RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 HINT1P49773 126 aaPredicted RBP2.56□□□□□ -2
HMGB3P19-201ENST00000403971 NPC2P61916 151 aa2.56□□□□□ -2
HMGB3P19-201ENST00000403971 Q6ZSA8 131 aa2.56□□□□□ -2
HMGB3P19-201ENST00000403971 SPACA4Q8TDM5 124 aa2.56□□□□□ -2
HMGB3P19-201ENST00000403971 PKHD1P08F94 4074 aa2.56□□□□□ -2
HMGB3P19-201ENST00000403971 APOBP04114 4563 aaKnown RBP2.56□□□□□ -2
HMGB3P19-201ENST00000403971 IGKV2-24A0A0C4DH68 120 aa2.55□□□□□ -2
HMGB3P19-201ENST00000403971 M0R378 163 aa2.55□□□□□ -2
HMGB3P19-201ENST00000403971 C6orf99Q4VX62 202 aa2.55□□□□□ -2
HMGB3P19-201ENST00000403971 SNHG12Q9BXW3 62 aa2.55□□□□□ -2
HMGB3P19-201ENST00000403971 TMEM126AQ9H061 195 aa2.55□□□□□ -2
HMGB3P19-201ENST00000403971 NHP2Q9NX24 153 aaKnown RBP2.55□□□□□ -2
HMGB3P19-201ENST00000403971 PLAC8Q9NZF1 115 aa2.55□□□□□ -2
HMGB3P19-201ENST00000403971 PRO1854Q9UHT4 67 aa2.55□□□□□ -2
HMGB3P19-201ENST00000403971 A0A1W2PNN7 141 aa2.54□□□□□ -2
HMGB3P19-201ENST00000403971 IGLV6-57P01721 117 aa2.54□□□□□ -2
HMGB3P19-201ENST00000403971 KRTAP10-1P60331 282 aa2.54□□□□□ -2
HMGB3P19-201ENST00000403971 LUZP6Q538Z0 58 aa2.54□□□□□ -2
HMGB3P19-201ENST00000403971 COL5A1-AS1Q5SY13 56 aa2.54□□□□□ -2
HMGB3P19-201ENST00000403971 LINC00337Q8N6G1 96 aa2.54□□□□□ -2
HMGB3P19-201ENST00000403971 Q8NDZ9 215 aa2.54□□□□□ -2
HMGB3P19-201ENST00000403971 RAB37Q96AX2 223 aa2.54□□□□□ -2
HMGB3P19-201ENST00000403971 C22orf24Q9Y442 160 aa2.54□□□□□ -2
HMGB3P19-201ENST00000403971 TRBV10-3A0A0K0K1G6 114 aa2.53□□□□□ -2
HMGB3P19-201ENST00000403971 M0QXV9 152 aa2.53□□□□□ -2
HMGB3P19-201ENST00000403971 FUSP35637 526 aaKnown RBP eCLIP2.53□□□□□ -2
HMGB3P19-201ENST00000403971 RPL28P46779 137 aaKnown RBP2.53□□□□□ -2
HMGB3P19-201ENST00000403971 S100A7L2Q5SY68 101 aa2.53□□□□□ -2
HMGB3P19-201ENST00000403971 DPH3Q96FX2 82 aa2.53□□□□□ -2
HMGB3P19-201ENST00000403971 KCNQ1DNQ9H478 68 aa2.53□□□□□ -2
HMGB3P19-201ENST00000403971 FAT1Q14517 4588 aa2.52□□□□□ -2.01
HMGB3P19-201ENST00000403971 TRBV7-6A0A0J9YX20 115 aa2.52□□□□□ -2.01
HMGB3P19-201ENST00000403971 TAX1BP3O14907 124 aa2.52□□□□□ -2.01
HMGB3P19-201ENST00000403971 NCR3O14931 201 aa2.52□□□□□ -2.01
HMGB3P19-201ENST00000403971 SPRR1AP35321 89 aa2.52□□□□□ -2.01
HMGB3P19-201ENST00000403971 BATFQ16520 125 aa2.52□□□□□ -2.01
HMGB3P19-201ENST00000403971 LYRM7Q5U5X0 104 aa2.52□□□□□ -2.01
HMGB3P19-201ENST00000403971 FAM19A5Q7Z5A7 132 aaPredicted RBP2.52□□□□□ -2.01
HMGB3P19-201ENST00000403971 OR13C6PQ8NH95 151 aa2.52□□□□□ -2.01
HMGB3P19-201ENST00000403971 TRAV23DV6A0A075B6W5 121 aa2.51□□□□□ -2.01
HMGB3P19-201ENST00000403971 H0YGX0 51 aa2.51□□□□□ -2.01
HMGB3P19-201ENST00000403971 K7ERJ3 54 aa2.51□□□□□ -2.01
HMGB3P19-201ENST00000403971 COX6CP09669 75 aa2.51□□□□□ -2.01
HMGB3P19-201ENST00000403971 VAMP3Q15836 100 aa2.51□□□□□ -2.01
HMGB3P19-201ENST00000403971 SCXQ7RTU7 201 aa2.51□□□□□ -2.01
HMGB3P19-201ENST00000403971 PHF5AQ7RTV0 110 aaKnown RBP2.51□□□□□ -2.01
HMGB3P19-201ENST00000403971 SMIM11BQ8TCY0 68 aa2.51□□□□□ -2.01
HMGB3P19-201ENST00000403971 A0A1B0GX51 115 aa2.5□□□□□ -2.01
HMGB3P19-201ENST00000403971 H7C2G1 150 aa2.5□□□□□ -2.01
HMGB3P19-201ENST00000403971 ZNF73O43830 326 aaPredicted RBP2.5□□□□□ -2.01
HMGB3P19-201ENST00000403971 INAFM2P0DMQ5 153 aa2.5□□□□□ -2.01
HMGB3P19-201ENST00000403971 ELOF1P60002 83 aaKnown RBP2.5□□□□□ -2.01
HMGB3P19-201ENST00000403971 UBE2BP63146 152 aa2.5□□□□□ -2.01
HMGB3P19-201ENST00000403971 DIRC1Q969H9 104 aa2.5□□□□□ -2.01
HMGB3P19-201ENST00000403971 TRBV20-1A0A075B6N2 111 aa2.49□□□□□ -2.01
HMGB3P19-201ENST00000403971 ETDCA0A1B0GVM5 59 aa2.49□□□□□ -2.01
HMGB3P19-201ENST00000403971 A0A1W2PPM0 123 aa2.49□□□□□ -2.01
HMGB3P19-201ENST00000403971 H3BUT2 72 aa2.49□□□□□ -2.01
HMGB3P19-201ENST00000403971 PSPHP1O15172 72 aa2.49□□□□□ -2.01
HMGB3P19-201ENST00000403971 BCE1O60756 84 aa2.49□□□□□ -2.01
HMGB3P19-201ENST00000403971 SNCGO76070 127 aa2.49□□□□□ -2.01
HMGB3P19-201ENST00000403971 PSMB2P49721 201 aa2.49□□□□□ -2.01
HMGB3P19-201ENST00000403971 SPINT4Q6UDR6 99 aa2.49□□□□□ -2.01
HMGB3P19-201ENST00000403971 Q6ZRX8 168 aa2.49□□□□□ -2.01
HMGB3P19-201ENST00000403971 LINC00304Q8N9R0 145 aa2.49□□□□□ -2.01
HMGB3P19-201ENST00000403971 PSORS1C2Q9UIG4 136 aa2.49□□□□□ -2.01
HMGB3P19-201ENST00000403971 VPS13BQ7Z7G8 4022 aa2.49□□□□□ -2.01
HMGB3P19-201ENST00000403971 RYR1P21817 5038 aa2.49□□□□□ -2.01
HMGB3P19-201ENST00000403971 EPPK1P58107 5090 aaKnown RBP2.48□□□□□ -2.01
HMGB3P19-201ENST00000403971 HSPG2P98160 4391 aa2.48□□□□□ -2.01
HMGB3P19-201ENST00000403971 LST1O00453 97 aa2.48□□□□□ -2.01
HMGB3P19-201ENST00000403971 TRACP01848 142 aa2.48□□□□□ -2.01
HMGB3P19-201ENST00000403971 SCGB1C2P0DMR2 95 aa2.48□□□□□ -2.01
HMGB3P19-201ENST00000403971 FABP2P12104 132 aa2.48□□□□□ -2.01
HMGB3P19-201ENST00000403971 COX7BP24311 80 aa2.48□□□□□ -2.01
HMGB3P19-201ENST00000403971 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
HMGB3P19-201ENST00000403971 LCE1BQ5T7P3 118 aa2.48□□□□□ -2.01
HMGB3P19-201ENST00000403971 LINC00575Q6W349 94 aa2.48□□□□□ -2.01
HMGB3P19-201ENST00000403971 KRTAP13-1Q8IUC0 172 aa2.48□□□□□ -2.01
HMGB3P19-201ENST00000403971 H3BQ85 93 aa2.47□□□□□ -2.01
HMGB3P19-201ENST00000403971 SLC25A20O43772 301 aa2.47□□□□□ -2.01
HMGB3P19-201ENST00000403971 TCL1BO95988 128 aa2.47□□□□□ -2.01
HMGB3P19-201ENST00000403971 ATXN8Q156A1 80 aa2.47□□□□□ -2.01
HMGB3P19-201ENST00000403971 OCIAD2Q56VL3 154 aa2.47□□□□□ -2.01
HMGB3P19-201ENST00000403971 C1orf137Q5JT78 98 aa2.47□□□□□ -2.01
HMGB3P19-201ENST00000403971 GTF2H5Q6ZYL4 71 aa2.47□□□□□ -2.01
HMGB3P19-201ENST00000403971 FAM19A1Q7Z5A9 133 aa2.47□□□□□ -2.01
HMGB3P19-201ENST00000403971 NAA38Q9BRA0 125 aaKnown RBP2.47□□□□□ -2.01
HMGB3P19-201ENST00000403971 SPCS1Q9Y6A9 102 aa2.47□□□□□ -2.01
HMGB3P19-201ENST00000403971 IGHV6-1A0A0B4J1U7 121 aa2.46□□□□□ -2.02
HMGB3P19-201ENST00000403971 hADV29S1A0JD25 119 aa2.46□□□□□ -2.02
HMGB3P19-201ENST00000403971 DNAL4O96015 105 aa2.46□□□□□ -2.02
HMGB3P19-201ENST00000403971 IGLV7-43P04211 117 aa2.46□□□□□ -2.02
HMGB3P19-201ENST00000403971 PRLHP81277 87 aa2.46□□□□□ -2.02
HMGB3P19-201ENST00000403971 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.46□□□□□ -2.02
HMGB3P19-201ENST00000403971 SMCR5Q8TEV8 140 aa2.46□□□□□ -2.02
HMGB3P19-201ENST00000403971 PPDPFLQ8WWR9 84 aa2.46□□□□□ -2.02
HMGB3P19-201ENST00000403971 CLEC2BQ92478 149 aa2.46□□□□□ -2.02
HMGB3P19-201ENST00000403971 Q9BRP9 147 aa2.46□□□□□ -2.02
HMGB3P19-201ENST00000403971 KIAA1109Q2LD37 5005 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms