RNA–Protein interactions for RNA: ENST00000394744.6

RAB11FIP4-201, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2 BASIC

Gene RAB11FIP4, Length 1,968 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-201ENST00000394744 HECTD4Q9Y4D8 3996 aa12.31□□□□□ -0.44
RAB11FIP4-201ENST00000394744 BCE1O60756 84 aa12.31□□□□□ -0.44
RAB11FIP4-201ENST00000394744 DNAH6Q9C0G6 4158 aa12.29□□□□□ -0.44
RAB11FIP4-201ENST00000394744 A0A1B0GW54 56 aa12.29□□□□□ -0.44
RAB11FIP4-201ENST00000394744 IGLV5-52A0A0A0MRZ9 124 aa12.27□□□□□ -0.44
RAB11FIP4-201ENST00000394744 COX7CP15954 63 aa12.27□□□□□ -0.44
RAB11FIP4-201ENST00000394744 SPRR4Q96PI1 79 aa12.27□□□□□ -0.44
RAB11FIP4-201ENST00000394744 A0A0G2JQZ4 141 aa12.27□□□□□ -0.45
RAB11FIP4-201ENST00000394744 UQCRQO14949 82 aa12.27□□□□□ -0.45
RAB11FIP4-201ENST00000394744 KRTAP13-1Q8IUC0 172 aa12.27□□□□□ -0.45
RAB11FIP4-201ENST00000394744 IGFL1Q6UW32 110 aa12.26□□□□□ -0.45
RAB11FIP4-201ENST00000394744 SPRR1BP22528 89 aa12.25□□□□□ -0.45
RAB11FIP4-201ENST00000394744 IGLV8-61A0A075B6I0 122 aa12.25□□□□□ -0.45
RAB11FIP4-201ENST00000394744 SACSQ9NZJ4 4579 aa12.24□□□□□ -0.45
RAB11FIP4-201ENST00000394744 SERP2Q8N6R1 65 aa12.23□□□□□ -0.45
RAB11FIP4-201ENST00000394744 BPY2O14599 106 aa12.22□□□□□ -0.45
RAB11FIP4-201ENST00000394744 CRYGAP11844 174 aa12.22□□□□□ -0.45
RAB11FIP4-201ENST00000394744 Q8N9L7 120 aa12.22□□□□□ -0.45
RAB11FIP4-201ENST00000394744 PLAC8Q9NZF1 115 aa12.22□□□□□ -0.45
RAB11FIP4-201ENST00000394744 C9orf153Q5TBE3 101 aa12.21□□□□□ -0.46
RAB11FIP4-201ENST00000394744 IGKV4-1P06312 121 aa12.18□□□□□ -0.46
RAB11FIP4-201ENST00000394744 SRRM2Q9UQ35 2752 aaKnown RBP12.18□□□□□ -0.46
RAB11FIP4-201ENST00000394744 KMT2CQ8NEZ4 4911 aaKnown RBP12.17□□□□□ -0.46
RAB11FIP4-201ENST00000394744 PSORS1C2Q9UIG4 136 aa12.17□□□□□ -0.46
RAB11FIP4-201ENST00000394744 FRAS1Q86XX4 4008 aa12.15□□□□□ -0.46
RAB11FIP4-201ENST00000394744 LCE6AA0A183 80 aa12.15□□□□□ -0.46
RAB11FIP4-201ENST00000394744 DNAH8Q96JB1 4490 aa12.15□□□□□ -0.46
RAB11FIP4-201ENST00000394744 SS18L2Q9UHA2 77 aa12.14□□□□□ -0.47
RAB11FIP4-201ENST00000394744 KRTAP10-2P60368 255 aa12.12□□□□□ -0.47
RAB11FIP4-201ENST00000394744 A0A087WSZ3 146 aa12.11□□□□□ -0.47
RAB11FIP4-201ENST00000394744 DNAH11Q96DT5 4516 aa12.09□□□□□ -0.47
RAB11FIP4-201ENST00000394744 RYR2Q92736 4967 aa12.09□□□□□ -0.47
RAB11FIP4-201ENST00000394744 DNAH5Q8TE73 4624 aa12.09□□□□□ -0.47
RAB11FIP4-201ENST00000394744 TRAV7A0A075B6U4 112 aa12.08□□□□□ -0.48
RAB11FIP4-201ENST00000394744 DSCR10P59022 87 aa12.08□□□□□ -0.48
RAB11FIP4-201ENST00000394744 SMIM20Q8N5G0 67 aa12.07□□□□□ -0.48
RAB11FIP4-201ENST00000394744 CYSTM1Q9H1C7 97 aa12.07□□□□□ -0.48
RAB11FIP4-201ENST00000394744 FAT2Q9NYQ8 4349 aa12.05□□□□□ -0.48
RAB11FIP4-201ENST00000394744 ZNF861PO60384 105 aa12.05□□□□□ -0.48
RAB11FIP4-201ENST00000394744 LINC00483Q53H64 154 aa12.05□□□□□ -0.48
RAB11FIP4-201ENST00000394744 FAM30AQ9NZY2 134 aa12.05□□□□□ -0.48
RAB11FIP4-201ENST00000394744 ZNF706Q9Y5V0 76 aaPredicted RBP12.04□□□□□ -0.48
RAB11FIP4-201ENST00000394744 IGLV9-49A0A0B4J1Y8 123 aa12.03□□□□□ -0.48
RAB11FIP4-201ENST00000394744 DEFB116Q30KQ4 102 aa12.03□□□□□ -0.48
RAB11FIP4-201ENST00000394744 K7EQZ3 153 aa12.02□□□□□ -0.49
RAB11FIP4-201ENST00000394744 CIRBP-AS1Q8TBR5 109 aa12.01□□□□□ -0.49
RAB11FIP4-201ENST00000394744 C20orf197Q8N268 126 aa11.99□□□□□ -0.49
RAB11FIP4-201ENST00000394744 IGLV7-43P04211 117 aa11.98□□□□□ -0.49
RAB11FIP4-201ENST00000394744 ANAPC11Q9NYG5 84 aa11.98□□□□□ -0.49
RAB11FIP4-201ENST00000394744 KRTAP10-1P60331 282 aa11.97□□□□□ -0.49
RAB11FIP4-201ENST00000394744 PKD1P98161 4303 aa11.95□□□□□ -0.5
RAB11FIP4-201ENST00000394744 RYR3Q15413 4870 aa11.95□□□□□ -0.5
RAB11FIP4-201ENST00000394744 Q6ZSA8 131 aa11.94□□□□□ -0.5
RAB11FIP4-201ENST00000394744 OCR1Q9BZK8 76 aa11.94□□□□□ -0.5
RAB11FIP4-201ENST00000394744 RPL37AP61513 92 aaKnown RBP11.93□□□□□ -0.5
RAB11FIP4-201ENST00000394744 MOBPQ13875 183 aa11.92□□□□□ -0.5
RAB11FIP4-201ENST00000394744 LINC00472Q9H8W2 130 aa11.92□□□□□ -0.5
RAB11FIP4-201ENST00000394744 HRCT1Q6UXD1 115 aa11.89□□□□□ -0.51
RAB11FIP4-201ENST00000394744 HCG22E2RYF7 251 aa11.88□□□□□ -0.51
RAB11FIP4-201ENST00000394744 SNURFQ9Y675 71 aa11.88□□□□□ -0.51
RAB11FIP4-201ENST00000394744 KLKP1Q107X0 134 aa11.87□□□□□ -0.51
RAB11FIP4-201ENST00000394744 TMEM258P61165 79 aa11.87□□□□□ -0.51
RAB11FIP4-201ENST00000394744 A8MWP4 228 aa11.83□□□□□ -0.52
RAB11FIP4-201ENST00000394744 WFDC13Q8IUB5 93 aa11.83□□□□□ -0.52
RAB11FIP4-201ENST00000394744 PRR15Q8IV56 129 aa11.83□□□□□ -0.52
RAB11FIP4-201ENST00000394744 TMEM254Q8TBM7 123 aa11.83□□□□□ -0.52
RAB11FIP4-201ENST00000394744 LRP1BQ9NZR2 4599 aa11.82□□□□□ -0.52
RAB11FIP4-201ENST00000394744 PKHD1P08F94 4074 aa11.82□□□□□ -0.52
RAB11FIP4-201ENST00000394744 LINC00336Q6ZUF6 198 aa11.81□□□□□ -0.52
RAB11FIP4-201ENST00000394744 Q96NJ1 140 aa11.81□□□□□ -0.52
RAB11FIP4-201ENST00000394744 H7BZZ5 65 aa11.8□□□□□ -0.52
RAB11FIP4-201ENST00000394744 J3KT08 172 aa11.79□□□□□ -0.52
RAB11FIP4-201ENST00000394744 A0A1B0GVY2 172 aa11.77□□□□□ -0.53
RAB11FIP4-201ENST00000394744 KRTAP29-1A8MX34 341 aaPredicted RBP11.76□□□□□ -0.53
RAB11FIP4-201ENST00000394744 A0A0U1RQV1 116 aa11.76□□□□□ -0.53
RAB11FIP4-201ENST00000394744 CASC2Q6XLA1 102 aa11.74□□□□□ -0.53
RAB11FIP4-201ENST00000394744 NDUFB1O75438 58 aa11.72□□□□□ -0.53
RAB11FIP4-201ENST00000394744 NDUFC1O43677 76 aa11.71□□□□□ -0.53
RAB11FIP4-201ENST00000394744 SSBP3-AS1Q7Z2R9 100 aa11.7□□□□□ -0.54
RAB11FIP4-201ENST00000394744 MMP24-AS1A0A0U1RRL7 71 aa11.69□□□□□ -0.54
RAB11FIP4-201ENST00000394744 FAM236DA0A1B0GTK5 79 aa11.69□□□□□ -0.54
RAB11FIP4-201ENST00000394744 FAM236CP0DP71 79 aa11.69□□□□□ -0.54
RAB11FIP4-201ENST00000394744 A0A087X002 238 aa11.68□□□□□ -0.54
RAB11FIP4-201ENST00000394744 CD164Q04900 197 aa11.66□□□□□ -0.54
RAB11FIP4-201ENST00000394744 DYNC1H1Q14204 4646 aaKnown RBP11.66□□□□□ -0.54
RAB11FIP4-201ENST00000394744 KRTAP13-2Q52LG2 175 aa11.65□□□□□ -0.54
RAB11FIP4-201ENST00000394744 C5orf47Q569G3 176 aa11.65□□□□□ -0.54
RAB11FIP4-201ENST00000394744 VPS13BQ7Z7G8 4022 aa11.63□□□□□ -0.55
RAB11FIP4-201ENST00000394744 hDV103S1A0JD37 113 aa11.63□□□□□ -0.55
RAB11FIP4-201ENST00000394744 RPS28P62857 69 aaKnown RBP11.63□□□□□ -0.55
RAB11FIP4-201ENST00000394744 A0A1B0GVX0 72 aa11.62□□□□□ -0.55
RAB11FIP4-201ENST00000394744 CDK2AP2O75956 126 aa11.62□□□□□ -0.55
RAB11FIP4-201ENST00000394744 KRTAP1-4P0C5Y4 121 aa11.62□□□□□ -0.55
RAB11FIP4-201ENST00000394744 FAM229BQ4G0N7 80 aa11.62□□□□□ -0.55
RAB11FIP4-201ENST00000394744 IGHV6-1A0A0B4J1U7 121 aa11.61□□□□□ -0.55
RAB11FIP4-201ENST00000394744 C8orf17Q9NRJ1 99 aa11.61□□□□□ -0.55
RAB11FIP4-201ENST00000394744 ZCCHC13Q8WW36 166 aaKnown RBP11.6□□□□□ -0.55
RAB11FIP4-201ENST00000394744 SPINK6Q6UWN8 80 aa11.59□□□□□ -0.55
RAB11FIP4-201ENST00000394744 ASB16-AS1Q495Z4 193 aa11.58□□□□□ -0.56
RAB11FIP4-201ENST00000394744 OXTP01178 125 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms