RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 HSBP1L1C9JCN9 74 aa8.13□□□□□ -1.11
NIF3L1-205ENST00000409588 PCP2Q8IVA1 136 aa8.13□□□□□ -1.11
NIF3L1-205ENST00000409588 ATOH7Q8N100 152 aa8.13□□□□□ -1.11
NIF3L1-205ENST00000409588 PRO1933Q9H354 126 aa8.12□□□□□ -1.11
NIF3L1-205ENST00000409588 VAMP3Q15836 100 aa8.11□□□□□ -1.11
NIF3L1-205ENST00000409588 MUC17Q685J3 4493 aa8.1□□□□□ -1.11
NIF3L1-205ENST00000409588 HIST3H2BBQ8N257 126 aa8.1□□□□□ -1.11
NIF3L1-205ENST00000409588 HIST1H2BLQ99880 126 aa8.1□□□□□ -1.11
NIF3L1-205ENST00000409588 IGLV5-48A0A075B6I7 105 aa8.09□□□□□ -1.11
NIF3L1-205ENST00000409588 S100A6P06703 90 aa8.09□□□□□ -1.11
NIF3L1-205ENST00000409588 DEFB105AQ8NG35 78 aa8.09□□□□□ -1.11
NIF3L1-205ENST00000409588 Q5XG85 94 aa8.08□□□□□ -1.12
NIF3L1-205ENST00000409588 H7C2G1 150 aa8.06□□□□□ -1.12
NIF3L1-205ENST00000409588 SMIM11BQ8TCY0 68 aa8.06□□□□□ -1.12
NIF3L1-205ENST00000409588 Q1RN00 199 aa8.05□□□□□ -1.12
NIF3L1-205ENST00000409588 SMIM29Q86T20 159 aa8.05□□□□□ -1.12
NIF3L1-205ENST00000409588 LINC01547P58512 204 aaPredicted RBP8.04□□□□□ -1.12
NIF3L1-205ENST00000409588 HRCT1Q6UXD1 115 aa8.03□□□□□ -1.12
NIF3L1-205ENST00000409588 KRTAP9-8Q9BYQ0 159 aa8.03□□□□□ -1.12
NIF3L1-205ENST00000409588 FAT4Q6V0I7 4981 aa8.03□□□□□ -1.12
NIF3L1-205ENST00000409588 SCGB1D1O95968 90 aa8□□□□□ -1.13
NIF3L1-205ENST00000409588 LINC00575Q6W349 94 aa8□□□□□ -1.13
NIF3L1-205ENST00000409588 hADV29S1A0JD25 119 aa7.99□□□□□ -1.13
NIF3L1-205ENST00000409588 F8WEM9 126 aa7.99□□□□□ -1.13
NIF3L1-205ENST00000409588 DLEU1O43261 78 aa7.98□□□□□ -1.13
NIF3L1-205ENST00000409588 TCL1BO95988 128 aa7.98□□□□□ -1.13
NIF3L1-205ENST00000409588 BVES-AS1Q5T3Y7 98 aa7.98□□□□□ -1.13
NIF3L1-205ENST00000409588 HIST1H4GQ99525 98 aa7.98□□□□□ -1.13
NIF3L1-205ENST00000409588 Q6JHZ5 121 aa7.97□□□□□ -1.13
NIF3L1-205ENST00000409588 PPDPFLQ8WWR9 84 aa7.97□□□□□ -1.13
NIF3L1-205ENST00000409588 SNCGO76070 127 aa7.96□□□□□ -1.14
NIF3L1-205ENST00000409588 COX8AP10176 69 aa7.96□□□□□ -1.14
NIF3L1-205ENST00000409588 C1orf195Q5TG92 126 aa7.95□□□□□ -1.14
NIF3L1-205ENST00000409588 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.95□□□□□ -1.14
NIF3L1-205ENST00000409588 IGLV8-61A0A075B6I0 122 aa7.93□□□□□ -1.14
NIF3L1-205ENST00000409588 Q6ZQY7 126 aa7.93□□□□□ -1.14
NIF3L1-205ENST00000409588 HIGD1BQ9P298 99 aa7.92□□□□□ -1.14
NIF3L1-205ENST00000409588 OCIAD2Q56VL3 154 aa7.91□□□□□ -1.14
NIF3L1-205ENST00000409588 KRTAP4-1Q9BYQ7 146 aa7.91□□□□□ -1.14
NIF3L1-205ENST00000409588 C9orf92A6NGG3 77 aa7.9□□□□□ -1.14
NIF3L1-205ENST00000409588 H0YGX0 51 aa7.9□□□□□ -1.14
NIF3L1-205ENST00000409588 SNHG12Q9BXW3 62 aa7.9□□□□□ -1.14
NIF3L1-205ENST00000409588 CLEC2BQ92478 149 aa7.89□□□□□ -1.15
NIF3L1-205ENST00000409588 RAB37Q96AX2 223 aa7.88□□□□□ -1.15
NIF3L1-205ENST00000409588 A0A0G2JQZ4 141 aa7.87□□□□□ -1.15
NIF3L1-205ENST00000409588 PCOTHQ58A44 107 aa7.87□□□□□ -1.15
NIF3L1-205ENST00000409588 C12orf57Q99622 126 aa7.87□□□□□ -1.15
NIF3L1-205ENST00000409588 A0A0B4J2C4 111 aa7.86□□□□□ -1.15
NIF3L1-205ENST00000409588 TRBV7-7A0A0K0K1E9 115 aa7.86□□□□□ -1.15
NIF3L1-205ENST00000409588 CFC1BP0CG36 223 aa7.86□□□□□ -1.15
NIF3L1-205ENST00000409588 CFC1P0CG37 223 aa7.86□□□□□ -1.15
NIF3L1-205ENST00000409588 C14orf144Q96I85 54 aa7.86□□□□□ -1.15
NIF3L1-205ENST00000409588 SPATA45Q537H7 98 aa7.85□□□□□ -1.15
NIF3L1-205ENST00000409588 IGFL1Q6UW32 110 aa7.85□□□□□ -1.15
NIF3L1-205ENST00000409588 VAMP8Q9BV40 100 aa7.84□□□□□ -1.15
NIF3L1-205ENST00000409588 A0A1B0GX51 115 aa7.83□□□□□ -1.16
NIF3L1-205ENST00000409588 PAM16Q9Y3D7 125 aa7.83□□□□□ -1.16
NIF3L1-205ENST00000409588 RPL37P61927 97 aaKnown RBP7.82□□□□□ -1.16
NIF3L1-205ENST00000409588 Q6Q795 121 aa7.81□□□□□ -1.16
NIF3L1-205ENST00000409588 CEND1Q8N111 149 aa7.8□□□□□ -1.16
NIF3L1-205ENST00000409588 SS18L2Q9UHA2 77 aa7.8□□□□□ -1.16
NIF3L1-205ENST00000409588 PRO1854Q9UHT4 67 aa7.8□□□□□ -1.16
NIF3L1-205ENST00000409588 LST1O00453 97 aa7.79□□□□□ -1.16
NIF3L1-205ENST00000409588 C2orf91Q6ZV80 131 aa7.78□□□□□ -1.16
NIF3L1-205ENST00000409588 TEN1Q86WV5 123 aa7.78□□□□□ -1.16
NIF3L1-205ENST00000409588 H3BQ85 93 aa7.77□□□□□ -1.17
NIF3L1-205ENST00000409588 NDUFV3P56181 108 aaKnown RBP7.77□□□□□ -1.17
NIF3L1-205ENST00000409588 H3BUT2 72 aa7.74□□□□□ -1.17
NIF3L1-205ENST00000409588 KRTAP19-2Q3LHN2 52 aa7.74□□□□□ -1.17
NIF3L1-205ENST00000409588 ATP11AUNQ6ZP68 121 aa7.73□□□□□ -1.17
NIF3L1-205ENST00000409588 FAM218AQ96MZ4 157 aa7.73□□□□□ -1.17
NIF3L1-205ENST00000409588 H3BMG7 143 aa7.72□□□□□ -1.17
NIF3L1-205ENST00000409588 Q75L30 129 aa7.72□□□□□ -1.17
NIF3L1-205ENST00000409588 COX6CP09669 75 aa7.71□□□□□ -1.18
NIF3L1-205ENST00000409588 FABP2P12104 132 aa7.7□□□□□ -1.18
NIF3L1-205ENST00000409588 OBSCN-AS1Q96MR7 158 aa7.7□□□□□ -1.18
NIF3L1-205ENST00000409588 DNAL4O96015 105 aa7.69□□□□□ -1.18
NIF3L1-205ENST00000409588 FXYD2P54710 66 aa7.69□□□□□ -1.18
NIF3L1-205ENST00000409588 HSD52Q0P140 79 aa7.69□□□□□ -1.18
NIF3L1-205ENST00000409588 MT1HP80294 61 aa7.68□□□□□ -1.18
NIF3L1-205ENST00000409588 KRTAP3-1Q9BYR8 98 aa7.68□□□□□ -1.18
NIF3L1-205ENST00000409588 TMEM256-PLSCR3K7ERE1 68 aa7.67□□□□□ -1.18
NIF3L1-205ENST00000409588 TRIAP1O43715 76 aa7.67□□□□□ -1.18
NIF3L1-205ENST00000409588 A0A087WSZ3 146 aa7.66□□□□□ -1.18
NIF3L1-205ENST00000409588 PSMB2P49721 201 aa7.66□□□□□ -1.18
NIF3L1-205ENST00000409588 PYY3Q5JQD4 70 aa7.66□□□□□ -1.18
NIF3L1-205ENST00000409588 ORMDL1Q9P0S3 153 aa7.66□□□□□ -1.18
NIF3L1-205ENST00000409588 COX6B2Q6YFQ2 88 aa7.65□□□□□ -1.18
NIF3L1-205ENST00000409588 Q96NJ1 140 aa7.65□□□□□ -1.18
NIF3L1-205ENST00000409588 TRBV7-4A0A0J9YYF1 115 aa7.64□□□□□ -1.19
NIF3L1-205ENST00000409588 ANKRD29Q8N6D5 301 aa7.64□□□□□ -1.19
NIF3L1-205ENST00000409588 UQCR10Q9UDW1 63 aa7.63□□□□□ -1.19
NIF3L1-205ENST00000409588 C20orf166-AS1Q96NR2 134 aa7.62□□□□□ -1.19
NIF3L1-205ENST00000409588 A0A1W2PNM2 257 aa7.61□□□□□ -1.19
NIF3L1-205ENST00000409588 A8MUU9 505 aa7.6□□□□□ -1.19
NIF3L1-205ENST00000409588 UBE2V1Q13404 147 aa7.6□□□□□ -1.19
NIF3L1-205ENST00000409588 M0R2T5 61 aa7.59□□□□□ -1.19
NIF3L1-205ENST00000409588 TRACP01848 142 aa7.58□□□□□ -1.2
NIF3L1-205ENST00000409588 K7ERJ3 54 aa7.56□□□□□ -1.2
NIF3L1-205ENST00000409588 SCGB1C2P0DMR2 95 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms