RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 EP300Q09472 2414 aaPredicted RBP0.94□□□□□ -2.26
HMGB1P49-201ENST00000418882 A0A096LNT2 108 aa0.94□□□□□ -2.26
HMGB1P49-201ENST00000418882 TRGV1A0A0A0MS02 117 aa0.94□□□□□ -2.26
HMGB1P49-201ENST00000418882 CHKB-CPT1BH3BT56 60 aa0.94□□□□□ -2.26
HMGB1P49-201ENST00000418882 M0R3E3 92 aa0.94□□□□□ -2.26
HMGB1P49-201ENST00000418882 NDUFA3O95167 84 aa0.94□□□□□ -2.26
HMGB1P49-201ENST00000418882 POLR2KP53803 58 aaKnown RBP0.94□□□□□ -2.26
HMGB1P49-201ENST00000418882 CCL18P55774 89 aa0.94□□□□□ -2.26
HMGB1P49-201ENST00000418882 SFTA2Q6UW10 78 aa0.94□□□□□ -2.26
HMGB1P49-201ENST00000418882 LINC00575Q6W349 94 aa0.94□□□□□ -2.26
HMGB1P49-201ENST00000418882 LINC00643Q86TS7 51 aa0.94□□□□□ -2.26
HMGB1P49-201ENST00000418882 LEAP2Q969E1 77 aa0.94□□□□□ -2.26
HMGB1P49-201ENST00000418882 KAAG1Q9UBP8 84 aa0.94□□□□□ -2.26
HMGB1P49-201ENST00000418882 TIMM8BQ9Y5J9 83 aaPredicted RBP0.94□□□□□ -2.26
HMGB1P49-201ENST00000418882 MUC3AQ02505 3323 aa0.94□□□□□ -2.26
HMGB1P49-201ENST00000418882 RELNP78509 3460 aa0.94□□□□□ -2.26
HMGB1P49-201ENST00000418882 ASPMQ8IZT6 3477 aa0.94□□□□□ -2.26
HMGB1P49-201ENST00000418882 ANK3Q12955 4377 aaKnown RBP0.94□□□□□ -2.26
HMGB1P49-201ENST00000418882 CELSR2Q9HCU4 2923 aa0.94□□□□□ -2.26
HMGB1P49-201ENST00000418882 APCP25054 2843 aa0.93□□□□□ -2.26
HMGB1P49-201ENST00000418882 ANKHD1Q8IWZ3 2542 aaKnown RBP0.93□□□□□ -2.26
HMGB1P49-201ENST00000418882 PTPRZ1P23471 2315 aaPredicted RBP0.93□□□□□ -2.26
HMGB1P49-201ENST00000418882 H3BVH4 76 aa0.93□□□□□ -2.26
HMGB1P49-201ENST00000418882 ATOX1O00244 68 aa0.93□□□□□ -2.26
HMGB1P49-201ENST00000418882 BCE1O60756 84 aa0.93□□□□□ -2.26
HMGB1P49-201ENST00000418882 COX6CP09669 75 aa0.93□□□□□ -2.26
HMGB1P49-201ENST00000418882 MUSTN1Q8IVN3 82 aa0.93□□□□□ -2.26
HMGB1P49-201ENST00000418882 CDC42SE2Q9NRR3 84 aa0.93□□□□□ -2.26
HMGB1P49-201ENST00000418882 MAP1AP78559 2803 aaPredicted RBP0.93□□□□□ -2.26
HMGB1P49-201ENST00000418882 AKAP9Q99996 3911 aa0.93□□□□□ -2.26
HMGB1P49-201ENST00000418882 CSPG4Q6UVK1 2322 aa0.93□□□□□ -2.26
HMGB1P49-201ENST00000418882 CREBBPQ92793 2442 aa0.93□□□□□ -2.26
HMGB1P49-201ENST00000418882 ABCA2Q9BZC7 2435 aa0.93□□□□□ -2.26
HMGB1P49-201ENST00000418882 MXRA5Q9NR99 2828 aa0.93□□□□□ -2.26
HMGB1P49-201ENST00000418882 ANKRD11Q6UB99 2663 aaPredicted RBP0.92□□□□□ -2.26
HMGB1P49-201ENST00000418882 ITPR1Q14643 2758 aa0.92□□□□□ -2.26
HMGB1P49-201ENST00000418882 C2CD3Q4AC94 2353 aa0.92□□□□□ -2.26
HMGB1P49-201ENST00000418882 VPS13CQ709C8 3753 aa0.92□□□□□ -2.26
HMGB1P49-201ENST00000418882 HIVEP3Q5T1R4 2406 aa0.92□□□□□ -2.26
HMGB1P49-201ENST00000418882 TRAV21A0A0B4J279 112 aa0.92□□□□□ -2.26
HMGB1P49-201ENST00000418882 I3L3M4 83 aa0.92□□□□□ -2.26
HMGB1P49-201ENST00000418882 SPAG11BQ08648 103 aa0.92□□□□□ -2.26
HMGB1P49-201ENST00000418882 FAM74A4Q5TZK3 123 aa0.92□□□□□ -2.26
HMGB1P49-201ENST00000418882 Q6JHZ5 121 aa0.92□□□□□ -2.26
HMGB1P49-201ENST00000418882 SPAG11AQ6PDA7 123 aa0.92□□□□□ -2.26
HMGB1P49-201ENST00000418882 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.92□□□□□ -2.26
HMGB1P49-201ENST00000418882 SERP2Q8N6R1 65 aa0.92□□□□□ -2.26
HMGB1P49-201ENST00000418882 DYNLRB1Q9NP97 96 aa0.92□□□□□ -2.26
HMGB1P49-201ENST00000418882 DNAH1Q9P2D7 4330 aa0.92□□□□□ -2.26
HMGB1P49-201ENST00000418882 CEP295Q9C0D2 2601 aa0.92□□□□□ -2.26
HMGB1P49-201ENST00000418882 PTPN13Q12923 2485 aa0.92□□□□□ -2.26
HMGB1P49-201ENST00000418882 SPG11Q96JI7 2443 aa0.91□□□□□ -2.26
HMGB1P49-201ENST00000418882 TLN1Q9Y490 2541 aaKnown RBP0.91□□□□□ -2.26
HMGB1P49-201ENST00000418882 BDP1A6H8Y1 2624 aa0.91□□□□□ -2.26
HMGB1P49-201ENST00000418882 ZNF292O60281 2723 aa0.91□□□□□ -2.26
HMGB1P49-201ENST00000418882 NBPF19A0A087WUL8 3843 aa0.91□□□□□ -2.26
HMGB1P49-201ENST00000418882 K7EIL1 84 aa0.91□□□□□ -2.26
HMGB1P49-201ENST00000418882 M0QY20 66 aa0.91□□□□□ -2.26
HMGB1P49-201ENST00000418882 NDUFA1O15239 70 aa0.91□□□□□ -2.26
HMGB1P49-201ENST00000418882 APELAP0DMC3 54 aa0.91□□□□□ -2.26
HMGB1P49-201ENST00000418882 RPL39P62891 51 aaKnown RBP0.91□□□□□ -2.26
HMGB1P49-201ENST00000418882 ATP5EP2Q5VTU8 51 aa0.91□□□□□ -2.26
HMGB1P49-201ENST00000418882 VMO1Q7Z5L0 202 aa0.91□□□□□ -2.26
HMGB1P49-201ENST00000418882 DEFB108BQ8NET1 73 aa0.91□□□□□ -2.26
HMGB1P49-201ENST00000418882 RPL39LQ96EH5 51 aaKnown RBP0.91□□□□□ -2.26
HMGB1P49-201ENST00000418882 UBE2D4Q9Y2X8 147 aa0.91□□□□□ -2.26
HMGB1P49-201ENST00000418882 GVINP1Q7Z2Y8 2422 aa0.91□□□□□ -2.26
HMGB1P49-201ENST00000418882 NBASA2RRP1 2371 aa0.91□□□□□ -2.26
HMGB1P49-201ENST00000418882 WNK1Q9H4A3 2382 aa0.91□□□□□ -2.26
HMGB1P49-201ENST00000418882 OTOGQ6ZRI0 2925 aa0.91□□□□□ -2.26
HMGB1P49-201ENST00000418882 CHD6Q8TD26 2715 aa0.9□□□□□ -2.26
HMGB1P49-201ENST00000418882 NF1P21359 2839 aa0.9□□□□□ -2.26
HMGB1P49-201ENST00000418882 ZANQ9Y493 2812 aa0.9□□□□□ -2.26
HMGB1P49-201ENST00000418882 FBN2P35556 2912 aa0.9□□□□□ -2.26
HMGB1P49-201ENST00000418882 GVQW2A0A096LPI5 108 aaPredicted RBP0.9□□□□□ -2.27
HMGB1P49-201ENST00000418882 A8MTW9 85 aa0.9□□□□□ -2.27
HMGB1P49-201ENST00000418882 H0YGX0 51 aa0.9□□□□□ -2.27
HMGB1P49-201ENST00000418882 H7BZZ5 65 aa0.9□□□□□ -2.27
HMGB1P49-201ENST00000418882 M0R1W7 72 aa0.9□□□□□ -2.27
HMGB1P49-201ENST00000418882 RPL37P61927 97 aaKnown RBP0.9□□□□□ -2.27
HMGB1P49-201ENST00000418882 MINOS1Q5TGZ0 78 aa0.9□□□□□ -2.27
HMGB1P49-201ENST00000418882 LINC00308Q8TCZ7 52 aa0.9□□□□□ -2.27
HMGB1P49-201ENST00000418882 LINC00846Q9NV44 126 aa0.9□□□□□ -2.27
HMGB1P49-201ENST00000418882 NCOR2Q9Y618 2525 aa0.9□□□□□ -2.27
HMGB1P49-201ENST00000418882 SVEP1Q4LDE5 3571 aa0.9□□□□□ -2.27
HMGB1P49-201ENST00000418882 TLN2Q9Y4G6 2542 aa0.89□□□□□ -2.27
HMGB1P49-201ENST00000418882 CSMD2Q7Z408 3487 aa0.89□□□□□ -2.27
HMGB1P49-201ENST00000418882 RIF1Q5UIP0 2472 aaKnown RBP0.89□□□□□ -2.27
HMGB1P49-201ENST00000418882 FAM223BA6NKX1 122 aa0.89□□□□□ -2.27
HMGB1P49-201ENST00000418882 H3BUA1 57 aa0.89□□□□□ -2.27
HMGB1P49-201ENST00000418882 NDUFA4O00483 81 aa0.89□□□□□ -2.27
HMGB1P49-201ENST00000418882 NDUFC1O43677 76 aa0.89□□□□□ -2.27
HMGB1P49-201ENST00000418882 MGPP08493 103 aa0.89□□□□□ -2.27
HMGB1P49-201ENST00000418882 ACYP2P14621 99 aa0.89□□□□□ -2.27
HMGB1P49-201ENST00000418882 FAM223AQ8IWN6 122 aa0.89□□□□□ -2.27
HMGB1P49-201ENST00000418882 FDCSPQ8NFU4 85 aa0.89□□□□□ -2.27
HMGB1P49-201ENST00000418882 USMG5Q96IX5 58 aa0.89□□□□□ -2.27
HMGB1P49-201ENST00000418882 CDKN2A-AS1Q9UH64 79 aa0.89□□□□□ -2.27
HMGB1P49-201ENST00000418882 MYO9AB2RTY4 2548 aa0.89□□□□□ -2.27
HMGB1P49-201ENST00000418882 TEX15Q9BXT5 2789 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms