RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 MRPL35Q9NZE8 188 aaKnown RBP1.43□□□□□ -2.18
MCF2-204ENST00000414978 IGIPA6NJ69 53 aa1.43□□□□□ -2.18
MCF2-204ENST00000414978 COX8AP10176 69 aa1.43□□□□□ -2.18
MCF2-204ENST00000414978 TRBV6-4A0A1B0GX49 114 aa1.42□□□□□ -2.18
MCF2-204ENST00000414978 A8MU10 97 aa1.42□□□□□ -2.18
MCF2-204ENST00000414978 MIFP14174 115 aa1.42□□□□□ -2.18
MCF2-204ENST00000414978 KRTAP10-4P60372 401 aaPredicted RBP1.42□□□□□ -2.18
MCF2-204ENST00000414978 SPANXA1Q9NS26 97 aa1.42□□□□□ -2.18
MCF2-204ENST00000414978 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.42□□□□□ -2.18
MCF2-204ENST00000414978 IGKV2-29A2NJV5 120 aaPredicted RBP1.42□□□□□ -2.18
MCF2-204ENST00000414978 DEFB4AO15263 64 aa1.42□□□□□ -2.18
MCF2-204ENST00000414978 TMEM170BQ5T4T1 132 aa1.42□□□□□ -2.18
MCF2-204ENST00000414978 TRBV25-1A0A075B6N4 114 aa1.42□□□□□ -2.18
MCF2-204ENST00000414978 CRPP02741 224 aa1.42□□□□□ -2.18
MCF2-204ENST00000414978 SPART-AS1P0CW21 52 aa1.42□□□□□ -2.18
MCF2-204ENST00000414978 KRTAP10-12P60413 245 aa1.42□□□□□ -2.18
MCF2-204ENST00000414978 UBE2D3P61077 147 aa1.42□□□□□ -2.18
MCF2-204ENST00000414978 UBE2D2P62837 147 aa1.42□□□□□ -2.18
MCF2-204ENST00000414978 DIRC1Q969H9 104 aa1.42□□□□□ -2.18
MCF2-204ENST00000414978 RNF213Q63HN8 5207 aa1.41□□□□□ -2.18
MCF2-204ENST00000414978 COL5A1-AS1Q5SY13 56 aa1.41□□□□□ -2.18
MCF2-204ENST00000414978 LELP1Q5T871 98 aa1.41□□□□□ -2.18
MCF2-204ENST00000414978 LINC00304Q8N9R0 145 aa1.41□□□□□ -2.18
MCF2-204ENST00000414978 TIMM21Q9BVV7 248 aa1.41□□□□□ -2.18
MCF2-204ENST00000414978 PRO0255Q9UI72 69 aa1.41□□□□□ -2.18
MCF2-204ENST00000414978 UBE2D4Q9Y2X8 147 aa1.41□□□□□ -2.18
MCF2-204ENST00000414978 IGKV2D-26A0A0A0MRZ7 120 aa1.41□□□□□ -2.18
MCF2-204ENST00000414978 HTN3P15516 51 aa1.41□□□□□ -2.18
MCF2-204ENST00000414978 MRPS36P82909 103 aaKnown RBP1.41□□□□□ -2.18
MCF2-204ENST00000414978 Q6ZUT4 128 aa1.41□□□□□ -2.18
MCF2-204ENST00000414978 ATP6V0E2Q8NHE4 81 aa1.41□□□□□ -2.18
MCF2-204ENST00000414978 AMELXQ99217 191 aa1.41□□□□□ -2.18
MCF2-204ENST00000414978 CYSTM1Q9H1C7 97 aa1.41□□□□□ -2.18
MCF2-204ENST00000414978 AHNAKQ09666 5890 aaKnown RBP1.41□□□□□ -2.18
MCF2-204ENST00000414978 DMBT1Q9UGM3 2413 aaPredicted RBP1.41□□□□□ -2.18
MCF2-204ENST00000414978 TRBV6-8A0A0A6YYG3 113 aa1.41□□□□□ -2.18
MCF2-204ENST00000414978 A0A0G2JQZ4 141 aa1.41□□□□□ -2.18
MCF2-204ENST00000414978 A0A0J9YY99 117 aa1.41□□□□□ -2.18
MCF2-204ENST00000414978 MYMXA0A1B0GTQ4 84 aa1.41□□□□□ -2.18
MCF2-204ENST00000414978 ZNF815PA8K554 130 aa1.41□□□□□ -2.18
MCF2-204ENST00000414978 H3BMG7 143 aa1.41□□□□□ -2.18
MCF2-204ENST00000414978 KRTAP10-6P60371 365 aaPredicted RBP1.41□□□□□ -2.18
MCF2-204ENST00000414978 SEC11AP67812 179 aa1.41□□□□□ -2.18
MCF2-204ENST00000414978 HSD52Q0P140 79 aa1.41□□□□□ -2.18
MCF2-204ENST00000414978 IGHV3-64A0A075B6Q5 118 aa1.4□□□□□ -2.18
MCF2-204ENST00000414978 A0A1B0GU33 70 aa1.4□□□□□ -2.18
MCF2-204ENST00000414978 TMEM262E9PQX1 116 aa1.4□□□□□ -2.18
MCF2-204ENST00000414978 H3BRM9 83 aa1.4□□□□□ -2.18
MCF2-204ENST00000414978 BVES-AS1Q5T3Y7 98 aa1.4□□□□□ -2.18
MCF2-204ENST00000414978 Q6ZQT0 140 aa1.4□□□□□ -2.18
MCF2-204ENST00000414978 C9orf163Q8N9P6 203 aa1.4□□□□□ -2.18
MCF2-204ENST00000414978 HIGD1BQ9P298 99 aa1.4□□□□□ -2.18
MCF2-204ENST00000414978 A0A096LPF7 62 aa1.4□□□□□ -2.19
MCF2-204ENST00000414978 TRAV13-1A0A0B4J241 112 aa1.4□□□□□ -2.19
MCF2-204ENST00000414978 PSCAO43653 123 aa1.4□□□□□ -2.19
MCF2-204ENST00000414978 UBE2D1P51668 147 aa1.4□□□□□ -2.19
MCF2-204ENST00000414978 ESRGQ1W209 222 aa1.4□□□□□ -2.19
MCF2-204ENST00000414978 C15orf53Q8NAA6 179 aa1.4□□□□□ -2.19
MCF2-204ENST00000414978 IGKV3OR2-268A0A0C4DH90 116 aa1.4□□□□□ -2.19
MCF2-204ENST00000414978 MT1HL1P0DM35 61 aa1.4□□□□□ -2.19
MCF2-204ENST00000414978 Q6ZSA8 131 aa1.4□□□□□ -2.19
MCF2-204ENST00000414978 TEN1Q86WV5 123 aa1.4□□□□□ -2.19
MCF2-204ENST00000414978 CDC42SE2Q9NRR3 84 aa1.4□□□□□ -2.19
MCF2-204ENST00000414978 IGHV1-58A0A0C4DH39 117 aa1.39□□□□□ -2.19
MCF2-204ENST00000414978 TRBV10-2A0A0K0K1G8 114 aa1.39□□□□□ -2.19
MCF2-204ENST00000414978 NBDYA0A0U1RRE5 68 aa1.39□□□□□ -2.19
MCF2-204ENST00000414978 SPINK8P0C7L1 97 aa1.39□□□□□ -2.19
MCF2-204ENST00000414978 Q6ZRN7 208 aaPredicted RBP1.39□□□□□ -2.19
MCF2-204ENST00000414978 CDKN2A-AS1Q9UH64 79 aa1.39□□□□□ -2.19
MCF2-204ENST00000414978 NDUFA12Q9UI09 145 aa1.39□□□□□ -2.19
MCF2-204ENST00000414978 TCL1BO95988 128 aa1.39□□□□□ -2.19
MCF2-204ENST00000414978 SMIM13P0DJ93 91 aa1.39□□□□□ -2.19
MCF2-204ENST00000414978 ROMO1P60602 79 aa1.39□□□□□ -2.19
MCF2-204ENST00000414978 COX6A2Q02221 97 aa1.39□□□□□ -2.19
MCF2-204ENST00000414978 SS18Q15532 418 aa1.39□□□□□ -2.19
MCF2-204ENST00000414978 CLEC2BQ92478 149 aa1.39□□□□□ -2.19
MCF2-204ENST00000414978 DEFB131BA0A096LNP1 70 aa1.38□□□□□ -2.19
MCF2-204ENST00000414978 H3BNG1 76 aa1.38□□□□□ -2.19
MCF2-204ENST00000414978 DNAL4O96015 105 aa1.38□□□□□ -2.19
MCF2-204ENST00000414978 ANGP03950 147 aaKnown RBP1.38□□□□□ -2.19
MCF2-204ENST00000414978 FXYD2P54710 66 aa1.38□□□□□ -2.19
MCF2-204ENST00000414978 CIRBPQ14011 172 aaKnown RBP1.38□□□□□ -2.19
MCF2-204ENST00000414978 CLPSL2Q6UWE3 100 aa1.38□□□□□ -2.19
MCF2-204ENST00000414978 RAB37Q96AX2 223 aa1.38□□□□□ -2.19
MCF2-204ENST00000414978 NHP2Q9NX24 153 aaKnown RBP1.38□□□□□ -2.19
MCF2-204ENST00000414978 IGLV10-54A0A075B6I4 117 aa1.38□□□□□ -2.19
MCF2-204ENST00000414978 LINC00959A0A1B0GUT2 108 aa1.38□□□□□ -2.19
MCF2-204ENST00000414978 J3QR89 54 aa1.38□□□□□ -2.19
MCF2-204ENST00000414978 XAGE1AQ9HD64 81 aa1.38□□□□□ -2.19
MCF2-204ENST00000414978 TOMM7Q9P0U1 55 aa1.38□□□□□ -2.19
MCF2-204ENST00000414978 H3BUT2 72 aa1.38□□□□□ -2.19
MCF2-204ENST00000414978 NDUFA1O15239 70 aa1.38□□□□□ -2.19
MCF2-204ENST00000414978 MEIG1Q5JSS6 88 aa1.38□□□□□ -2.19
MCF2-204ENST00000414978 LYPD5Q6UWN5 251 aa1.38□□□□□ -2.19
MCF2-204ENST00000414978 C7orf65Q6ZTY9 151 aa1.38□□□□□ -2.19
MCF2-204ENST00000414978 C5orf38Q86SI9 138 aa1.38□□□□□ -2.19
MCF2-204ENST00000414978 LINC00269Q8N2A0 174 aa1.38□□□□□ -2.19
MCF2-204ENST00000414978 C10orf126Q8N4M7 172 aa1.38□□□□□ -2.19
MCF2-204ENST00000414978 LINC00846Q9NV44 126 aa1.38□□□□□ -2.19
MCF2-204ENST00000414978 IGHV3-30P01768 117 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms