000421462 LIMD2Q9BT23 127 aa10.37□□□□□ -0.75
PKP4-204ENST00000421462 SPAG11AQ6PDA7 123 aa10.37□□□□□ -0.75
PKP4-204ENST00000421462 PHF5AQ7RTV0 110 aaKnown RBP10.37□□□□□ -0.75
PKP4-204ENST00000421462 TENM2Q9NT68 2774 aa10.36□□□□□ -0.75
PKP4-204ENST00000421462 LCA10Q71F78 164 aa10.35□□□□□ -0.75
PKP4-204ENST00000421462 KRTAP11-1Q8IUC1 163 aa10.35□□□□□ -0.75
PKP4-204ENST00000421462 NDUFS5O43920 106 aa10.35□□□□□ -0.75
PKP4-204ENST00000421462 A8MWP4 228 aa10.34□□□□□ -0.75
PKP4-204ENST00000421462 DNAH10Q8IVF4 4471 aa10.33□□□□□ -0.76
PKP4-204ENST00000421462 SPANXA2-OT1Q8N9U9 137 aa10.32□□□□□ -0.76
PKP4-204ENST00000421462 IGLV9-49A0A0B4J1Y8 123 aa10.29□□□□□ -0.76
PKP4-204ENST00000421462 C9orf163Q8N9P6 203 aa10.29□□□□□ -0.76
PKP4-204ENST00000421462 LINC00472Q9H8W2 130 aa10.29□□□□□ -0.76
PKP4-204ENST00000421462 CD164Q04900 197 aa10.28□□□□□ -0.76
PKP4-204ENST00000421462 STAB2Q8WWQ8 2551 aa10.27□□□□□ -0.76
PKP4-204ENST00000421462 IGLV8-61A0A075B6I0 122 aa10.26□□□□□ -0.77
PKP4-204ENST00000421462 LYSTQ99698 3801 aa10.26□□□□□ -0.77
PKP4-204ENST00000421462 H3BPC8 53 aa10.26□□□□□ -0.77
PKP4-204ENST00000421462 KTN1-AS1Q86SY8 53 aa10.26□□□□□ -0.77
PKP4-204ENST00000421462 MMP24-AS1A0A0U1RRL7 71 aa10.25□□□□□ -0.77
PKP4-204ENST00000421462 RBM12B-AS1Q9P1G2 102 aa10.24□□□□□ -0.77
PKP4-204ENST00000421462 KRTAP1-5Q9BYS1 174 aa10.23□□□□□ -0.77
PKP4-204ENST00000421462 IGHV6-1A0A0B4J1U7 121 aa10.23□□□□□ -0.77
PKP4-204ENST00000421462 IGLV7-46A0A075B6I9 117 aa10.22□□□□□ -0.77
PKP4-204ENST00000421462 Q75L30 129 aa10.22□□□□□ -0.77
PKP4-204ENST00000421462 MGAM2Q2M2H8 2515 aa10.22□□□□□ -0.77
PKP4-204ENST00000421462 LOC101927531A0A1B0GV80 90 aa10.21□□□□□ -0.77
PKP4-204ENST00000421462 ATP11AUNQ6ZP68 121 aa10.21□□□□□ -0.78
PKP4-204ENST00000421462 SPINK7P58062 85 aa10.18□□□□□ -0.78
PKP4-204ENST00000421462 UBE2DNLQ8IWF7 75 aa10.15□□□□□ -0.78
PKP4-204ENST00000421462 CDC42SE1Q9NRR8 79 aa10.14□□□□□ -0.79
PKP4-204ENST00000421462 MOBPQ13875 183 aa10.13□□□□□ -0.79
PKP4-204ENST00000421462 K7EIL1 84 aa10.13□□□□□ -0.79
PKP4-204ENST00000421462 ANAPC11Q9NYG5 84 aa10.13□□□□□ -0.79
PKP4-204ENST00000421462 A6NN06 94 aa10.13□□□□□ -0.79
PKP4-204ENST00000421462 PRR26Q8N8Z3 221 aa10.13□□□□□ -0.79
PKP4-204ENST00000421462 HRES1P13985 223 aa10.12□□□□□ -0.79
PKP4-204ENST00000421462 PANO1I0J062 215 aa10.12□□□□□ -0.79
PKP4-204ENST00000421462 C8orf17Q9NRJ1 99 aa10.12□□□□□ -0.79
PKP4-204ENST00000421462 CDK2AP2O75956 126 aa10.11□□□□□ -0.79
PKP4-204ENST00000421462 SPINK6Q6UWN8 80 aa10.11□□□□□ -0.79
PKP4-204ENST00000421462 DNAH1Q9P2D7 4330 aa10.11□□□□□ -0.79
PKP4-204ENST00000421462 A0A087X002 238 aa10.1□□□□□ -0.79
PKP4-204ENST00000421462 NOTCH2NLQ7Z3S9 236 aa10.1□□□□□ -0.79
PKP4-204ENST00000421462 SPRR1BP22528 89 aa10.09□□□□□ -0.79
PKP4-204ENST00000421462 LINC01558Q9Y6Z2 57 aa10.08□□□□□ -0.8
PKP4-204ENST00000421462 DNAH9Q9NYC9 4486 aa10.08□□□□□ -0.8
PKP4-204ENST00000421462 Q96NJ1 140 aa10.07□□□□□ -0.8
PKP4-204ENST00000421462 TP53AIP1Q9HCN2 124 aa10.06□□□□□ -0.8
PKP4-204ENST00000421462 KRTAP24-1Q3LI83 254 aa10.05□□□□□ -0.8
PKP4-204ENST00000421462 C7orf65Q6ZTY9 151 aa10.03□□□□□ -0.8
PKP4-204ENST00000421462 A0A1B0GVX0 72 aa10.02□□□□□ -0.81
PKP4-204ENST00000421462 RETNLBQ9BQ08 111 aa10.01□□□□□ -0.81
PKP4-204ENST00000421462 MRPL34Q9BQ48 92 aaKnown RBP10.01□□□□□ -0.81
PKP4-204ENST00000421462 PRAC1Q96KF2 57 aa10.01□□□□□ -0.81
PKP4-204ENST00000421462 Q6ZR54 194 aa9.99□□□□□ -0.81
PKP4-204ENST00000421462 HUWE1Q7Z6Z7 4374 aaKnown RBP9.97□□□□□ -0.81
PKP4-204ENST00000421462 Q5W150 140 aa9.97□□□□□ -0.81
PKP4-204ENST00000421462 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.96□□□□□ -0.81
PKP4-204ENST00000421462 CMYA5Q8N3K9 4069 aa9.96□□□□□ -0.82
PKP4-204ENST00000421462 C14orf177Q52M58 125 aa9.96□□□□□ -0.82
PKP4-204ENST00000421462 PLAC8Q9NZF1 115 aa9.96□□□□□ -0.82
PKP4-204ENST00000421462 ADM2Q7Z4H4 148 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms