RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 A0A087WSZ3 146 aa8.77□□□□□ -1.01
GAPVD1-205ENST00000394084 PHF5AQ7RTV0 110 aaKnown RBP8.75□□□□□ -1.01
GAPVD1-205ENST00000394084 WFDC13Q8IUB5 93 aa8.75□□□□□ -1.01
GAPVD1-205ENST00000394084 KRTAP11-1Q8IUC1 163 aa8.75□□□□□ -1.01
GAPVD1-205ENST00000394084 UBE2DNLQ8IWF7 75 aa8.75□□□□□ -1.01
GAPVD1-205ENST00000394084 MPLKIPQ8TAP9 179 aa8.75□□□□□ -1.01
GAPVD1-205ENST00000394084 SRRM2Q9UQ35 2752 aaKnown RBP8.74□□□□□ -1.01
GAPVD1-205ENST00000394084 HCG22E2RYF7 251 aa8.74□□□□□ -1.01
GAPVD1-205ENST00000394084 LINC00336Q6ZUF6 198 aa8.74□□□□□ -1.01
GAPVD1-205ENST00000394084 UBE2AP49459 152 aa8.74□□□□□ -1.01
GAPVD1-205ENST00000394084 RPL37AP61513 92 aaKnown RBP8.73□□□□□ -1.01
GAPVD1-205ENST00000394084 DNAH9Q9NYC9 4486 aa8.73□□□□□ -1.01
GAPVD1-205ENST00000394084 CSMD3Q7Z407 3707 aa8.73□□□□□ -1.01
GAPVD1-205ENST00000394084 CNBPP62633 177 aaKnown RBP8.72□□□□□ -1.01
GAPVD1-205ENST00000394084 LCE6AA0A183 80 aa8.71□□□□□ -1.02
GAPVD1-205ENST00000394084 PRR4Q16378 134 aa8.7□□□□□ -1.02
GAPVD1-205ENST00000394084 LRCOL1A6NCL2 159 aa8.69□□□□□ -1.02
GAPVD1-205ENST00000394084 TENM2Q9NT68 2774 aa8.69□□□□□ -1.02
GAPVD1-205ENST00000394084 COL7A1Q02388 2944 aa8.68□□□□□ -1.02
GAPVD1-205ENST00000394084 ZCCHC13Q8WW36 166 aaKnown RBP8.67□□□□□ -1.02
GAPVD1-205ENST00000394084 IGLV8-61A0A075B6I0 122 aa8.67□□□□□ -1.02
GAPVD1-205ENST00000394084 APLNQ9ULZ1 77 aa8.65□□□□□ -1.02
GAPVD1-205ENST00000394084 C1orf64Q8NEQ6 169 aa8.63□□□□□ -1.03
GAPVD1-205ENST00000394084 hDV103S1A0JD37 113 aa8.63□□□□□ -1.03
GAPVD1-205ENST00000394084 C14orf177Q52M58 125 aa8.63□□□□□ -1.03
GAPVD1-205ENST00000394084 PANO1I0J062 215 aa8.62□□□□□ -1.03
GAPVD1-205ENST00000394084 BRK1Q8WUW1 75 aa8.61□□□□□ -1.03
GAPVD1-205ENST00000394084 PRO0628Q9UI54 55 aa8.61□□□□□ -1.03
GAPVD1-205ENST00000394084 C9orf163Q8N9P6 203 aa8.61□□□□□ -1.03
GAPVD1-205ENST00000394084 LINC00208Q96KT6 92 aa8.61□□□□□ -1.03
GAPVD1-205ENST00000394084 MP68P56378 58 aa8.6□□□□□ -1.03
GAPVD1-205ENST00000394084 CASC2Q6XLA1 102 aa8.6□□□□□ -1.03
GAPVD1-205ENST00000394084 B9D2Q9BPU9 175 aa8.59□□□□□ -1.03
GAPVD1-205ENST00000394084 DNAH7Q8WXX0 4024 aa8.59□□□□□ -1.03
GAPVD1-205ENST00000394084 KRTAP29-1A8MX34 341 aaPredicted RBP8.59□□□□□ -1.04
GAPVD1-205ENST00000394084 SPRR1BP22528 89 aa8.59□□□□□ -1.04
GAPVD1-205ENST00000394084 PRR15Q8IV56 129 aa8.58□□□□□ -1.04
GAPVD1-205ENST00000394084 H0Y9J4 135 aa8.57□□□□□ -1.04
GAPVD1-205ENST00000394084 LINC00472Q9H8W2 130 aa8.57□□□□□ -1.04
GAPVD1-205ENST00000394084 PLECQ15149 4684 aaKnown RBP8.56□□□□□ -1.04
GAPVD1-205ENST00000394084 NBDYA0A0U1RRE5 68 aa8.55□□□□□ -1.04
GAPVD1-205ENST00000394084 A8MWP4 228 aa8.55□□□□□ -1.04
GAPVD1-205ENST00000394084 H0Y9P7 68 aa8.55□□□□□ -1.04
GAPVD1-205ENST00000394084 IGLV9-49A0A0B4J1Y8 123 aa8.55□□□□□ -1.04
GAPVD1-205ENST00000394084 TRAV22A0A0B4J277 110 aa8.55□□□□□ -1.04
GAPVD1-205ENST00000394084 MDFIQ99750 246 aa8.53□□□□□ -1.04
GAPVD1-205ENST00000394084 NDUFB1O75438 58 aa8.53□□□□□ -1.04
GAPVD1-205ENST00000394084 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.53□□□□□ -1.04
GAPVD1-205ENST00000394084 CYP4F30PQ9H0H9 118 aa8.52□□□□□ -1.05
GAPVD1-205ENST00000394084 PKIGQ9Y2B9 76 aa8.52□□□□□ -1.05
GAPVD1-205ENST00000394084 KRTAP13-1Q8IUC0 172 aa8.51□□□□□ -1.05
GAPVD1-205ENST00000394084 Q6ZRN7 208 aaPredicted RBP8.5□□□□□ -1.05
GAPVD1-205ENST00000394084 PSPHP1O15172 72 aa8.49□□□□□ -1.05
GAPVD1-205ENST00000394084 MMP24-AS1A0A0U1RRL7 71 aa8.48□□□□□ -1.05
GAPVD1-205ENST00000394084 DYNC2H1Q8NCM8 4307 aaKnown RBP8.47□□□□□ -1.05
GAPVD1-205ENST00000394084 Q1T7F1 81 aa8.46□□□□□ -1.05
GAPVD1-205ENST00000394084 SPACA4Q8TDM5 124 aa8.46□□□□□ -1.05
GAPVD1-205ENST00000394084 DNHD1Q96M86 4753 aa8.45□□□□□ -1.06
GAPVD1-205ENST00000394084 ANAPC11Q9NYG5 84 aa8.45□□□□□ -1.06
GAPVD1-205ENST00000394084 NUPR2A6NF83 97 aa8.43□□□□□ -1.06
GAPVD1-205ENST00000394084 Q96NJ1 140 aa8.43□□□□□ -1.06
GAPVD1-205ENST00000394084 H3BPC8 53 aa8.42□□□□□ -1.06
GAPVD1-205ENST00000394084 MOBPQ13875 183 aa8.42□□□□□ -1.06
GAPVD1-205ENST00000394084 A0A087WTM6 91 aa8.41□□□□□ -1.06
GAPVD1-205ENST00000394084 STARD9Q9P2P6 4700 aa8.4□□□□□ -1.06
GAPVD1-205ENST00000394084 IGHV6-1A0A0B4J1U7 121 aa8.4□□□□□ -1.06
GAPVD1-205ENST00000394084 A8MUN3 132 aa8.4□□□□□ -1.06
GAPVD1-205ENST00000394084 PCOTHQ58A44 107 aa8.4□□□□□ -1.06
GAPVD1-205ENST00000394084 PSORS1C2Q9UIG4 136 aa8.4□□□□□ -1.06
GAPVD1-205ENST00000394084 SPANXA2-OT1Q8N9U9 137 aa8.4□□□□□ -1.07
GAPVD1-205ENST00000394084 NDUFS5O43920 106 aa8.39□□□□□ -1.07
GAPVD1-205ENST00000394084 RTL8CO15255 209 aa8.38□□□□□ -1.07
GAPVD1-205ENST00000394084 C8orf17Q9NRJ1 99 aa8.38□□□□□ -1.07
GAPVD1-205ENST00000394084 LINC00483Q53H64 154 aa8.37□□□□□ -1.07
GAPVD1-205ENST00000394084 WWC2-AS2Q96NR7 200 aa8.37□□□□□ -1.07
GAPVD1-205ENST00000394084 VPS13DQ5THJ4 4388 aa8.35□□□□□ -1.07
GAPVD1-205ENST00000394084 IGLV5-52A0A0A0MRZ9 124 aa8.35□□□□□ -1.07
GAPVD1-205ENST00000394084 ZNF706Q9Y5V0 76 aaPredicted RBP8.34□□□□□ -1.07
GAPVD1-205ENST00000394084 DNAH8Q96JB1 4490 aa8.34□□□□□ -1.07
GAPVD1-205ENST00000394084 CDK2AP2O75956 126 aa8.34□□□□□ -1.07
GAPVD1-205ENST00000394084 FRAS1Q86XX4 4008 aa8.34□□□□□ -1.07
GAPVD1-205ENST00000394084 A0A087X002 238 aa8.33□□□□□ -1.08
GAPVD1-205ENST00000394084 A0A1B0GVX0 72 aa8.33□□□□□ -1.08
GAPVD1-205ENST00000394084 NOTCH2NLQ7Z3S9 236 aa8.33□□□□□ -1.08
GAPVD1-205ENST00000394084 C1orf195Q5TG92 126 aa8.33□□□□□ -1.08
GAPVD1-205ENST00000394084 CD164Q04900 197 aa8.32□□□□□ -1.08
GAPVD1-205ENST00000394084 ASB16-AS1Q495Z4 193 aa8.32□□□□□ -1.08
GAPVD1-205ENST00000394084 ZNF861PO60384 105 aa8.32□□□□□ -1.08
GAPVD1-205ENST00000394084 SPINK6Q6UWN8 80 aa8.32□□□□□ -1.08
GAPVD1-205ENST00000394084 COA5Q86WW8 74 aa8.32□□□□□ -1.08
GAPVD1-205ENST00000394084 Q8N9P0 234 aaPredicted RBP8.32□□□□□ -1.08
GAPVD1-205ENST00000394084 V9GYY9 64 aa8.32□□□□□ -1.08
GAPVD1-205ENST00000394084 TP53AIP1Q9HCN2 124 aa8.31□□□□□ -1.08
GAPVD1-205ENST00000394084 IGLV7-46A0A075B6I9 117 aa8.3□□□□□ -1.08
GAPVD1-205ENST00000394084 HECTD4Q9Y4D8 3996 aa8.3□□□□□ -1.08
GAPVD1-205ENST00000394084 Q5VV11 94 aa8.3□□□□□ -1.08
GAPVD1-205ENST00000394084 KMT2AQ03164 3969 aa8.29□□□□□ -1.08
GAPVD1-205ENST00000394084 A8MU10 97 aa8.29□□□□□ -1.08
GAPVD1-205ENST00000394084 PRR15LQ9BU68 103 aa8.29□□□□□ -1.08
GAPVD1-205ENST00000394084 PLAC8Q9NZF1 115 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms