RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 ZNF462Q96JM2 2506 aa2.18□□□□□ -2.06
GABPB1-204ENST00000396464 RP1L1Q8IWN7 2480 aaPredicted RBP2.18□□□□□ -2.06
GABPB1-204ENST00000396464 EPG5Q9HCE0 2579 aa2.18□□□□□ -2.06
GABPB1-204ENST00000396464 FXYD6-FXYD2A0A087WZ82 144 aa2.17□□□□□ -2.06
GABPB1-204ENST00000396464 G3V318 75 aa2.17□□□□□ -2.06
GABPB1-204ENST00000396464 GAFA1Q96PS6 74 aa2.17□□□□□ -2.06
GABPB1-204ENST00000396464 SPTA1P02549 2419 aa2.17□□□□□ -2.06
GABPB1-204ENST00000396464 DCHS2Q6V1P9 2916 aa2.17□□□□□ -2.06
GABPB1-204ENST00000396464 MYO18BQ8IUG5 2567 aa2.17□□□□□ -2.06
GABPB1-204ENST00000396464 LY6G6CO95867 125 aa2.17□□□□□ -2.06
GABPB1-204ENST00000396464 LEAP2Q969E1 77 aa2.17□□□□□ -2.06
GABPB1-204ENST00000396464 CHD6Q8TD26 2715 aa2.16□□□□□ -2.06
GABPB1-204ENST00000396464 BAHCC1Q9P281 2608 aa2.16□□□□□ -2.06
GABPB1-204ENST00000396464 TPRP12270 2363 aaKnown RBP2.16□□□□□ -2.06
GABPB1-204ENST00000396464 PRB3Q04118 309 aaPredicted RBP2.16□□□□□ -2.06
GABPB1-204ENST00000396464 LINC00575Q6W349 94 aa2.16□□□□□ -2.06
GABPB1-204ENST00000396464 FLNCQ14315 2725 aa2.16□□□□□ -2.06
GABPB1-204ENST00000396464 ANKRD17O75179 2603 aaKnown RBP2.16□□□□□ -2.06
GABPB1-204ENST00000396464 ZFHX3Q15911 3703 aa2.15□□□□□ -2.06
GABPB1-204ENST00000396464 CELSR2Q9HCU4 2923 aa2.15□□□□□ -2.06
GABPB1-204ENST00000396464 ZFYVE26Q68DK2 2539 aa2.15□□□□□ -2.07
GABPB1-204ENST00000396464 HIVEP3Q5T1R4 2406 aa2.15□□□□□ -2.07
GABPB1-204ENST00000396464 TRAV21A0A0B4J279 112 aa2.15□□□□□ -2.07
GABPB1-204ENST00000396464 M0R1W7 72 aa2.15□□□□□ -2.07
GABPB1-204ENST00000396464 FXYD6Q9H0Q3 95 aa2.15□□□□□ -2.07
GABPB1-204ENST00000396464 KAAG1Q9UBP8 84 aa2.15□□□□□ -2.07
GABPB1-204ENST00000396464 ANKHD1Q8IWZ3 2542 aaKnown RBP2.15□□□□□ -2.07
GABPB1-204ENST00000396464 TACC2O95359 2948 aa2.15□□□□□ -2.07
GABPB1-204ENST00000396464 CSMD2Q7Z408 3487 aa2.14□□□□□ -2.07
GABPB1-204ENST00000396464 ASH1LQ9NR48 2969 aaKnown RBP2.14□□□□□ -2.07
GABPB1-204ENST00000396464 PCNX1Q96RV3 2341 aa2.14□□□□□ -2.07
GABPB1-204ENST00000396464 KRTAP10-10P60014 251 aa2.14□□□□□ -2.07
GABPB1-204ENST00000396464 HAMPP81172 84 aa2.14□□□□□ -2.07
GABPB1-204ENST00000396464 ATXN8Q156A1 80 aa2.14□□□□□ -2.07
GABPB1-204ENST00000396464 SPINK13Q1W4C9 94 aa2.14□□□□□ -2.07
GABPB1-204ENST00000396464 RPL39P5Q59GN2 51 aa2.14□□□□□ -2.07
GABPB1-204ENST00000396464 H3BUX3 64 aa2.13□□□□□ -2.07
GABPB1-204ENST00000396464 SMR3AQ99954 134 aa2.13□□□□□ -2.07
GABPB1-204ENST00000396464 DOPEY2Q9Y3R5 2298 aa2.13□□□□□ -2.07
GABPB1-204ENST00000396464 FBN2P35556 2912 aa2.13□□□□□ -2.07
GABPB1-204ENST00000396464 DOPEY1Q5JWR5 2465 aa2.12□□□□□ -2.07
GABPB1-204ENST00000396464 CENPEQ02224 2701 aa2.12□□□□□ -2.07
GABPB1-204ENST00000396464 NDUFB1O75438 58 aa2.12□□□□□ -2.07
GABPB1-204ENST00000396464 APELAP0DMC3 54 aa2.12□□□□□ -2.07
GABPB1-204ENST00000396464 RPL37P61927 97 aaKnown RBP2.12□□□□□ -2.07
GABPB1-204ENST00000396464 MINOS1Q5TGZ0 78 aa2.12□□□□□ -2.07
GABPB1-204ENST00000396464 NBASA2RRP1 2371 aa2.12□□□□□ -2.07
GABPB1-204ENST00000396464 TRBV6-1A0A0K0K1D8 114 aa2.11□□□□□ -2.07
GABPB1-204ENST00000396464 DEFB112Q30KQ8 113 aa2.11□□□□□ -2.07
GABPB1-204ENST00000396464 SPINK9Q5DT21 86 aa2.11□□□□□ -2.07
GABPB1-204ENST00000396464 USP9XQ93008 2570 aaPredicted RBP2.11□□□□□ -2.07
GABPB1-204ENST00000396464 CELSR1Q9NYQ6 3014 aa2.11□□□□□ -2.07
GABPB1-204ENST00000396464 APCP25054 2843 aa2.11□□□□□ -2.07
GABPB1-204ENST00000396464 VPS13CQ709C8 3753 aa2.11□□□□□ -2.07
GABPB1-204ENST00000396464 LRRK2Q5S007 2527 aa2.11□□□□□ -2.07
GABPB1-204ENST00000396464 A0A1B0GU69 56 aa2.1□□□□□ -2.07
GABPB1-204ENST00000396464 LINC00959A0A1B0GUT2 108 aa2.1□□□□□ -2.07
GABPB1-204ENST00000396464 IAPPP10997 89 aa2.1□□□□□ -2.07
GABPB1-204ENST00000396464 KRTAP6-3Q3LI67 103 aa2.1□□□□□ -2.07
GABPB1-204ENST00000396464 WFDC9Q8NEX5 89 aa2.1□□□□□ -2.07
GABPB1-204ENST00000396464 FAM103A1Q9BTL3 118 aaKnown RBP2.1□□□□□ -2.07
GABPB1-204ENST00000396464 CADP27708 2225 aa2.1□□□□□ -2.07
GABPB1-204ENST00000396464 PKDREJQ9NTG1 2253 aa2.1□□□□□ -2.07
GABPB1-204ENST00000396464 PLCE1Q9P212 2302 aa2.1□□□□□ -2.07
GABPB1-204ENST00000396464 SPTBN1Q01082 2364 aaKnown RBP2.1□□□□□ -2.07
GABPB1-204ENST00000396464 SNRPGP15A8MWD9 76 aa2.09□□□□□ -2.07
GABPB1-204ENST00000396464 NREPQ16612 68 aa2.09□□□□□ -2.07
GABPB1-204ENST00000396464 USP9YO00507 2555 aaPredicted RBP2.09□□□□□ -2.07
GABPB1-204ENST00000396464 HECTD1Q9ULT8 2610 aa2.09□□□□□ -2.07
GABPB1-204ENST00000396464 HELZ2Q9BYK8 2649 aaKnown RBP2.09□□□□□ -2.08
GABPB1-204ENST00000396464 PDZD2O15018 2839 aa2.08□□□□□ -2.08
GABPB1-204ENST00000396464 USF3Q68DE3 2245 aa2.08□□□□□ -2.08
GABPB1-204ENST00000396464 MAP1AP78559 2803 aaPredicted RBP2.08□□□□□ -2.08
GABPB1-204ENST00000396464 SPTAN1Q13813 2472 aaKnown RBP2.08□□□□□ -2.08
GABPB1-204ENST00000396464 CSMD1Q96PZ7 3565 aa2.08□□□□□ -2.08
GABPB1-204ENST00000396464 PRH1P02810 166 aa2.08□□□□□ -2.08
GABPB1-204ENST00000396464 PRCDQ00LT1 54 aa2.08□□□□□ -2.08
GABPB1-204ENST00000396464 SSBP3-AS1Q7Z2R9 100 aa2.08□□□□□ -2.08
GABPB1-204ENST00000396464 TMEM167AQ8TBQ9 72 aa2.08□□□□□ -2.08
GABPB1-204ENST00000396464 NMES1Q9C002 83 aa2.08□□□□□ -2.08
GABPB1-204ENST00000396464 OTOGQ6ZRI0 2925 aa2.07□□□□□ -2.08
GABPB1-204ENST00000396464 ABCA12Q86UK0 2595 aa2.07□□□□□ -2.08
GABPB1-204ENST00000396464 UNC79Q9P2D8 2635 aa2.07□□□□□ -2.08
GABPB1-204ENST00000396464 NBPF19A0A087WUL8 3843 aa2.07□□□□□ -2.08
GABPB1-204ENST00000396464 HMCN1Q96RW7 5635 aa2.07□□□□□ -2.08
GABPB1-204ENST00000396464 ABCA2Q9BZC7 2435 aa2.07□□□□□ -2.08
GABPB1-204ENST00000396464 PTPN13Q12923 2485 aa2.07□□□□□ -2.08
GABPB1-204ENST00000396464 ITPR3Q14573 2671 aa2.07□□□□□ -2.08
GABPB1-204ENST00000396464 NDUFA3O95167 84 aa2.07□□□□□ -2.08
GABPB1-204ENST00000396464 AKAP9Q99996 3911 aa2.07□□□□□ -2.08
GABPB1-204ENST00000396464 ROS1P08922 2347 aa2.07□□□□□ -2.08
GABPB1-204ENST00000396464 FASNP49327 2511 aaKnown RBP2.06□□□□□ -2.08
GABPB1-204ENST00000396464 FLNAP21333 2647 aaKnown RBP2.06□□□□□ -2.08
GABPB1-204ENST00000396464 POLQO75417 2590 aa2.06□□□□□ -2.08
GABPB1-204ENST00000396464 NAV2Q8IVL1 2488 aa2.06□□□□□ -2.08
GABPB1-204ENST00000396464 TEX15Q9BXT5 2789 aa2.05□□□□□ -2.08
GABPB1-204ENST00000396464 SETXQ7Z333 2677 aaKnown RBP2.05□□□□□ -2.08
GABPB1-204ENST00000396464 AKAP6Q13023 2319 aa2.05□□□□□ -2.08
GABPB1-204ENST00000396464 LCE6AA0A183 80 aa2.05□□□□□ -2.08
GABPB1-204ENST00000396464 LINC01549A6NIU2 74 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms