RNA–Protein interactions for RNA: ENST00000415051.5

UBE2D4-202, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-202ENST00000415051 TTTY13Q9BZ97 58 aa8.46□□□□□ -1.06
UBE2D4-202ENST00000415051 FAM236DA0A1B0GTK5 79 aa8.45□□□□□ -1.06
UBE2D4-202ENST00000415051 F8WEM9 126 aa8.45□□□□□ -1.06
UBE2D4-202ENST00000415051 FAM236CP0DP71 79 aa8.45□□□□□ -1.06
UBE2D4-202ENST00000415051 A4D1N5 150 aa8.44□□□□□ -1.06
UBE2D4-202ENST00000415051 S100A1P23297 94 aa8.44□□□□□ -1.06
UBE2D4-202ENST00000415051 Q6JHZ5 121 aa8.44□□□□□ -1.06
UBE2D4-202ENST00000415051 ZNF815PA8K554 130 aa8.43□□□□□ -1.06
UBE2D4-202ENST00000415051 HRES1P13985 223 aa8.42□□□□□ -1.06
UBE2D4-202ENST00000415051 NHP2Q9NX24 153 aaKnown RBP8.42□□□□□ -1.06
UBE2D4-202ENST00000415051 A6NDN8 102 aa8.41□□□□□ -1.06
UBE2D4-202ENST00000415051 LST1O00453 97 aa8.41□□□□□ -1.06
UBE2D4-202ENST00000415051 TRGC2P03986 189 aa8.41□□□□□ -1.06
UBE2D4-202ENST00000415051 SMIM11BQ8TCY0 68 aa8.4□□□□□ -1.06
UBE2D4-202ENST00000415051 OCIAD2Q56VL3 154 aa8.38□□□□□ -1.07
UBE2D4-202ENST00000415051 TRAV13-2A0A0B4J235 113 aa8.36□□□□□ -1.07
UBE2D4-202ENST00000415051 Q6ZQY7 126 aa8.36□□□□□ -1.07
UBE2D4-202ENST00000415051 LINC00575Q6W349 94 aa8.35□□□□□ -1.07
UBE2D4-202ENST00000415051 SYS1-DBNDD2H3BUS1 97 aa8.34□□□□□ -1.07
UBE2D4-202ENST00000415051 RBM12B-AS1Q9P1G2 102 aa8.34□□□□□ -1.07
UBE2D4-202ENST00000415051 DSCR10P59022 87 aa8.33□□□□□ -1.08
UBE2D4-202ENST00000415051 NOTCH2NLQ7Z3S9 236 aa8.33□□□□□ -1.08
UBE2D4-202ENST00000415051 COLCA2A8K830 154 aa8.32□□□□□ -1.08
UBE2D4-202ENST00000415051 LINC01545Q5VT33 79 aa8.32□□□□□ -1.08
UBE2D4-202ENST00000415051 MUSTN1Q8IVN3 82 aa8.32□□□□□ -1.08
UBE2D4-202ENST00000415051 IFITM1P13164 125 aa8.31□□□□□ -1.08
UBE2D4-202ENST00000415051 H3BUT2 72 aa8.3□□□□□ -1.08
UBE2D4-202ENST00000415051 hADV29S1A0JD25 119 aa8.29□□□□□ -1.08
UBE2D4-202ENST00000415051 SCGB1D4Q6XE38 83 aa8.28□□□□□ -1.08
UBE2D4-202ENST00000415051 COPS9Q8WXC6 57 aa8.28□□□□□ -1.08
UBE2D4-202ENST00000415051 SS18L2Q9UHA2 77 aa8.26□□□□□ -1.09
UBE2D4-202ENST00000415051 Q6ZVH6 145 aa8.25□□□□□ -1.09
UBE2D4-202ENST00000415051 VAMP3Q15836 100 aa8.24□□□□□ -1.09
UBE2D4-202ENST00000415051 KRTAP20-1Q3LI63 56 aa8.24□□□□□ -1.09
UBE2D4-202ENST00000415051 ANKRD39Q53RE8 183 aa8.23□□□□□ -1.09
UBE2D4-202ENST00000415051 PET117Q6UWS5 81 aa8.23□□□□□ -1.09
UBE2D4-202ENST00000415051 Q8N9P0 234 aaPredicted RBP8.23□□□□□ -1.09
UBE2D4-202ENST00000415051 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.22□□□□□ -1.09
UBE2D4-202ENST00000415051 PPDPFLQ8WWR9 84 aa8.21□□□□□ -1.1
UBE2D4-202ENST00000415051 A0A087WSZ3 146 aa8.2□□□□□ -1.1
UBE2D4-202ENST00000415051 SNHG12Q9BXW3 62 aa8.2□□□□□ -1.1
UBE2D4-202ENST00000415051 SCGB1D1O95968 90 aa8.18□□□□□ -1.1
UBE2D4-202ENST00000415051 LINC00313P59037 77 aa8.18□□□□□ -1.1
UBE2D4-202ENST00000415051 TEN1Q86WV5 123 aa8.18□□□□□ -1.1
UBE2D4-202ENST00000415051 KRTAP3-3Q9BYR6 98 aa8.18□□□□□ -1.1
UBE2D4-202ENST00000415051 KRTAP3-2Q9BYR7 98 aa8.18□□□□□ -1.1
UBE2D4-202ENST00000415051 A8MWP4 228 aa8.17□□□□□ -1.1
UBE2D4-202ENST00000415051 C3orf79P0CE67 100 aa8.16□□□□□ -1.1
UBE2D4-202ENST00000415051 HIST1H2BKO60814 126 aa8.15□□□□□ -1.1
UBE2D4-202ENST00000415051 HIST1H2BJP06899 126 aa8.15□□□□□ -1.1
UBE2D4-202ENST00000415051 HIST1H2BOP23527 126 aa8.15□□□□□ -1.1
UBE2D4-202ENST00000415051 HIST1H2BBP33778 126 aa8.15□□□□□ -1.1
UBE2D4-202ENST00000415051 HIST1H2BDP58876 126 aa8.15□□□□□ -1.1
UBE2D4-202ENST00000415051 HIST1H2BCP62807 126 aa8.15□□□□□ -1.1
UBE2D4-202ENST00000415051 HIST2H2BEQ16778 126 aa8.15□□□□□ -1.1
UBE2D4-202ENST00000415051 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.15□□□□□ -1.1
UBE2D4-202ENST00000415051 HIST1H2BHQ93079 126 aa8.15□□□□□ -1.1
UBE2D4-202ENST00000415051 SIGMAR1Q99720 223 aa8.15□□□□□ -1.1
UBE2D4-202ENST00000415051 HIST1H2BNQ99877 126 aa8.15□□□□□ -1.1
UBE2D4-202ENST00000415051 HIST1H2BMQ99879 126 aa8.15□□□□□ -1.1
UBE2D4-202ENST00000415051 MDN1Q9NU22 5596 aa8.13□□□□□ -1.11
UBE2D4-202ENST00000415051 MTURNQ8N3F0 131 aa8.13□□□□□ -1.11
UBE2D4-202ENST00000415051 COA6Q5JTJ3 125 aaKnown RBP8.11□□□□□ -1.11
UBE2D4-202ENST00000415051 ATOH7Q8N100 152 aa8.08□□□□□ -1.12
UBE2D4-202ENST00000415051 KMT2DO14686 5537 aa8.07□□□□□ -1.12
UBE2D4-202ENST00000415051 IGKV4-1P06312 121 aa8.07□□□□□ -1.12
UBE2D4-202ENST00000415051 NDUFV3P56181 108 aaKnown RBP8.07□□□□□ -1.12
UBE2D4-202ENST00000415051 A0A1W2PNM2 257 aa8.06□□□□□ -1.12
UBE2D4-202ENST00000415051 KRTDAPP60985 99 aa8.06□□□□□ -1.12
UBE2D4-202ENST00000415051 BVES-AS1Q5T3Y7 98 aa8.05□□□□□ -1.12
UBE2D4-202ENST00000415051 SPINK7P58062 85 aa8.04□□□□□ -1.12
UBE2D4-202ENST00000415051 S100A6P06703 90 aa8.01□□□□□ -1.13
UBE2D4-202ENST00000415051 DEFB116Q30KQ4 102 aa8.01□□□□□ -1.13
UBE2D4-202ENST00000415051 H3BMG7 143 aa8□□□□□ -1.13
UBE2D4-202ENST00000415051 C12orf57Q99622 126 aa8□□□□□ -1.13
UBE2D4-202ENST00000415051 IGHV6-1A0A0B4J1U7 121 aa7.99□□□□□ -1.13
UBE2D4-202ENST00000415051 KRTAP5-9P26371 169 aa7.99□□□□□ -1.13
UBE2D4-202ENST00000415051 ZCCHC13Q8WW36 166 aaKnown RBP7.99□□□□□ -1.13
UBE2D4-202ENST00000415051 FAM218AQ96MZ4 157 aa7.99□□□□□ -1.13
UBE2D4-202ENST00000415051 LINC00472Q9H8W2 130 aa7.99□□□□□ -1.13
UBE2D4-202ENST00000415051 HIST3H2BBQ8N257 126 aa7.98□□□□□ -1.13
UBE2D4-202ENST00000415051 SNRPEP62304 92 aaKnown RBP7.96□□□□□ -1.14
UBE2D4-202ENST00000415051 WFDC13Q8IUB5 93 aa7.96□□□□□ -1.14
UBE2D4-202ENST00000415051 A6NN06 94 aa7.95□□□□□ -1.14
UBE2D4-202ENST00000415051 S100A2P29034 98 aa7.95□□□□□ -1.14
UBE2D4-202ENST00000415051 HIST1H2BLQ99880 126 aa7.94□□□□□ -1.14
UBE2D4-202ENST00000415051 TRBV7-4A0A0J9YYF1 115 aa7.92□□□□□ -1.14
UBE2D4-202ENST00000415051 MT1BP07438 61 aa7.9□□□□□ -1.14
UBE2D4-202ENST00000415051 TMA7Q9Y2S6 64 aaKnown RBP7.9□□□□□ -1.14
UBE2D4-202ENST00000415051 A0A1B0GVX0 72 aa7.88□□□□□ -1.15
UBE2D4-202ENST00000415051 C8orf87E5RJ46 101 aa7.88□□□□□ -1.15
UBE2D4-202ENST00000415051 FABP2P12104 132 aa7.88□□□□□ -1.15
UBE2D4-202ENST00000415051 RAB37Q96AX2 223 aa7.88□□□□□ -1.15
UBE2D4-202ENST00000415051 H0YGX0 51 aa7.86□□□□□ -1.15
UBE2D4-202ENST00000415051 KRTAP2-3P0C7H8 128 aa7.86□□□□□ -1.15
UBE2D4-202ENST00000415051 KRTAP2-4Q9BYR9 128 aa7.86□□□□□ -1.15
UBE2D4-202ENST00000415051 SNCGO76070 127 aa7.85□□□□□ -1.15
UBE2D4-202ENST00000415051 ANKRD29Q8N6D5 301 aa7.85□□□□□ -1.15
UBE2D4-202ENST00000415051 A0A1B0GV72 72 aa7.82□□□□□ -1.16
UBE2D4-202ENST00000415051 GHRHP01286 108 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms