RNA–Protein interactions for RNA: ENST00000394089.6

RARA-204, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RARA, Length 2,024 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-204ENST00000394089 C7orf33Q8WU49 177 aa14.74□□□□□ -0.05
RARA-204ENST00000394089 FAM168BA1KXE4 195 aa14.73□□□□□ -0.05
RARA-204ENST00000394089 ZCCHC13Q8WW36 166 aaKnown RBP14.73□□□□□ -0.05
RARA-204ENST00000394089 KRTAP7-1Q8IUC3 87 aa14.72□□□□□ -0.05
RARA-204ENST00000394089 C9orf163Q8N9P6 203 aa14.71□□□□□ -0.05
RARA-204ENST00000394089 KCNQ1DNQ9H478 68 aa14.71□□□□□ -0.05
RARA-204ENST00000394089 A0A096LNI7 61 aa14.7□□□□□ -0.06
RARA-204ENST00000394089 IGLV5-48A0A075B6I7 105 aa14.7□□□□□ -0.06
RARA-204ENST00000394089 LY6G6CO95867 125 aa14.7□□□□□ -0.06
RARA-204ENST00000394089 LINC00476Q8WZB0 136 aa14.69□□□□□ -0.06
RARA-204ENST00000394089 C3orf84H3BNL1 204 aa14.68□□□□□ -0.06
RARA-204ENST00000394089 A0A087WTM6 91 aa14.68□□□□□ -0.06
RARA-204ENST00000394089 DNAH6Q9C0G6 4158 aa14.66□□□□□ -0.06
RARA-204ENST00000394089 IGLV1-50A0A075B6I6 118 aa14.65□□□□□ -0.06
RARA-204ENST00000394089 MRPL55Q7Z7F7 128 aaKnown RBP14.65□□□□□ -0.06
RARA-204ENST00000394089 CYP4F30PQ9H0H9 118 aa14.65□□□□□ -0.06
RARA-204ENST00000394089 C1orf134Q5TEV5 83 aa14.65□□□□□ -0.06
RARA-204ENST00000394089 SMIM29Q86T20 159 aa14.65□□□□□ -0.06
RARA-204ENST00000394089 IGKV2-24A0A0C4DH68 120 aa14.64□□□□□ -0.07
RARA-204ENST00000394089 C1orf64Q8NEQ6 169 aa14.63□□□□□ -0.07
RARA-204ENST00000394089 ALMS1Q8TCU4 4167 aa14.62□□□□□ -0.07
RARA-204ENST00000394089 KMT2AQ03164 3969 aa14.61□□□□□ -0.07
RARA-204ENST00000394089 RPL37AP8A6NKH3 93 aa14.61□□□□□ -0.07
RARA-204ENST00000394089 DNAH2Q9P225 4427 aa14.6□□□□□ -0.07
RARA-204ENST00000394089 TGP01266 2768 aa14.6□□□□□ -0.07
RARA-204ENST00000394089 A0A1W2PNN7 141 aa14.59□□□□□ -0.07
RARA-204ENST00000394089 FAM30AQ9NZY2 134 aa14.59□□□□□ -0.07
RARA-204ENST00000394089 SPRR1AP35321 89 aa14.58□□□□□ -0.08
RARA-204ENST00000394089 PMAIP1Q13794 54 aa14.58□□□□□ -0.08
RARA-204ENST00000394089 Q8N377 158 aa14.58□□□□□ -0.08
RARA-204ENST00000394089 ETDCA0A1B0GVM5 59 aa14.57□□□□□ -0.08
RARA-204ENST00000394089 CHTF8P0CG12 524 aa14.56□□□□□ -0.08
RARA-204ENST00000394089 KRTAP4-16G5E9R7 235 aaPredicted RBP14.56□□□□□ -0.08
RARA-204ENST00000394089 TNP2Q05952 138 aa14.55□□□□□ -0.08
RARA-204ENST00000394089 A0A1W2PNM2 257 aa14.53□□□□□ -0.08
RARA-204ENST00000394089 SPRR4Q96PI1 79 aa14.53□□□□□ -0.08
RARA-204ENST00000394089 DNAH17Q9UFH2 4485 aa14.51□□□□□ -0.09
RARA-204ENST00000394089 RTL8CO15255 209 aa14.51□□□□□ -0.09
RARA-204ENST00000394089 Q6ZRX8 168 aa14.5□□□□□ -0.09
RARA-204ENST00000394089 Q8NBF4 154 aa14.5□□□□□ -0.09
RARA-204ENST00000394089 TRAV22A0A0B4J277 110 aa14.49□□□□□ -0.09
RARA-204ENST00000394089 REG3GQ6UW15 175 aa14.49□□□□□ -0.09
RARA-204ENST00000394089 DSCR10P59022 87 aa14.49□□□□□ -0.09
RARA-204ENST00000394089 DHRS4-AS1Q9P1J3 65 aa14.48□□□□□ -0.09
RARA-204ENST00000394089 NDUFB1O75438 58 aa14.47□□□□□ -0.09
RARA-204ENST00000394089 SPACA4Q8TDM5 124 aa14.46□□□□□ -0.09
RARA-204ENST00000394089 PANO1I0J062 215 aa14.46□□□□□ -0.1
RARA-204ENST00000394089 PHF5AQ7RTV0 110 aaKnown RBP14.45□□□□□ -0.1
RARA-204ENST00000394089 C1orf137Q5JT78 98 aa14.43□□□□□ -0.1
RARA-204ENST00000394089 Q9BRP9 147 aa14.43□□□□□ -0.1
RARA-204ENST00000394089 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.43□□□□□ -0.1
RARA-204ENST00000394089 IGLV5-52A0A0A0MRZ9 124 aa14.42□□□□□ -0.1
RARA-204ENST00000394089 HECTD4Q9Y4D8 3996 aa14.41□□□□□ -0.1
RARA-204ENST00000394089 UBE2BP63146 152 aa14.4□□□□□ -0.1
RARA-204ENST00000394089 DEFB105AQ8NG35 78 aa14.4□□□□□ -0.1
RARA-204ENST00000394089 HCG22E2RYF7 251 aa14.39□□□□□ -0.11
RARA-204ENST00000394089 K7EQZ3 153 aa14.39□□□□□ -0.11
RARA-204ENST00000394089 PSPHP1O15172 72 aa14.37□□□□□ -0.11
RARA-204ENST00000394089 KRTAP11-1Q8IUC1 163 aa14.37□□□□□ -0.11
RARA-204ENST00000394089 ST20-AS1Q8NBB2 130 aa14.36□□□□□ -0.11
RARA-204ENST00000394089 FRAS1Q86XX4 4008 aa14.34□□□□□ -0.11
RARA-204ENST00000394089 SPANXA2-OT1Q8N9U9 137 aa14.34□□□□□ -0.11
RARA-204ENST00000394089 CD164Q04900 197 aa14.32□□□□□ -0.12
RARA-204ENST00000394089 Q5VV11 94 aa14.32□□□□□ -0.12
RARA-204ENST00000394089 HYDINQ4G0P3 5121 aa14.31□□□□□ -0.12
RARA-204ENST00000394089 PLAC8Q9NZF1 115 aa14.31□□□□□ -0.12
RARA-204ENST00000394089 H0Y9J4 135 aa14.31□□□□□ -0.12
RARA-204ENST00000394089 A8MUN3 132 aa14.3□□□□□ -0.12
RARA-204ENST00000394089 PRLHP81277 87 aa14.29□□□□□ -0.12
RARA-204ENST00000394089 DNAH11Q96DT5 4516 aa14.29□□□□□ -0.12
RARA-204ENST00000394089 H3BPC8 53 aa14.29□□□□□ -0.12
RARA-204ENST00000394089 KRTAP10-2P60368 255 aa14.27□□□□□ -0.12
RARA-204ENST00000394089 MP68P56378 58 aa14.27□□□□□ -0.13
RARA-204ENST00000394089 LIMD2Q9BT23 127 aa14.25□□□□□ -0.13
RARA-204ENST00000394089 UBE2AP49459 152 aa14.23□□□□□ -0.13
RARA-204ENST00000394089 SACSQ9NZJ4 4579 aa14.23□□□□□ -0.13
RARA-204ENST00000394089 Q8N9P0 234 aaPredicted RBP14.22□□□□□ -0.13
RARA-204ENST00000394089 DNAH5Q8TE73 4624 aa14.21□□□□□ -0.13
RARA-204ENST00000394089 FAT2Q9NYQ8 4349 aa14.21□□□□□ -0.13
RARA-204ENST00000394089 PRR4Q16378 134 aa14.2□□□□□ -0.14
RARA-204ENST00000394089 KRTAP29-1A8MX34 341 aaPredicted RBP14.2□□□□□ -0.14
RARA-204ENST00000394089 KRTAP13-1Q8IUC0 172 aa14.2□□□□□ -0.14
RARA-204ENST00000394089 LINC00208Q96KT6 92 aa14.17□□□□□ -0.14
RARA-204ENST00000394089 DNAH8Q96JB1 4490 aa14.16□□□□□ -0.14
RARA-204ENST00000394089 IGLV8-61A0A075B6I0 122 aa14.15□□□□□ -0.14
RARA-204ENST00000394089 KTN1-AS1Q86SY8 53 aa14.14□□□□□ -0.15
RARA-204ENST00000394089 PKD1P98161 4303 aa14.13□□□□□ -0.15
RARA-204ENST00000394089 PSORS1C2Q9UIG4 136 aa14.13□□□□□ -0.15
RARA-204ENST00000394089 Q75L30 129 aa14.12□□□□□ -0.15
RARA-204ENST00000394089 LOC101927531A0A1B0GV80 90 aa14.12□□□□□ -0.15
RARA-204ENST00000394089 Q6ZSA8 131 aa14.12□□□□□ -0.15
RARA-204ENST00000394089 A8MU10 97 aa14.11□□□□□ -0.15
RARA-204ENST00000394089 SPRR1BP22528 89 aa14.1□□□□□ -0.15
RARA-204ENST00000394089 KRTAP10-1P60331 282 aa14.1□□□□□ -0.15
RARA-204ENST00000394089 IGFL1Q6UW32 110 aa14.1□□□□□ -0.15
RARA-204ENST00000394089 CHKB-CPT1BH3BT56 60 aa14.09□□□□□ -0.15
RARA-204ENST00000394089 ATP11AUNQ6ZP68 121 aa14.09□□□□□ -0.15
RARA-204ENST00000394089 H0Y9P7 68 aa14.08□□□□□ -0.15
RARA-204ENST00000394089 WFDC13Q8IUB5 93 aa14.08□□□□□ -0.15
RARA-204ENST00000394089 CIRBP-AS1Q8TBR5 109 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms