RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 DPM2O94777 84 aa4.19□□□□□ -1.74
SCFD1-202ENST00000396629 KRTAP3-1Q9BYR8 98 aa4.19□□□□□ -1.74
SCFD1-202ENST00000396629 A0A1B0GWB2 263 aa4.19□□□□□ -1.74
SCFD1-202ENST00000396629 A8MUU9 505 aa4.19□□□□□ -1.74
SCFD1-202ENST00000396629 KRTAP5-3Q6L8H2 238 aa4.19□□□□□ -1.74
SCFD1-202ENST00000396629 LINC00518Q8N0U6 118 aa4.19□□□□□ -1.74
SCFD1-202ENST00000396629 Q96NJ1 140 aa4.19□□□□□ -1.74
SCFD1-202ENST00000396629 TRBV7-7A0A0K0K1E9 115 aa4.18□□□□□ -1.74
SCFD1-202ENST00000396629 TIMM17BO60830 172 aa4.18□□□□□ -1.74
SCFD1-202ENST00000396629 HSBP1O75506 76 aa4.18□□□□□ -1.74
SCFD1-202ENST00000396629 IGKCP01834 107 aa4.18□□□□□ -1.74
SCFD1-202ENST00000396629 FAM236DA0A1B0GTK5 79 aa4.17□□□□□ -1.74
SCFD1-202ENST00000396629 E9PLD3 99 aa4.17□□□□□ -1.74
SCFD1-202ENST00000396629 LEPROTL1O95214 131 aa4.17□□□□□ -1.74
SCFD1-202ENST00000396629 FAM236CP0DP71 79 aa4.17□□□□□ -1.74
SCFD1-202ENST00000396629 IGFL1Q6UW32 110 aa4.17□□□□□ -1.74
SCFD1-202ENST00000396629 PMCHL2Q9BQD1 86 aa4.17□□□□□ -1.74
SCFD1-202ENST00000396629 TRIAP1O43715 76 aa4.16□□□□□ -1.74
SCFD1-202ENST00000396629 MPLKIPQ8TAP9 179 aa4.16□□□□□ -1.74
SCFD1-202ENST00000396629 Q6JHZ5 121 aa4.15□□□□□ -1.75
SCFD1-202ENST00000396629 A4D1N5 150 aa4.14□□□□□ -1.75
SCFD1-202ENST00000396629 F8WEM9 126 aa4.14□□□□□ -1.75
SCFD1-202ENST00000396629 CLEC2BQ92478 149 aa4.14□□□□□ -1.75
SCFD1-202ENST00000396629 NHP2Q9NX24 153 aaKnown RBP4.14□□□□□ -1.75
SCFD1-202ENST00000396629 KRTAP16-1A8MUX0 517 aa4.13□□□□□ -1.75
SCFD1-202ENST00000396629 HRES1P13985 223 aa4.13□□□□□ -1.75
SCFD1-202ENST00000396629 LCE5AQ5TCM9 118 aa4.13□□□□□ -1.75
SCFD1-202ENST00000396629 YPEL4Q96NS1 127 aa4.13□□□□□ -1.75
SCFD1-202ENST00000396629 HSPB8Q9UJY1 196 aa4.13□□□□□ -1.75
SCFD1-202ENST00000396629 LST1O00453 97 aa4.12□□□□□ -1.75
SCFD1-202ENST00000396629 RBM12B-AS1Q9P1G2 102 aa4.12□□□□□ -1.75
SCFD1-202ENST00000396629 NEBP20929 6669 aa4.12□□□□□ -1.75
SCFD1-202ENST00000396629 SERF1AO75920 110 aa4.11□□□□□ -1.75
SCFD1-202ENST00000396629 FABP4P15090 132 aa4.11□□□□□ -1.75
SCFD1-202ENST00000396629 TRAV13-2A0A0B4J235 113 aa4.11□□□□□ -1.75
SCFD1-202ENST00000396629 OCIAD2Q56VL3 154 aa4.11□□□□□ -1.75
SCFD1-202ENST00000396629 A6NDN8 102 aa4.1□□□□□ -1.75
SCFD1-202ENST00000396629 ZNF815PA8K554 130 aa4.1□□□□□ -1.75
SCFD1-202ENST00000396629 KRTAP20-1Q3LI63 56 aa4.1□□□□□ -1.75
SCFD1-202ENST00000396629 SMIM11BQ8TCY0 68 aa4.09□□□□□ -1.76
SCFD1-202ENST00000396629 NOTCH2NLQ7Z3S9 236 aa4.08□□□□□ -1.76
SCFD1-202ENST00000396629 SLC7A5P1Q8MH63 180 aa4.08□□□□□ -1.76
SCFD1-202ENST00000396629 LINC00575Q6W349 94 aa4.07□□□□□ -1.76
SCFD1-202ENST00000396629 TTTY13Q9BZ97 58 aa4.07□□□□□ -1.76
SCFD1-202ENST00000396629 SNAPINO95295 136 aa4.07□□□□□ -1.76
SCFD1-202ENST00000396629 IFITM1P13164 125 aa4.07□□□□□ -1.76
SCFD1-202ENST00000396629 DSCR10P59022 87 aa4.07□□□□□ -1.76
SCFD1-202ENST00000396629 Q6ZQY7 126 aa4.07□□□□□ -1.76
SCFD1-202ENST00000396629 COPS9Q8WXC6 57 aa4.07□□□□□ -1.76
SCFD1-202ENST00000396629 MUC12Q9UKN1 5478 aa4.06□□□□□ -1.76
SCFD1-202ENST00000396629 APOC3P02656 99 aa4.06□□□□□ -1.76
SCFD1-202ENST00000396629 SS18L2Q9UHA2 77 aa4.06□□□□□ -1.76
SCFD1-202ENST00000396629 TRGC2P03986 189 aa4.05□□□□□ -1.76
SCFD1-202ENST00000396629 hADV29S1A0JD25 119 aa4.05□□□□□ -1.76
SCFD1-202ENST00000396629 VAMP3Q15836 100 aa4.05□□□□□ -1.76
SCFD1-202ENST00000396629 SVBPQ8N300 66 aa4.05□□□□□ -1.76
SCFD1-202ENST00000396629 A8MWP4 228 aa4.04□□□□□ -1.76
SCFD1-202ENST00000396629 SYS1-DBNDD2H3BUS1 97 aa4.04□□□□□ -1.76
SCFD1-202ENST00000396629 Q6ZVH6 145 aa4.04□□□□□ -1.76
SCFD1-202ENST00000396629 MUSTN1Q8IVN3 82 aa4.04□□□□□ -1.76
SCFD1-202ENST00000396629 PPDPFLQ8WWR9 84 aa4.04□□□□□ -1.76
SCFD1-202ENST00000396629 SCGB1D1O95968 90 aa4.03□□□□□ -1.76
SCFD1-202ENST00000396629 LINC01545Q5VT33 79 aa4.03□□□□□ -1.76
SCFD1-202ENST00000396629 MTURNQ8N3F0 131 aa4.03□□□□□ -1.76
SCFD1-202ENST00000396629 H3BUT2 72 aa4.02□□□□□ -1.77
SCFD1-202ENST00000396629 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.02□□□□□ -1.77
SCFD1-202ENST00000396629 SCGB1D4Q6XE38 83 aa4.02□□□□□ -1.77
SCFD1-202ENST00000396629 Q8N9P0 234 aaPredicted RBP4.02□□□□□ -1.77
SCFD1-202ENST00000396629 LINC00313P59037 77 aa4.02□□□□□ -1.77
SCFD1-202ENST00000396629 NDUFA5Q16718 116 aa4.02□□□□□ -1.77
SCFD1-202ENST00000396629 TEN1Q86WV5 123 aa4.02□□□□□ -1.77
SCFD1-202ENST00000396629 SNHG12Q9BXW3 62 aa4.01□□□□□ -1.77
SCFD1-202ENST00000396629 COLCA2A8K830 154 aa4□□□□□ -1.77
SCFD1-202ENST00000396629 PET117Q6UWS5 81 aa4□□□□□ -1.77
SCFD1-202ENST00000396629 A0A087WSZ3 146 aa3.99□□□□□ -1.77
SCFD1-202ENST00000396629 SIGMAR1Q99720 223 aa3.98□□□□□ -1.77
SCFD1-202ENST00000396629 KRTAP5-9P26371 169 aa3.95□□□□□ -1.78
SCFD1-202ENST00000396629 IGKV4-1P06312 121 aa3.94□□□□□ -1.78
SCFD1-202ENST00000396629 C3orf79P0CE67 100 aa3.94□□□□□ -1.78
SCFD1-202ENST00000396629 NDUFV3P56181 108 aaKnown RBP3.94□□□□□ -1.78
SCFD1-202ENST00000396629 SPINK7P58062 85 aa3.94□□□□□ -1.78
SCFD1-202ENST00000396629 BVES-AS1Q5T3Y7 98 aa3.94□□□□□ -1.78
SCFD1-202ENST00000396629 A0A1W2PNM2 257 aa3.92□□□□□ -1.78
SCFD1-202ENST00000396629 A6NN06 94 aa3.92□□□□□ -1.78
SCFD1-202ENST00000396629 C12orf57Q99622 126 aa3.92□□□□□ -1.78
SCFD1-202ENST00000396629 KRTAP2-3P0C7H8 128 aa3.92□□□□□ -1.78
SCFD1-202ENST00000396629 PCP4P48539 62 aa3.92□□□□□ -1.78
SCFD1-202ENST00000396629 ZCCHC13Q8WW36 166 aaKnown RBP3.92□□□□□ -1.78
SCFD1-202ENST00000396629 KRTAP2-4Q9BYR9 128 aa3.92□□□□□ -1.78
SCFD1-202ENST00000396629 MDN1Q9NU22 5596 aa3.91□□□□□ -1.78
SCFD1-202ENST00000396629 IGHV6-1A0A0B4J1U7 121 aa3.9□□□□□ -1.79
SCFD1-202ENST00000396629 H3BMG7 143 aa3.9□□□□□ -1.79
SCFD1-202ENST00000396629 LINC00472Q9H8W2 130 aa3.9□□□□□ -1.79
SCFD1-202ENST00000396629 HIST1H2BKO60814 126 aa3.89□□□□□ -1.79
SCFD1-202ENST00000396629 HIST1H2BJP06899 126 aa3.89□□□□□ -1.79
SCFD1-202ENST00000396629 HIST1H2BOP23527 126 aa3.89□□□□□ -1.79
SCFD1-202ENST00000396629 HIST1H2BBP33778 126 aa3.89□□□□□ -1.79
SCFD1-202ENST00000396629 HIST1H2BDP58876 126 aa3.89□□□□□ -1.79
SCFD1-202ENST00000396629 KRTDAPP60985 99 aa3.89□□□□□ -1.79
SCFD1-202ENST00000396629 HIST1H2BCP62807 126 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms