RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 SYCNQ0VAF6 134 aa1.99□□□□□ -2.09
CUL3-204ENST00000409777 ASB16-AS1Q495Z4 193 aa1.99□□□□□ -2.09
CUL3-204ENST00000409777 REG3GQ6UW15 175 aa1.99□□□□□ -2.09
CUL3-204ENST00000409777 BIRC6Q9NR09 4857 aa1.99□□□□□ -2.09
CUL3-204ENST00000409777 ANK2Q01484 3957 aa1.98□□□□□ -2.09
CUL3-204ENST00000409777 DEFB4AO15263 64 aa1.98□□□□□ -2.09
CUL3-204ENST00000409777 PSCAO43653 123 aa1.98□□□□□ -2.09
CUL3-204ENST00000409777 KRTAP10-2P60368 255 aa1.98□□□□□ -2.09
CUL3-204ENST00000409777 C1orf137Q5JT78 98 aa1.98□□□□□ -2.09
CUL3-204ENST00000409777 WNK1Q9H4A3 2382 aa1.98□□□□□ -2.09
CUL3-204ENST00000409777 USP9YO00507 2555 aaPredicted RBP1.98□□□□□ -2.09
CUL3-204ENST00000409777 RPL37AP8A6NKH3 93 aa1.98□□□□□ -2.09
CUL3-204ENST00000409777 HCG22E2RYF7 251 aa1.98□□□□□ -2.09
CUL3-204ENST00000409777 K7EQZ3 153 aa1.98□□□□□ -2.09
CUL3-204ENST00000409777 C9orf163Q8N9P6 203 aa1.98□□□□□ -2.09
CUL3-204ENST00000409777 PLAC8Q9NZF1 115 aa1.98□□□□□ -2.09
CUL3-204ENST00000409777 TRAV22A0A0B4J277 110 aa1.97□□□□□ -2.09
CUL3-204ENST00000409777 C3orf84H3BNL1 204 aa1.97□□□□□ -2.09
CUL3-204ENST00000409777 NDUFB1O75438 58 aa1.97□□□□□ -2.09
CUL3-204ENST00000409777 C1orf195Q5TG92 126 aa1.97□□□□□ -2.09
CUL3-204ENST00000409777 CMYA5Q8N3K9 4069 aa1.97□□□□□ -2.09
CUL3-204ENST00000409777 IGKV2D-24A0A075B6R9 120 aa1.97□□□□□ -2.09
CUL3-204ENST00000409777 ST20-AS1Q8NBB2 130 aa1.97□□□□□ -2.09
CUL3-204ENST00000409777 NBASA2RRP1 2371 aa1.97□□□□□ -2.09
CUL3-204ENST00000409777 DYNC2H1Q8NCM8 4307 aaKnown RBP1.97□□□□□ -2.09
CUL3-204ENST00000409777 H0Y9J4 135 aa1.97□□□□□ -2.09
CUL3-204ENST00000409777 BRK1Q8WUW1 75 aa1.97□□□□□ -2.09
CUL3-204ENST00000409777 LOC101927531A0A1B0GV80 90 aa1.96□□□□□ -2.1
CUL3-204ENST00000409777 Q5VV11 94 aa1.96□□□□□ -2.1
CUL3-204ENST00000409777 IGFL1Q6UW32 110 aa1.96□□□□□ -2.1
CUL3-204ENST00000409777 NKAPP1Q8N9T2 125 aa1.96□□□□□ -2.1
CUL3-204ENST00000409777 LINC00472Q9H8W2 130 aa1.96□□□□□ -2.1
CUL3-204ENST00000409777 NF1P21359 2839 aa1.96□□□□□ -2.1
CUL3-204ENST00000409777 HIVEP1P15822 2718 aa1.96□□□□□ -2.1
CUL3-204ENST00000409777 FAM168BA1KXE4 195 aa1.95□□□□□ -2.1
CUL3-204ENST00000409777 MRPL55Q7Z7F7 128 aaKnown RBP1.95□□□□□ -2.1
CUL3-204ENST00000409777 MPLKIPQ8TAP9 179 aa1.95□□□□□ -2.1
CUL3-204ENST00000409777 TLN2Q9Y4G6 2542 aa1.95□□□□□ -2.1
CUL3-204ENST00000409777 CNBPP62633 177 aaKnown RBP1.95□□□□□ -2.1
CUL3-204ENST00000409777 Q8N9P0 234 aaPredicted RBP1.95□□□□□ -2.1
CUL3-204ENST00000409777 PKIGQ9Y2B9 76 aa1.95□□□□□ -2.1
CUL3-204ENST00000409777 KRTAP10-11P60412 298 aa1.95□□□□□ -2.1
CUL3-204ENST00000409777 PCLOQ9Y6V0 5065 aa1.94□□□□□ -2.1
CUL3-204ENST00000409777 VWFP04275 2813 aa1.94□□□□□ -2.1
CUL3-204ENST00000409777 KRTAP13-1Q8IUC0 172 aa1.94□□□□□ -2.1
CUL3-204ENST00000409777 B9D2Q9BPU9 175 aa1.94□□□□□ -2.1
CUL3-204ENST00000409777 CENPEQ02224 2701 aa1.94□□□□□ -2.1
CUL3-204ENST00000409777 CREBBPQ92793 2442 aa1.94□□□□□ -2.1
CUL3-204ENST00000409777 JMJD1CQ15652 2540 aa1.94□□□□□ -2.1
CUL3-204ENST00000409777 IGLV7-46A0A075B6I9 117 aa1.94□□□□□ -2.1
CUL3-204ENST00000409777 A8MWP4 228 aa1.94□□□□□ -2.1
CUL3-204ENST00000409777 HTN3P15516 51 aa1.94□□□□□ -2.1
CUL3-204ENST00000409777 PMAIP1Q13794 54 aa1.94□□□□□ -2.1
CUL3-204ENST00000409777 CASC10Q5T4H9 136 aa1.94□□□□□ -2.1
CUL3-204ENST00000409777 Q6ZR54 194 aa1.94□□□□□ -2.1
CUL3-204ENST00000409777 DEFB105AQ8NG35 78 aa1.94□□□□□ -2.1
CUL3-204ENST00000409777 Q96NJ1 140 aa1.94□□□□□ -2.1
CUL3-204ENST00000409777 LIMD2Q9BT23 127 aa1.94□□□□□ -2.1
CUL3-204ENST00000409777 LRRK2Q5S007 2527 aa1.94□□□□□ -2.1
CUL3-204ENST00000409777 FLNAP21333 2647 aaKnown RBP1.94□□□□□ -2.1
CUL3-204ENST00000409777 POLQO75417 2590 aa1.94□□□□□ -2.1
CUL3-204ENST00000409777 MMP24-AS1A0A0U1RRL7 71 aa1.93□□□□□ -2.1
CUL3-204ENST00000409777 UBE2BP63146 152 aa1.93□□□□□ -2.1
CUL3-204ENST00000409777 TRRAPQ9Y4A5 3859 aa1.93□□□□□ -2.1
CUL3-204ENST00000409777 ALMS1Q8TCU4 4167 aa1.93□□□□□ -2.1
CUL3-204ENST00000409777 C16orf90A8MZG2 172 aa1.93□□□□□ -2.1
CUL3-204ENST00000409777 MP68P56378 58 aa1.93□□□□□ -2.1
CUL3-204ENST00000409777 Q8N1X5 172 aa1.93□□□□□ -2.1
CUL3-204ENST00000409777 A6NN06 94 aa1.92□□□□□ -2.1
CUL3-204ENST00000409777 A8MUN3 132 aa1.92□□□□□ -2.1
CUL3-204ENST00000409777 LINC00208Q96KT6 92 aa1.92□□□□□ -2.1
CUL3-204ENST00000409777 SMR3AQ99954 134 aa1.92□□□□□ -2.1
CUL3-204ENST00000409777 RYR3Q15413 4870 aa1.92□□□□□ -2.1
CUL3-204ENST00000409777 DEFB131BA0A096LNP1 70 aa1.92□□□□□ -2.1
CUL3-204ENST00000409777 H0Y9P7 68 aa1.92□□□□□ -2.1
CUL3-204ENST00000409777 UBE2AP49459 152 aa1.92□□□□□ -2.1
CUL3-204ENST00000409777 RPL37AP61513 92 aaKnown RBP1.92□□□□□ -2.1
CUL3-204ENST00000409777 KRTAP13-3Q3SY46 172 aa1.92□□□□□ -2.1
CUL3-204ENST00000409777 LINC00483Q53H64 154 aa1.92□□□□□ -2.1
CUL3-204ENST00000409777 PHF5AQ7RTV0 110 aaKnown RBP1.92□□□□□ -2.1
CUL3-204ENST00000409777 KRTAP11-1Q8IUC1 163 aa1.92□□□□□ -2.1
CUL3-204ENST00000409777 LINC01558Q9Y6Z2 57 aa1.92□□□□□ -2.1
CUL3-204ENST00000409777 LYSTQ99698 3801 aa1.92□□□□□ -2.1
CUL3-204ENST00000409777 A0A1W2PNN7 141 aa1.91□□□□□ -2.1
CUL3-204ENST00000409777 CHTF8P0CG12 524 aa1.91□□□□□ -2.1
CUL3-204ENST00000409777 CD164Q04900 197 aa1.91□□□□□ -2.1
CUL3-204ENST00000409777 CASC2Q6XLA1 102 aa1.91□□□□□ -2.1
CUL3-204ENST00000409777 ATP11AUNQ6ZP68 121 aa1.91□□□□□ -2.1
CUL3-204ENST00000409777 LCA10Q71F78 164 aa1.91□□□□□ -2.1
CUL3-204ENST00000409777 HUWE1Q7Z6Z7 4374 aaKnown RBP1.91□□□□□ -2.1
CUL3-204ENST00000409777 A0A087WSZ3 146 aa1.91□□□□□ -2.1
CUL3-204ENST00000409777 A0A096LNI7 61 aa1.91□□□□□ -2.1
CUL3-204ENST00000409777 TENM2Q9NT68 2774 aa1.91□□□□□ -2.1
CUL3-204ENST00000409777 F8P00451 2351 aa1.91□□□□□ -2.1
CUL3-204ENST00000409777 DNAH9Q9NYC9 4486 aa1.91□□□□□ -2.1
CUL3-204ENST00000409777 NBEAL2Q6ZNJ1 2754 aa1.91□□□□□ -2.1
CUL3-204ENST00000409777 A8MU10 97 aa1.91□□□□□ -2.1
CUL3-204ENST00000409777 PSPHP1O15172 72 aa1.91□□□□□ -2.1
CUL3-204ENST00000409777 MOBPQ13875 183 aa1.91□□□□□ -2.1
CUL3-204ENST00000409777 TP53AIP1Q9HCN2 124 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms