RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 COX6B2Q6YFQ2 88 aa8.61□□□□□ -1.03
CPNE1-208ENST00000414711 KRTAP4-16G5E9R7 235 aaPredicted RBP8.6□□□□□ -1.03
CPNE1-208ENST00000414711 H7C2G1 150 aa8.6□□□□□ -1.03
CPNE1-208ENST00000414711 K7ERJ3 54 aa8.6□□□□□ -1.03
CPNE1-208ENST00000414711 Q1RN00 199 aa8.6□□□□□ -1.03
CPNE1-208ENST00000414711 SMIM11BQ8TCY0 68 aa8.6□□□□□ -1.03
CPNE1-208ENST00000414711 FAM19A1Q7Z5A9 133 aa8.59□□□□□ -1.03
CPNE1-208ENST00000414711 TRBV7-6A0A0J9YX20 115 aa8.58□□□□□ -1.04
CPNE1-208ENST00000414711 VAMP3Q15836 100 aa8.58□□□□□ -1.04
CPNE1-208ENST00000414711 C6orf99Q4VX62 202 aa8.58□□□□□ -1.04
CPNE1-208ENST00000414711 KRTAP19-1Q8IUB9 90 aa8.57□□□□□ -1.04
CPNE1-208ENST00000414711 COX7BP24311 80 aa8.56□□□□□ -1.04
CPNE1-208ENST00000414711 Q8N377 158 aa8.56□□□□□ -1.04
CPNE1-208ENST00000414711 B5MCH6 92 aa8.55□□□□□ -1.04
CPNE1-208ENST00000414711 SNHG12Q9BXW3 62 aa8.55□□□□□ -1.04
CPNE1-208ENST00000414711 PSMB2P49721 201 aa8.54□□□□□ -1.04
CPNE1-208ENST00000414711 Q6ZRX8 168 aa8.54□□□□□ -1.04
CPNE1-208ENST00000414711 SPRR4Q96PI1 79 aa8.54□□□□□ -1.04
CPNE1-208ENST00000414711 ELOF1P60002 83 aaKnown RBP8.53□□□□□ -1.04
CPNE1-208ENST00000414711 HIGD2AQ9BW72 106 aa8.53□□□□□ -1.04
CPNE1-208ENST00000414711 H0YGX0 51 aa8.52□□□□□ -1.05
CPNE1-208ENST00000414711 SLC25A20O43772 301 aa8.52□□□□□ -1.05
CPNE1-208ENST00000414711 COX6CP09669 75 aa8.52□□□□□ -1.05
CPNE1-208ENST00000414711 RPS29P62273 56 aaKnown RBP8.52□□□□□ -1.05
CPNE1-208ENST00000414711 COL5A1-AS1Q5SY13 56 aa8.51□□□□□ -1.05
CPNE1-208ENST00000414711 DHRS4-AS1Q9P1J3 65 aa8.51□□□□□ -1.05
CPNE1-208ENST00000414711 TRIAP1O43715 76 aa8.5□□□□□ -1.05
CPNE1-208ENST00000414711 SNCGO76070 127 aa8.49□□□□□ -1.05
CPNE1-208ENST00000414711 SMCR5Q8TEV8 140 aa8.48□□□□□ -1.05
CPNE1-208ENST00000414711 Q9BRP9 147 aa8.48□□□□□ -1.05
CPNE1-208ENST00000414711 ZNF706Q9Y5V0 76 aaPredicted RBP8.48□□□□□ -1.05
CPNE1-208ENST00000414711 TAX1BP3O14907 124 aa8.47□□□□□ -1.05
CPNE1-208ENST00000414711 SCGB1C2P0DMR2 95 aa8.47□□□□□ -1.05
CPNE1-208ENST00000414711 LINC00575Q6W349 94 aa8.47□□□□□ -1.05
CPNE1-208ENST00000414711 C9orf118A6NHY6 69 aa8.46□□□□□ -1.06
CPNE1-208ENST00000414711 LYRM7Q5U5X0 104 aa8.46□□□□□ -1.06
CPNE1-208ENST00000414711 hADV29S1A0JD25 119 aa8.45□□□□□ -1.06
CPNE1-208ENST00000414711 A0A1B0GX51 115 aa8.44□□□□□ -1.06
CPNE1-208ENST00000414711 H3BUT2 72 aa8.44□□□□□ -1.06
CPNE1-208ENST00000414711 NAA38Q9BRA0 125 aaKnown RBP8.44□□□□□ -1.06
CPNE1-208ENST00000414711 ERC2-IT1O76042 136 aa8.42□□□□□ -1.06
CPNE1-208ENST00000414711 CLEC2BQ92478 149 aa8.42□□□□□ -1.06
CPNE1-208ENST00000414711 KRTAP9-8Q9BYQ0 159 aa8.42□□□□□ -1.06
CPNE1-208ENST00000414711 A0A1W2PPM0 123 aa8.4□□□□□ -1.06
CPNE1-208ENST00000414711 C9orf92A6NGG3 77 aa8.4□□□□□ -1.06
CPNE1-208ENST00000414711 FABP2P12104 132 aa8.4□□□□□ -1.06
CPNE1-208ENST00000414711 MOBPQ13875 183 aa8.4□□□□□ -1.06
CPNE1-208ENST00000414711 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.4□□□□□ -1.06
CPNE1-208ENST00000414711 FAM218AQ96MZ4 157 aa8.4□□□□□ -1.06
CPNE1-208ENST00000414711 TRBV20-1A0A075B6N2 111 aa8.39□□□□□ -1.07
CPNE1-208ENST00000414711 LST1O00453 97 aa8.39□□□□□ -1.07
CPNE1-208ENST00000414711 DNAL4O96015 105 aa8.39□□□□□ -1.07
CPNE1-208ENST00000414711 ATXN8Q156A1 80 aa8.39□□□□□ -1.07
CPNE1-208ENST00000414711 GHRHP01286 108 aa8.38□□□□□ -1.07
CPNE1-208ENST00000414711 TRACP01848 142 aa8.38□□□□□ -1.07
CPNE1-208ENST00000414711 OCIAD2Q56VL3 154 aa8.38□□□□□ -1.07
CPNE1-208ENST00000414711 Q6ZQY7 126 aa8.38□□□□□ -1.07
CPNE1-208ENST00000414711 ST20-AS1Q8NBB2 130 aa8.38□□□□□ -1.07
CPNE1-208ENST00000414711 IGLV9-49A0A0B4J1Y8 123 aa8.36□□□□□ -1.07
CPNE1-208ENST00000414711 TEX49A0A1B0GTD5 131 aa8.36□□□□□ -1.07
CPNE1-208ENST00000414711 TCL1BO95988 128 aa8.36□□□□□ -1.07
CPNE1-208ENST00000414711 KRTAP6-3Q3LI67 103 aa8.36□□□□□ -1.07
CPNE1-208ENST00000414711 LINC00483Q53H64 154 aa8.36□□□□□ -1.07
CPNE1-208ENST00000414711 GAGE2AQ6NT46 116 aa8.36□□□□□ -1.07
CPNE1-208ENST00000414711 DEFB105AQ8NG35 78 aa8.36□□□□□ -1.07
CPNE1-208ENST00000414711 IGLV5-48A0A075B6I7 105 aa8.35□□□□□ -1.07
CPNE1-208ENST00000414711 LCE2BO14633 110 aa8.35□□□□□ -1.07
CPNE1-208ENST00000414711 PPDPFLQ8WWR9 84 aa8.35□□□□□ -1.07
CPNE1-208ENST00000414711 H3BQ85 93 aa8.34□□□□□ -1.07
CPNE1-208ENST00000414711 SPRR1BP22528 89 aa8.34□□□□□ -1.07
CPNE1-208ENST00000414711 SSBP3-AS1Q7Z2R9 100 aa8.34□□□□□ -1.07
CPNE1-208ENST00000414711 ORMDL1Q9P0S3 153 aa8.33□□□□□ -1.08
CPNE1-208ENST00000414711 SPCS1Q9Y6A9 102 aa8.33□□□□□ -1.08
CPNE1-208ENST00000414711 NEBP20929 6669 aa8.32□□□□□ -1.08
CPNE1-208ENST00000414711 LAMTOR3Q9UHA4 124 aa8.31□□□□□ -1.08
CPNE1-208ENST00000414711 Q6Q795 121 aa8.3□□□□□ -1.08
CPNE1-208ENST00000414711 TMEM256-PLSCR3K7ERE1 68 aa8.29□□□□□ -1.08
CPNE1-208ENST00000414711 K7EP34 96 aa8.28□□□□□ -1.08
CPNE1-208ENST00000414711 GTF2H5Q6ZYL4 71 aa8.28□□□□□ -1.08
CPNE1-208ENST00000414711 LINC00846Q9NV44 126 aa8.28□□□□□ -1.08
CPNE1-208ENST00000414711 F8WEM9 126 aa8.27□□□□□ -1.09
CPNE1-208ENST00000414711 H3BMG7 143 aa8.27□□□□□ -1.09
CPNE1-208ENST00000414711 C9JAW5 83 aa8.26□□□□□ -1.09
CPNE1-208ENST00000414711 BAALC-AS2P0C853 105 aa8.26□□□□□ -1.09
CPNE1-208ENST00000414711 RPL37P61927 97 aaKnown RBP8.26□□□□□ -1.09
CPNE1-208ENST00000414711 SMIM29Q86T20 159 aa8.26□□□□□ -1.09
CPNE1-208ENST00000414711 NDUFV3P56181 108 aaKnown RBP8.24□□□□□ -1.09
CPNE1-208ENST00000414711 UBE2V1Q13404 147 aa8.24□□□□□ -1.09
CPNE1-208ENST00000414711 C9orf153Q5TBE3 101 aa8.24□□□□□ -1.09
CPNE1-208ENST00000414711 MT2AP02795 61 aa8.23□□□□□ -1.09
CPNE1-208ENST00000414711 H3BT86 120 aa8.22□□□□□ -1.09
CPNE1-208ENST00000414711 ANKRD29Q8N6D5 301 aa8.21□□□□□ -1.1
CPNE1-208ENST00000414711 LIMD2Q9BT23 127 aa8.21□□□□□ -1.1
CPNE1-208ENST00000414711 KRTAP19-6Q3LI70 58 aa8.2□□□□□ -1.1
CPNE1-208ENST00000414711 Q6JHZ5 121 aa8.19□□□□□ -1.1
CPNE1-208ENST00000414711 A0A1B0GV90 55 aa8.18□□□□□ -1.1
CPNE1-208ENST00000414711 KRTAP20-1Q3LI63 56 aa8.18□□□□□ -1.1
CPNE1-208ENST00000414711 MTURNQ8N3F0 131 aa8.18□□□□□ -1.1
CPNE1-208ENST00000414711 KRTAP9-3Q9BYQ3 159 aa8.18□□□□□ -1.1
CPNE1-208ENST00000414711 MT1FP04733 61 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms