RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 KRTAP7-1Q8IUC3 87 aa3.04□□□□□ -1.92
HERC4-205ENST00000412272 DEFB124Q8NES8 71 aa3.04□□□□□ -1.92
HERC4-205ENST00000412272 LRBAP50851 2863 aa3.04□□□□□ -1.92
HERC4-205ENST00000412272 EP300Q09472 2414 aaPredicted RBP3.03□□□□□ -1.92
HERC4-205ENST00000412272 MAP1BP46821 2468 aaKnown RBP3.03□□□□□ -1.92
HERC4-205ENST00000412272 C2CD3Q4AC94 2353 aa3.03□□□□□ -1.92
HERC4-205ENST00000412272 HRNRQ86YZ3 2850 aaPredicted RBP3.03□□□□□ -1.92
HERC4-205ENST00000412272 NCOR1O75376 2440 aa3.03□□□□□ -1.92
HERC4-205ENST00000412272 TPRP12270 2363 aaKnown RBP3.03□□□□□ -1.92
HERC4-205ENST00000412272 H0YAA0 97 aa3.03□□□□□ -1.92
HERC4-205ENST00000412272 DEFB130BP0DP73 79 aa3.03□□□□□ -1.92
HERC4-205ENST00000412272 DEFB130AP0DP74 79 aa3.03□□□□□ -1.92
HERC4-205ENST00000412272 SSBP3-AS1Q7Z2R9 100 aa3.03□□□□□ -1.92
HERC4-205ENST00000412272 CHD8Q9HCK8 2581 aa3.02□□□□□ -1.93
HERC4-205ENST00000412272 A0A096LPF7 62 aa3.02□□□□□ -1.93
HERC4-205ENST00000412272 ADGRG4Q8IZF6 3080 aa3.02□□□□□ -1.93
HERC4-205ENST00000412272 UNC79Q9P2D8 2635 aa3.02□□□□□ -1.93
HERC4-205ENST00000412272 TPRXLQ17RH7 258 aa3.01□□□□□ -1.93
HERC4-205ENST00000412272 DNAH1Q9P2D7 4330 aa3.01□□□□□ -1.93
HERC4-205ENST00000412272 PSORS1C2Q9UIG4 136 aa3.01□□□□□ -1.93
HERC4-205ENST00000412272 FLG2Q5D862 2391 aaPredicted RBP3.01□□□□□ -1.93
HERC4-205ENST00000412272 SPTA1P02549 2419 aa3.01□□□□□ -1.93
HERC4-205ENST00000412272 MRPL34Q9BQ48 92 aaKnown RBP3□□□□□ -1.93
HERC4-205ENST00000412272 ANK2Q01484 3957 aa2.99□□□□□ -1.93
HERC4-205ENST00000412272 ZFHX2Q9C0A1 2572 aaPredicted RBP2.99□□□□□ -1.93
HERC4-205ENST00000412272 NF1P21359 2839 aa2.99□□□□□ -1.93
HERC4-205ENST00000412272 K7EIL1 84 aa2.99□□□□□ -1.93
HERC4-205ENST00000412272 UBR5O95071 2799 aaPredicted RBP2.99□□□□□ -1.93
HERC4-205ENST00000412272 SPTBN4Q9H254 2564 aa2.99□□□□□ -1.93
HERC4-205ENST00000412272 DNHD1Q96M86 4753 aa2.98□□□□□ -1.93
HERC4-205ENST00000412272 PIEZO1Q92508 2521 aa2.98□□□□□ -1.93
HERC4-205ENST00000412272 Q6ZSA8 131 aa2.98□□□□□ -1.93
HERC4-205ENST00000412272 LINC01556Q5JQF7 62 aa2.98□□□□□ -1.93
HERC4-205ENST00000412272 ANK3Q12955 4377 aaKnown RBP2.97□□□□□ -1.93
HERC4-205ENST00000412272 LY6G6CO95867 125 aa2.96□□□□□ -1.94
HERC4-205ENST00000412272 FBN1P35555 2871 aaKnown RBP2.96□□□□□ -1.94
HERC4-205ENST00000412272 LYSTQ99698 3801 aa2.96□□□□□ -1.94
HERC4-205ENST00000412272 ANAPC11Q9NYG5 84 aa2.96□□□□□ -1.94
HERC4-205ENST00000412272 SPART-AS1P0CW21 52 aa2.95□□□□□ -1.94
HERC4-205ENST00000412272 TTC28Q96AY4 2481 aa2.94□□□□□ -1.94
HERC4-205ENST00000412272 NOTCH3Q9UM47 2321 aa2.93□□□□□ -1.94
HERC4-205ENST00000412272 ANKHD1Q8IWZ3 2542 aaKnown RBP2.93□□□□□ -1.94
HERC4-205ENST00000412272 KRTAP13-1Q8IUC0 172 aa2.93□□□□□ -1.94
HERC4-205ENST00000412272 IGKV2-30P06310 120 aa2.92□□□□□ -1.94
HERC4-205ENST00000412272 CAMK2N1Q7Z7J9 78 aa2.91□□□□□ -1.94
HERC4-205ENST00000412272 CEP290O15078 2479 aa2.91□□□□□ -1.94
HERC4-205ENST00000412272 RIF1Q5UIP0 2472 aaKnown RBP2.91□□□□□ -1.94
HERC4-205ENST00000412272 ATRXP46100 2492 aa2.91□□□□□ -1.94
HERC4-205ENST00000412272 C10orf95Q9H7T3 257 aa2.9□□□□□ -1.94
HERC4-205ENST00000412272 APCP25054 2843 aa2.9□□□□□ -1.95
HERC4-205ENST00000412272 CACNA1HO95180 2353 aa2.9□□□□□ -1.95
HERC4-205ENST00000412272 PRLHP81277 87 aa2.89□□□□□ -1.95
HERC4-205ENST00000412272 FAM229AH3BQW9 127 aa2.89□□□□□ -1.95
HERC4-205ENST00000412272 KRTAP3-3Q9BYR6 98 aa2.89□□□□□ -1.95
HERC4-205ENST00000412272 KRTAP3-2Q9BYR7 98 aa2.89□□□□□ -1.95
HERC4-205ENST00000412272 SPG11Q96JI7 2443 aa2.89□□□□□ -1.95
HERC4-205ENST00000412272 IGKV2D-30A0A075B6S6 120 aa2.88□□□□□ -1.95
HERC4-205ENST00000412272 TRRAPQ9Y4A5 3859 aa2.87□□□□□ -1.95
HERC4-205ENST00000412272 BDP1A6H8Y1 2624 aa2.87□□□□□ -1.95
HERC4-205ENST00000412272 NCOR2Q9Y618 2525 aa2.87□□□□□ -1.95
HERC4-205ENST00000412272 DEFB135Q30KP9 77 aa2.87□□□□□ -1.95
HERC4-205ENST00000412272 TEX15Q9BXT5 2789 aa2.86□□□□□ -1.95
HERC4-205ENST00000412272 VWFP04275 2813 aa2.86□□□□□ -1.95
HERC4-205ENST00000412272 A0A1B0GU33 70 aa2.86□□□□□ -1.95
HERC4-205ENST00000412272 DNAH3Q8TD57 4116 aa2.86□□□□□ -1.95
HERC4-205ENST00000412272 TENM4Q6N022 2769 aa2.85□□□□□ -1.95
HERC4-205ENST00000412272 H1FX-AS1Q4G0G2 97 aa2.85□□□□□ -1.95
HERC4-205ENST00000412272 CREBBPQ92793 2442 aa2.84□□□□□ -1.95
HERC4-205ENST00000412272 A0A096LNI7 61 aa2.84□□□□□ -1.95
HERC4-205ENST00000412272 DEFB4AO15263 64 aa2.84□□□□□ -1.95
HERC4-205ENST00000412272 TYMSOSQ8TAI1 123 aa2.84□□□□□ -1.95
HERC4-205ENST00000412272 MUC6Q6W4X9 2439 aa2.84□□□□□ -1.96
HERC4-205ENST00000412272 BAHCC1Q9P281 2608 aa2.83□□□□□ -1.96
HERC4-205ENST00000412272 LCE2DQ5TA82 110 aaPredicted RBP2.83□□□□□ -1.96
HERC4-205ENST00000412272 ANKRD11Q6UB99 2663 aaPredicted RBP2.83□□□□□ -1.96
HERC4-205ENST00000412272 FASNP49327 2511 aaKnown RBP2.83□□□□□ -1.96
HERC4-205ENST00000412272 KRTAP24-1Q3LI83 254 aa2.83□□□□□ -1.96
HERC4-205ENST00000412272 WWC2-AS2Q96NR7 200 aa2.83□□□□□ -1.96
HERC4-205ENST00000412272 FLNBO75369 2602 aaKnown RBP2.83□□□□□ -1.96
HERC4-205ENST00000412272 HTN3P15516 51 aa2.82□□□□□ -1.96
HERC4-205ENST00000412272 DEFB123Q8N688 67 aa2.82□□□□□ -1.96
HERC4-205ENST00000412272 KRTAP1-3Q8IUG1 177 aa2.81□□□□□ -1.96
HERC4-205ENST00000412272 SETXQ7Z333 2677 aaKnown RBP2.81□□□□□ -1.96
HERC4-205ENST00000412272 FRAS1Q86XX4 4008 aa2.81□□□□□ -1.96
HERC4-205ENST00000412272 SRRM2Q9UQ35 2752 aaKnown RBP2.81□□□□□ -1.96
HERC4-205ENST00000412272 VPS13DQ5THJ4 4388 aa2.81□□□□□ -1.96
HERC4-205ENST00000412272 NBASA2RRP1 2371 aa2.81□□□□□ -1.96
HERC4-205ENST00000412272 EPG5Q9HCE0 2579 aa2.8□□□□□ -1.96
HERC4-205ENST00000412272 F8P00451 2351 aa2.8□□□□□ -1.96
HERC4-205ENST00000412272 KRTAP10-3P60369 221 aa2.8□□□□□ -1.96
HERC4-205ENST00000412272 SPINK1P00995 79 aa2.79□□□□□ -1.96
HERC4-205ENST00000412272 SPTAN1Q13813 2472 aaKnown RBP2.79□□□□□ -1.96
HERC4-205ENST00000412272 COX6B2Q6YFQ2 88 aa2.79□□□□□ -1.96
HERC4-205ENST00000412272 C14orf177Q52M58 125 aa2.78□□□□□ -1.96
HERC4-205ENST00000412272 PRO2289Q9P1D8 64 aa2.78□□□□□ -1.96
HERC4-205ENST00000412272 RYR3Q15413 4870 aa2.78□□□□□ -1.96
HERC4-205ENST00000412272 MAPK1IP1LQ8NDC0 245 aa2.78□□□□□ -1.96
HERC4-205ENST00000412272 NAV2Q8IVL1 2488 aa2.77□□□□□ -1.97
HERC4-205ENST00000412272 SPACA4Q8TDM5 124 aa2.77□□□□□ -1.97
HERC4-205ENST00000412272 TLN1Q9Y490 2541 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms