RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 HCG22E2RYF7 251 aa10.64□□□□□ -0.71
SIPA1-201ENST00000394224 KRTAP24-1Q3LI83 254 aa10.63□□□□□ -0.71
SIPA1-201ENST00000394224 IGLV9-49A0A0B4J1Y8 123 aa10.62□□□□□ -0.71
SIPA1-201ENST00000394224 BCE1O60756 84 aa10.62□□□□□ -0.71
SIPA1-201ENST00000394224 PCOTHQ58A44 107 aa10.62□□□□□ -0.71
SIPA1-201ENST00000394224 TGP01266 2768 aa10.62□□□□□ -0.71
SIPA1-201ENST00000394224 A8MUN3 132 aa10.59□□□□□ -0.71
SIPA1-201ENST00000394224 NDUFS5O43920 106 aa10.59□□□□□ -0.71
SIPA1-201ENST00000394224 C1orf195Q5TG92 126 aa10.59□□□□□ -0.71
SIPA1-201ENST00000394224 KRTAP11-1Q8IUC1 163 aa10.59□□□□□ -0.71
SIPA1-201ENST00000394224 KRTAP1-5Q9BYS1 174 aa10.58□□□□□ -0.72
SIPA1-201ENST00000394224 DNAH10OSP0CZ25 163 aa10.57□□□□□ -0.72
SIPA1-201ENST00000394224 ANAPC11Q9NYG5 84 aa10.57□□□□□ -0.72
SIPA1-201ENST00000394224 MP68P56378 58 aa10.57□□□□□ -0.72
SIPA1-201ENST00000394224 WIPF1O43516 503 aa10.56□□□□□ -0.72
SIPA1-201ENST00000394224 SPTSSBQ8NFR3 76 aa10.56□□□□□ -0.72
SIPA1-201ENST00000394224 KRTAP4-16G5E9R7 235 aaPredicted RBP10.56□□□□□ -0.72
SIPA1-201ENST00000394224 ATP5EP56381 51 aaPredicted RBP10.53□□□□□ -0.72
SIPA1-201ENST00000394224 hDV103S1A0JD37 113 aa10.53□□□□□ -0.72
SIPA1-201ENST00000394224 CASC2Q6XLA1 102 aa10.53□□□□□ -0.72
SIPA1-201ENST00000394224 H0Y9P7 68 aa10.52□□□□□ -0.73
SIPA1-201ENST00000394224 H3BNG1 76 aa10.52□□□□□ -0.73
SIPA1-201ENST00000394224 TNP2Q05952 138 aa10.52□□□□□ -0.73
SIPA1-201ENST00000394224 TRAV22A0A0B4J277 110 aa10.51□□□□□ -0.73
SIPA1-201ENST00000394224 SPINK6Q6UWN8 80 aa10.48□□□□□ -0.73
SIPA1-201ENST00000394224 CHKB-CPT1BH3BT56 60 aa10.47□□□□□ -0.73
SIPA1-201ENST00000394224 SPRR1AP35321 89 aa10.46□□□□□ -0.73
SIPA1-201ENST00000394224 SPRR4Q96PI1 79 aa10.46□□□□□ -0.73
SIPA1-201ENST00000394224 PANO1I0J062 215 aa10.45□□□□□ -0.74
SIPA1-201ENST00000394224 PRR15LQ9BU68 103 aa10.45□□□□□ -0.74
SIPA1-201ENST00000394224 B9D2Q9BPU9 175 aa10.43□□□□□ -0.74
SIPA1-201ENST00000394224 IGHV6-1A0A0B4J1U7 121 aa10.43□□□□□ -0.74
SIPA1-201ENST00000394224 TLX1NBP0CAT3 122 aa10.41□□□□□ -0.74
SIPA1-201ENST00000394224 V9GYY9 64 aa10.41□□□□□ -0.74
SIPA1-201ENST00000394224 K7EIL1 84 aa10.41□□□□□ -0.74
SIPA1-201ENST00000394224 RETNLBQ9BQ08 111 aa10.41□□□□□ -0.74
SIPA1-201ENST00000394224 PRR15Q8IV56 129 aa10.39□□□□□ -0.75
SIPA1-201ENST00000394224 FBN3Q75N90 2809 aa10.39□□□□□ -0.75
SIPA1-201ENST00000394224 CNBPP62633 177 aaKnown RBP10.38□□□□□ -0.75
SIPA1-201ENST00000394224 PMAIP1Q13794 54 aa10.38□□□□□ -0.75
SIPA1-201ENST00000394224 C16orf90A8MZG2 172 aa10.38□□□□□ -0.75
SIPA1-201ENST00000394224 SPAG11AQ6PDA7 123 aa10.38□□□□□ -0.75
SIPA1-201ENST00000394224 ZCCHC13Q8WW36 166 aaKnown RBP10.35□□□□□ -0.75
SIPA1-201ENST00000394224 A6NED7 52 aa10.34□□□□□ -0.75
SIPA1-201ENST00000394224 PLA2G2DQ9UNK4 145 aa10.33□□□□□ -0.76
SIPA1-201ENST00000394224 DNAH7Q8WXX0 4024 aa10.32□□□□□ -0.76
SIPA1-201ENST00000394224 NDUFB1O75438 58 aa10.32□□□□□ -0.76
SIPA1-201ENST00000394224 DNAH9Q9NYC9 4486 aa10.31□□□□□ -0.76
SIPA1-201ENST00000394224 IGLV5-37A0A075B6J1 123 aa10.31□□□□□ -0.76
SIPA1-201ENST00000394224 MOBPQ13875 183 aa10.3□□□□□ -0.76
SIPA1-201ENST00000394224 F8WDY8 70 aa10.28□□□□□ -0.76
SIPA1-201ENST00000394224 A8MWP4 228 aa10.28□□□□□ -0.76
SIPA1-201ENST00000394224 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.28□□□□□ -0.76
SIPA1-201ENST00000394224 CDK2AP2O75956 126 aa10.28□□□□□ -0.76
SIPA1-201ENST00000394224 A0A087X002 238 aa10.26□□□□□ -0.77
SIPA1-201ENST00000394224 NOTCH2NLQ7Z3S9 236 aa10.26□□□□□ -0.77
SIPA1-201ENST00000394224 HUWE1Q7Z6Z7 4374 aaKnown RBP10.26□□□□□ -0.77
SIPA1-201ENST00000394224 SEC61GP60059 68 aa10.26□□□□□ -0.77
SIPA1-201ENST00000394224 COA5Q86WW8 74 aa10.26□□□□□ -0.77
SIPA1-201ENST00000394224 Q1T7F1 81 aa10.25□□□□□ -0.77
SIPA1-201ENST00000394224 Q5VV11 94 aa10.24□□□□□ -0.77
SIPA1-201ENST00000394224 KRTAP29-1A8MX34 341 aaPredicted RBP10.23□□□□□ -0.77
SIPA1-201ENST00000394224 LINC00472Q9H8W2 130 aa10.23□□□□□ -0.77
SIPA1-201ENST00000394224 LCE6AA0A183 80 aa10.22□□□□□ -0.77
SIPA1-201ENST00000394224 CIRBP-AS1Q8TBR5 109 aa10.22□□□□□ -0.77
SIPA1-201ENST00000394224 MDFIQ99750 246 aa10.22□□□□□ -0.77
SIPA1-201ENST00000394224 MEGF8Q7Z7M0 2845 aa10.21□□□□□ -0.77
SIPA1-201ENST00000394224 Q8N9P0 234 aaPredicted RBP10.21□□□□□ -0.77
SIPA1-201ENST00000394224 A0A1B0GW54 56 aa10.21□□□□□ -0.78
SIPA1-201ENST00000394224 FRAS1Q86XX4 4008 aa10.2□□□□□ -0.78
SIPA1-201ENST00000394224 MMP24-AS1A0A0U1RRL7 71 aa10.19□□□□□ -0.78
SIPA1-201ENST00000394224 CMYA5Q8N3K9 4069 aa10.19□□□□□ -0.78
SIPA1-201ENST00000394224 CD164Q04900 197 aa10.19□□□□□ -0.78
SIPA1-201ENST00000394224 PRR26Q8N8Z3 221 aa10.17□□□□□ -0.78
SIPA1-201ENST00000394224 CYP4F30PQ9H0H9 118 aa10.16□□□□□ -0.78
SIPA1-201ENST00000394224 C9orf163Q8N9P6 203 aa10.15□□□□□ -0.78
SIPA1-201ENST00000394224 C8orf17Q9NRJ1 99 aa10.12□□□□□ -0.79
SIPA1-201ENST00000394224 NBDYA0A0U1RRE5 68 aa10.11□□□□□ -0.79
SIPA1-201ENST00000394224 PSORS1C2Q9UIG4 136 aa10.11□□□□□ -0.79
SIPA1-201ENST00000394224 APLNQ9ULZ1 77 aa10.11□□□□□ -0.79
SIPA1-201ENST00000394224 LCA10Q71F78 164 aa10.11□□□□□ -0.79
SIPA1-201ENST00000394224 C14orf177Q52M58 125 aa10.09□□□□□ -0.79
SIPA1-201ENST00000394224 IGLV8-61A0A075B6I0 122 aa10.08□□□□□ -0.8
SIPA1-201ENST00000394224 PLECQ15149 4684 aaKnown RBP10.08□□□□□ -0.8
SIPA1-201ENST00000394224 SPINK7P58062 85 aa10.06□□□□□ -0.8
SIPA1-201ENST00000394224 LIMD2Q9BT23 127 aa10.06□□□□□ -0.8
SIPA1-201ENST00000394224 Q5W150 140 aa10.03□□□□□ -0.8
SIPA1-201ENST00000394224 DNAH1Q9P2D7 4330 aa10.02□□□□□ -0.81
SIPA1-201ENST00000394224 Q96NJ1 140 aa10.02□□□□□ -0.81
SIPA1-201ENST00000394224 HRES1P13985 223 aa10.02□□□□□ -0.81
SIPA1-201ENST00000394224 A0A1B0GVX0 72 aa10.01□□□□□ -0.81
SIPA1-201ENST00000394224 RTL8CO15255 209 aa10.01□□□□□ -0.81
SIPA1-201ENST00000394224 KMT2AQ03164 3969 aa10□□□□□ -0.81
SIPA1-201ENST00000394224 MRPL34Q9BQ48 92 aaKnown RBP10□□□□□ -0.81
SIPA1-201ENST00000394224 IGLV7-46A0A075B6I9 117 aa10□□□□□ -0.81
SIPA1-201ENST00000394224 SPANXA2-OT1Q8N9U9 137 aa9.98□□□□□ -0.81
SIPA1-201ENST00000394224 LY6G6CO95867 125 aa9.97□□□□□ -0.81
SIPA1-201ENST00000394224 LOC101927531A0A1B0GV80 90 aa9.97□□□□□ -0.81
SIPA1-201ENST00000394224 SPINK1P00995 79 aa9.96□□□□□ -0.81
SIPA1-201ENST00000394224 A0A087WTM6 91 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms