RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 DEPDC5O75140 1603 aa0.49□□□□□ -2.33
PTPN12-202ENST00000407343 ADCY10Q96PN6 1610 aa0.49□□□□□ -2.33
PTPN12-202ENST00000407343 EFCAB6Q5THR3 1501 aa0.48□□□□□ -2.33
PTPN12-202ENST00000407343 SPINK4O60575 86 aa0.48□□□□□ -2.33
PTPN12-202ENST00000407343 DEFB109BQ30KR1 87 aa0.48□□□□□ -2.33
PTPN12-202ENST00000407343 ZFYVE26Q68DK2 2539 aa0.48□□□□□ -2.33
PTPN12-202ENST00000407343 KNL1Q8NG31 2342 aa0.48□□□□□ -2.33
PTPN12-202ENST00000407343 UNC79Q9P2D8 2635 aa0.47□□□□□ -2.33
PTPN12-202ENST00000407343 SERF2P84101 59 aa0.47□□□□□ -2.33
PTPN12-202ENST00000407343 SPINK6Q6UWN8 80 aa0.47□□□□□ -2.33
PTPN12-202ENST00000407343 SPTA1P02549 2419 aa0.47□□□□□ -2.33
PTPN12-202ENST00000407343 PKDREJQ9NTG1 2253 aa0.47□□□□□ -2.33
PTPN12-202ENST00000407343 ABCA2Q9BZC7 2435 aa0.46□□□□□ -2.34
PTPN12-202ENST00000407343 HECTD1Q9ULT8 2610 aa0.46□□□□□ -2.34
PTPN12-202ENST00000407343 PRRC2CQ9Y520 2896 aaKnown RBP0.46□□□□□ -2.34
PTPN12-202ENST00000407343 DEFB130BP0DP73 79 aa0.46□□□□□ -2.34
PTPN12-202ENST00000407343 DEFB130AP0DP74 79 aa0.46□□□□□ -2.34
PTPN12-202ENST00000407343 KIAA0586Q9BVV6 1533 aa0.46□□□□□ -2.34
PTPN12-202ENST00000407343 CACNA1AO00555 2505 aa0.46□□□□□ -2.34
PTPN12-202ENST00000407343 IAPPP10997 89 aa0.45□□□□□ -2.34
PTPN12-202ENST00000407343 PLNP26678 52 aa0.45□□□□□ -2.34
PTPN12-202ENST00000407343 ABCA5Q8WWZ7 1642 aa0.45□□□□□ -2.34
PTPN12-202ENST00000407343 NRXN3Q9Y4C0 1643 aa0.45□□□□□ -2.34
PTPN12-202ENST00000407343 ABCC8Q09428 1581 aa0.45□□□□□ -2.34
PTPN12-202ENST00000407343 WNK2Q9Y3S1 2297 aa0.44□□□□□ -2.34
PTPN12-202ENST00000407343 MINOS1Q5TGZ0 78 aa0.44□□□□□ -2.34
PTPN12-202ENST00000407343 CMC2Q9NRP2 79 aa0.44□□□□□ -2.34
PTPN12-202ENST00000407343 CHD8Q9HCK8 2581 aa0.44□□□□□ -2.34
PTPN12-202ENST00000407343 PKD1L1Q8TDX9 2849 aa0.43□□□□□ -2.34
PTPN12-202ENST00000407343 SYNE2Q8WXH0 6885 aaKnown RBP0.43□□□□□ -2.34
PTPN12-202ENST00000407343 RPS27P42677 84 aaKnown RBP0.43□□□□□ -2.34
PTPN12-202ENST00000407343 RPS27LQ71UM5 84 aaKnown RBP0.43□□□□□ -2.34
PTPN12-202ENST00000407343 ALMS1Q8TCU4 4167 aa0.43□□□□□ -2.34
PTPN12-202ENST00000407343 A0A1B0GUL6 1792 aa0.42□□□□□ -2.34
PTPN12-202ENST00000407343 IGF2RP11717 2491 aa0.42□□□□□ -2.34
PTPN12-202ENST00000407343 PDE4DIPQ5VU43 2346 aa0.42□□□□□ -2.34
PTPN12-202ENST00000407343 TOGARAM1Q9Y4F4 1720 aa0.42□□□□□ -2.34
PTPN12-202ENST00000407343 MACF1Q9UPN3 7388 aaKnown RBP0.42□□□□□ -2.34
PTPN12-202ENST00000407343 C6orf48Q9UBA6 75 aa0.42□□□□□ -2.34
PTPN12-202ENST00000407343 TNXBP22105 4242 aa0.42□□□□□ -2.34
PTPN12-202ENST00000407343 SETXQ7Z333 2677 aaKnown RBP0.42□□□□□ -2.34
PTPN12-202ENST00000407343 FAT4Q6V0I7 4981 aa0.42□□□□□ -2.34
PTPN12-202ENST00000407343 ANKRD36CQ5JPF3 1778 aa0.42□□□□□ -2.34
PTPN12-202ENST00000407343 NCOR1O75376 2440 aa0.41□□□□□ -2.34
PTPN12-202ENST00000407343 H0YGX0 51 aa0.41□□□□□ -2.34
PTPN12-202ENST00000407343 SPINK1P00995 79 aa0.41□□□□□ -2.34
PTPN12-202ENST00000407343 LINC00308Q8TCZ7 52 aa0.41□□□□□ -2.34
PTPN12-202ENST00000407343 SYNE1Q8NF91 8797 aaKnown RBP0.41□□□□□ -2.34
PTPN12-202ENST00000407343 PTPN13Q12923 2485 aa0.41□□□□□ -2.34
PTPN12-202ENST00000407343 SMIM27A0A1W2PRY6 76 aa0.4□□□□□ -2.35
PTPN12-202ENST00000407343 LINC01546A6NGU7 62 aa0.4□□□□□ -2.35
PTPN12-202ENST00000407343 TMEM167BQ9NRX6 74 aa0.4□□□□□ -2.35
PTPN12-202ENST00000407343 TNRC18O15417 2968 aaPredicted RBP0.4□□□□□ -2.35
PTPN12-202ENST00000407343 MAP1BP46821 2468 aaKnown RBP0.4□□□□□ -2.35
PTPN12-202ENST00000407343 CSPG4Q6UVK1 2322 aa0.39□□□□□ -2.35
PTPN12-202ENST00000407343 CDC42BPAQ5VT25 1732 aa0.39□□□□□ -2.35
PTPN12-202ENST00000407343 ABRACLQ9P1F3 81 aa0.39□□□□□ -2.35
PTPN12-202ENST00000407343 U3KQA8 63 aa0.39□□□□□ -2.35
PTPN12-202ENST00000407343 UBR5O95071 2799 aaPredicted RBP0.39□□□□□ -2.35
PTPN12-202ENST00000407343 EP300Q09472 2414 aaPredicted RBP0.38□□□□□ -2.35
PTPN12-202ENST00000407343 CREBBPQ92793 2442 aa0.38□□□□□ -2.35
PTPN12-202ENST00000407343 CELSR1Q9NYQ6 3014 aa0.38□□□□□ -2.35
PTPN12-202ENST00000407343 FSIP2Q5CZC0 6907 aa0.38□□□□□ -2.35
PTPN12-202ENST00000407343 PRM1P04553 51 aa0.38□□□□□ -2.35
PTPN12-202ENST00000407343 WT1-ASQ06250 92 aa0.38□□□□□ -2.35
PTPN12-202ENST00000407343 TOMM5Q8N4H5 51 aa0.38□□□□□ -2.35
PTPN12-202ENST00000407343 PCNX1Q96RV3 2341 aa0.37□□□□□ -2.35
PTPN12-202ENST00000407343 IQGAP2Q13576 1575 aa0.37□□□□□ -2.35
PTPN12-202ENST00000407343 S4R3F8 94 aa0.37□□□□□ -2.35
PTPN12-202ENST00000407343 NSD1Q96L73 2696 aaPredicted RBP0.37□□□□□ -2.35
PTPN12-202ENST00000407343 CEP290O15078 2479 aa0.37□□□□□ -2.35
PTPN12-202ENST00000407343 LMO7Q8WWI1 1683 aa0.37□□□□□ -2.35
PTPN12-202ENST00000407343 KMT2DO14686 5537 aa0.36□□□□□ -2.35
PTPN12-202ENST00000407343 PRKDCP78527 4128 aaKnown RBP0.36□□□□□ -2.35
PTPN12-202ENST00000407343 NF1P21359 2839 aa0.36□□□□□ -2.35
PTPN12-202ENST00000407343 NAV2Q8IVL1 2488 aa0.36□□□□□ -2.35
PTPN12-202ENST00000407343 M0R2T5 61 aa0.36□□□□□ -2.35
PTPN12-202ENST00000407343 DEFB135Q30KP9 77 aa0.36□□□□□ -2.35
PTPN12-202ENST00000407343 FAT2Q9NYQ8 4349 aa0.36□□□□□ -2.35
PTPN12-202ENST00000407343 TOP2AP11388 1531 aaKnown RBP0.36□□□□□ -2.35
PTPN12-202ENST00000407343 IQGAP1P46940 1657 aa0.36□□□□□ -2.35
PTPN12-202ENST00000407343 PDZD2O15018 2839 aa0.36□□□□□ -2.35
PTPN12-202ENST00000407343 HIVEP3Q5T1R4 2406 aa0.35□□□□□ -2.35
PTPN12-202ENST00000407343 FLNCQ14315 2725 aa0.35□□□□□ -2.35
PTPN12-202ENST00000407343 TFF3Q07654 80 aa0.35□□□□□ -2.35
PTPN12-202ENST00000407343 DEFB106AQ8N104 65 aa0.35□□□□□ -2.35
PTPN12-202ENST00000407343 TIMM8BQ9Y5J9 83 aaPredicted RBP0.35□□□□□ -2.35
PTPN12-202ENST00000407343 MDN1Q9NU22 5596 aa0.35□□□□□ -2.35
PTPN12-202ENST00000407343 IGSF10Q6WRI0 2623 aa0.35□□□□□ -2.35
PTPN12-202ENST00000407343 BSNQ9UPA5 3926 aa0.35□□□□□ -2.35
PTPN12-202ENST00000407343 KIF21BO75037 1637 aa0.35□□□□□ -2.35
PTPN12-202ENST00000407343 NFAT5O94916 1531 aa0.34□□□□□ -2.35
PTPN12-202ENST00000407343 FAM208AQ9UK61 1670 aaKnown RBP0.34□□□□□ -2.35
PTPN12-202ENST00000407343 PRLHP81277 87 aa0.34□□□□□ -2.36
PTPN12-202ENST00000407343 FLNBO75369 2602 aaKnown RBP0.34□□□□□ -2.36
PTPN12-202ENST00000407343 HUWE1Q7Z6Z7 4374 aaKnown RBP0.33□□□□□ -2.36
PTPN12-202ENST00000407343 MROH2BQ7Z745 1585 aa0.33□□□□□ -2.36
PTPN12-202ENST00000407343 SRRM2Q9UQ35 2752 aaKnown RBP0.33□□□□□ -2.36
PTPN12-202ENST00000407343 KRTAP20-1Q3LI63 56 aa0.33□□□□□ -2.36
PTPN12-202ENST00000407343 NCOR2Q9Y618 2525 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms