RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 TNP2Q05952 138 aa8.74□□□□□ -1.01
COL6A2-203ENST00000397763 TRAV22A0A0B4J277 110 aa8.74□□□□□ -1.01
COL6A2-203ENST00000397763 PSCAO43653 123 aa8.74□□□□□ -1.01
COL6A2-203ENST00000397763 A8MUN3 132 aa8.73□□□□□ -1.01
COL6A2-203ENST00000397763 HCG22E2RYF7 251 aa8.73□□□□□ -1.01
COL6A2-203ENST00000397763 A8MU10 97 aa8.73□□□□□ -1.01
COL6A2-203ENST00000397763 A0A087WSZ3 146 aa8.72□□□□□ -1.01
COL6A2-203ENST00000397763 LINC00208Q96KT6 92 aa8.72□□□□□ -1.01
COL6A2-203ENST00000397763 PMAIP1Q13794 54 aa8.72□□□□□ -1.01
COL6A2-203ENST00000397763 REG3GQ6UW15 175 aa8.71□□□□□ -1.01
COL6A2-203ENST00000397763 SPRR1AP35321 89 aa8.71□□□□□ -1.02
COL6A2-203ENST00000397763 IGFL1Q6UW32 110 aa8.7□□□□□ -1.02
COL6A2-203ENST00000397763 CHTF8P0CG12 524 aa8.7□□□□□ -1.02
COL6A2-203ENST00000397763 KRTAP24-1Q3LI83 254 aa8.7□□□□□ -1.02
COL6A2-203ENST00000397763 CMYA5Q8N3K9 4069 aa8.7□□□□□ -1.02
COL6A2-203ENST00000397763 TLX1NBP0CAT3 122 aa8.68□□□□□ -1.02
COL6A2-203ENST00000397763 MP68P56378 58 aa8.68□□□□□ -1.02
COL6A2-203ENST00000397763 ZCCHC13Q8WW36 166 aaKnown RBP8.68□□□□□ -1.02
COL6A2-203ENST00000397763 SPRR4Q96PI1 79 aa8.67□□□□□ -1.02
COL6A2-203ENST00000397763 Q1T7F1 81 aa8.67□□□□□ -1.02
COL6A2-203ENST00000397763 KRTAP11-1Q8IUC1 163 aa8.67□□□□□ -1.02
COL6A2-203ENST00000397763 KRTAP1-5Q9BYS1 174 aa8.66□□□□□ -1.02
COL6A2-203ENST00000397763 LCE6AA0A183 80 aa8.65□□□□□ -1.03
COL6A2-203ENST00000397763 PRR15Q8IV56 129 aa8.65□□□□□ -1.03
COL6A2-203ENST00000397763 PLA2G2DQ9UNK4 145 aa8.65□□□□□ -1.03
COL6A2-203ENST00000397763 PHF5AQ7RTV0 110 aaKnown RBP8.64□□□□□ -1.03
COL6A2-203ENST00000397763 SPTSSBQ8NFR3 76 aa8.63□□□□□ -1.03
COL6A2-203ENST00000397763 CHKB-CPT1BH3BT56 60 aa8.63□□□□□ -1.03
COL6A2-203ENST00000397763 IGLV5-37A0A075B6J1 123 aa8.63□□□□□ -1.03
COL6A2-203ENST00000397763 B9D2Q9BPU9 175 aa8.63□□□□□ -1.03
COL6A2-203ENST00000397763 DNAH1Q9P2D7 4330 aa8.62□□□□□ -1.03
COL6A2-203ENST00000397763 UBE2AP49459 152 aa8.62□□□□□ -1.03
COL6A2-203ENST00000397763 DNAH9Q9NYC9 4486 aa8.62□□□□□ -1.03
COL6A2-203ENST00000397763 H0Y9P7 68 aa8.6□□□□□ -1.03
COL6A2-203ENST00000397763 HUWE1Q7Z6Z7 4374 aaKnown RBP8.6□□□□□ -1.03
COL6A2-203ENST00000397763 PRR15LQ9BU68 103 aa8.6□□□□□ -1.03
COL6A2-203ENST00000397763 NDUFB1O75438 58 aa8.6□□□□□ -1.03
COL6A2-203ENST00000397763 A0A1B0GW54 56 aa8.59□□□□□ -1.03
COL6A2-203ENST00000397763 CD164Q04900 197 aa8.58□□□□□ -1.04
COL6A2-203ENST00000397763 C4orf48Q5BLP8 95 aa8.58□□□□□ -1.04
COL6A2-203ENST00000397763 CASC2Q6XLA1 102 aa8.58□□□□□ -1.04
COL6A2-203ENST00000397763 CYP4F30PQ9H0H9 118 aa8.58□□□□□ -1.04
COL6A2-203ENST00000397763 Q5VV11 94 aa8.56□□□□□ -1.04
COL6A2-203ENST00000397763 H0Y9J4 135 aa8.56□□□□□ -1.04
COL6A2-203ENST00000397763 DNAH7Q8WXX0 4024 aa8.55□□□□□ -1.04
COL6A2-203ENST00000397763 PCOTHQ58A44 107 aa8.54□□□□□ -1.04
COL6A2-203ENST00000397763 K7EIL1 84 aa8.54□□□□□ -1.04
COL6A2-203ENST00000397763 C16orf90A8MZG2 172 aa8.53□□□□□ -1.04
COL6A2-203ENST00000397763 UBE2DNLQ8IWF7 75 aa8.53□□□□□ -1.04
COL6A2-203ENST00000397763 PANO1I0J062 215 aa8.52□□□□□ -1.05
COL6A2-203ENST00000397763 A6NED7 52 aa8.51□□□□□ -1.05
COL6A2-203ENST00000397763 CNBPP62633 177 aaKnown RBP8.51□□□□□ -1.05
COL6A2-203ENST00000397763 Q8N9P0 234 aaPredicted RBP8.51□□□□□ -1.05
COL6A2-203ENST00000397763 DNAH3Q8TD57 4116 aa8.5□□□□□ -1.05
COL6A2-203ENST00000397763 IGLV9-49A0A0B4J1Y8 123 aa8.5□□□□□ -1.05
COL6A2-203ENST00000397763 KRTAP29-1A8MX34 341 aaPredicted RBP8.47□□□□□ -1.05
COL6A2-203ENST00000397763 COA5Q86WW8 74 aa8.46□□□□□ -1.06
COL6A2-203ENST00000397763 ANAPC11Q9NYG5 84 aa8.45□□□□□ -1.06
COL6A2-203ENST00000397763 SPAG11AQ6PDA7 123 aa8.45□□□□□ -1.06
COL6A2-203ENST00000397763 NDUFS5O43920 106 aa8.45□□□□□ -1.06
COL6A2-203ENST00000397763 LIMD2Q9BT23 127 aa8.45□□□□□ -1.06
COL6A2-203ENST00000397763 A8MWP4 228 aa8.43□□□□□ -1.06
COL6A2-203ENST00000397763 LINC00472Q9H8W2 130 aa8.43□□□□□ -1.06
COL6A2-203ENST00000397763 IGLV8-61A0A075B6I0 122 aa8.43□□□□□ -1.06
COL6A2-203ENST00000397763 LCA10Q71F78 164 aa8.42□□□□□ -1.06
COL6A2-203ENST00000397763 RBM12B-AS1Q9P1G2 102 aa8.41□□□□□ -1.06
COL6A2-203ENST00000397763 SPANXA2-OT1Q8N9U9 137 aa8.4□□□□□ -1.06
COL6A2-203ENST00000397763 TGP01266 2768 aa8.39□□□□□ -1.07
COL6A2-203ENST00000397763 PLECQ15149 4684 aaKnown RBP8.38□□□□□ -1.07
COL6A2-203ENST00000397763 C9orf163Q8N9P6 203 aa8.38□□□□□ -1.07
COL6A2-203ENST00000397763 MMP24-AS1A0A0U1RRL7 71 aa8.38□□□□□ -1.07
COL6A2-203ENST00000397763 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.38□□□□□ -1.07
COL6A2-203ENST00000397763 IGHV6-1A0A0B4J1U7 121 aa8.37□□□□□ -1.07
COL6A2-203ENST00000397763 FRAS1Q86XX4 4008 aa8.36□□□□□ -1.07
COL6A2-203ENST00000397763 H3BPC8 53 aa8.35□□□□□ -1.07
COL6A2-203ENST00000397763 KTN1-AS1Q86SY8 53 aa8.35□□□□□ -1.07
COL6A2-203ENST00000397763 APLNQ9ULZ1 77 aa8.35□□□□□ -1.07
COL6A2-203ENST00000397763 A0A087X002 238 aa8.33□□□□□ -1.08
COL6A2-203ENST00000397763 NOTCH2NLQ7Z3S9 236 aa8.33□□□□□ -1.08
COL6A2-203ENST00000397763 MOBPQ13875 183 aa8.33□□□□□ -1.08
COL6A2-203ENST00000397763 H3BS24 57 aa8.32□□□□□ -1.08
COL6A2-203ENST00000397763 SPRR1BP22528 89 aa8.32□□□□□ -1.08
COL6A2-203ENST00000397763 SPINK6Q6UWN8 80 aa8.32□□□□□ -1.08
COL6A2-203ENST00000397763 Q75L30 129 aa8.32□□□□□ -1.08
COL6A2-203ENST00000397763 IGLV7-46A0A075B6I9 117 aa8.32□□□□□ -1.08
COL6A2-203ENST00000397763 LOC101927531A0A1B0GV80 90 aa8.32□□□□□ -1.08
COL6A2-203ENST00000397763 ATP11AUNQ6ZP68 121 aa8.3□□□□□ -1.08
COL6A2-203ENST00000397763 Q96NJ1 140 aa8.3□□□□□ -1.08
COL6A2-203ENST00000397763 MDFIQ99750 246 aa8.29□□□□□ -1.08
COL6A2-203ENST00000397763 SPINK7P58062 85 aa8.29□□□□□ -1.08
COL6A2-203ENST00000397763 C14orf177Q52M58 125 aa8.29□□□□□ -1.08
COL6A2-203ENST00000397763 NBDYA0A0U1RRE5 68 aa8.28□□□□□ -1.08
COL6A2-203ENST00000397763 KRTAP13-1Q8IUC0 172 aa8.27□□□□□ -1.09
COL6A2-203ENST00000397763 CDK2AP2O75956 126 aa8.26□□□□□ -1.09
COL6A2-203ENST00000397763 C8orf17Q9NRJ1 99 aa8.26□□□□□ -1.09
COL6A2-203ENST00000397763 FBN3Q75N90 2809 aa8.26□□□□□ -1.09
COL6A2-203ENST00000397763 CDC42SE1Q9NRR8 79 aa8.25□□□□□ -1.09
COL6A2-203ENST00000397763 PRR26Q8N8Z3 221 aa8.25□□□□□ -1.09
COL6A2-203ENST00000397763 HRES1P13985 223 aa8.24□□□□□ -1.09
COL6A2-203ENST00000397763 MEGF8Q7Z7M0 2845 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms