RNA–Protein interactions for RNA: ENST00000393577.7

HMGA2-202, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3 BASIC

Gene HMGA2, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-202ENST00000393577 A0A0B4J2C4 111 aa12.78□□□□□ -0.36
HMGA2-202ENST00000393577 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.78□□□□□ -0.36
HMGA2-202ENST00000393577 Q5XG85 94 aa12.77□□□□□ -0.37
HMGA2-202ENST00000393577 XP32Q5T750 250 aa12.76□□□□□ -0.37
HMGA2-202ENST00000393577 CEND1Q8N111 149 aa12.76□□□□□ -0.37
HMGA2-202ENST00000393577 SEC61BP60468 96 aaKnown RBP12.75□□□□□ -0.37
HMGA2-202ENST00000393577 PYY3Q5JQD4 70 aa12.75□□□□□ -0.37
HMGA2-202ENST00000393577 TMA7Q9Y2S6 64 aaKnown RBP12.74□□□□□ -0.37
HMGA2-202ENST00000393577 FAT4Q6V0I7 4981 aa12.73□□□□□ -0.37
HMGA2-202ENST00000393577 C9orf92A6NGG3 77 aa12.71□□□□□ -0.37
HMGA2-202ENST00000393577 C1orf195Q5TG92 126 aa12.71□□□□□ -0.37
HMGA2-202ENST00000393577 IGLV8-61A0A075B6I0 122 aa12.7□□□□□ -0.38
HMGA2-202ENST00000393577 TMEM238LA0A1B0GVL6 79 aa12.7□□□□□ -0.38
HMGA2-202ENST00000393577 A6NJY4 79 aa12.7□□□□□ -0.38
HMGA2-202ENST00000393577 FXYD2P54710 66 aa12.7□□□□□ -0.38
HMGA2-202ENST00000393577 Q6JHZ5 121 aa12.7□□□□□ -0.38
HMGA2-202ENST00000393577 PPDPFLQ8WWR9 84 aa12.7□□□□□ -0.38
HMGA2-202ENST00000393577 H0YGX0 51 aa12.68□□□□□ -0.38
HMGA2-202ENST00000393577 OCIAD2Q56VL3 154 aa12.68□□□□□ -0.38
HMGA2-202ENST00000393577 IGFL1Q6UW32 110 aa12.68□□□□□ -0.38
HMGA2-202ENST00000393577 CLEC2BQ92478 149 aa12.68□□□□□ -0.38
HMGA2-202ENST00000393577 SNHG12Q9BXW3 62 aa12.68□□□□□ -0.38
HMGA2-202ENST00000393577 TCL1BO95988 128 aa12.67□□□□□ -0.38
HMGA2-202ENST00000393577 FAM218AQ96MZ4 157 aa12.67□□□□□ -0.38
HMGA2-202ENST00000393577 PRO1854Q9UHT4 67 aa12.67□□□□□ -0.38
HMGA2-202ENST00000393577 KRTAP4-1Q9BYQ7 146 aa12.66□□□□□ -0.38
HMGA2-202ENST00000393577 SNCGO76070 127 aa12.65□□□□□ -0.38
HMGA2-202ENST00000393577 TRBV7-7A0A0K0K1E9 115 aa12.62□□□□□ -0.39
HMGA2-202ENST00000393577 H3BUT2 72 aa12.62□□□□□ -0.39
HMGA2-202ENST00000393577 HSD52Q0P140 79 aa12.62□□□□□ -0.39
HMGA2-202ENST00000393577 LCE2AQ5TA79 106 aaPredicted RBP12.6□□□□□ -0.39
HMGA2-202ENST00000393577 TRIAP1O43715 76 aa12.58□□□□□ -0.4
HMGA2-202ENST00000393577 A0A1B0GX51 115 aa12.56□□□□□ -0.4
HMGA2-202ENST00000393577 K7ERJ3 54 aa12.55□□□□□ -0.4
HMGA2-202ENST00000393577 UQCR10Q9UDW1 63 aa12.55□□□□□ -0.4
HMGA2-202ENST00000393577 NDUFV3P56181 108 aaKnown RBP12.54□□□□□ -0.4
HMGA2-202ENST00000393577 PCOTHQ58A44 107 aa12.54□□□□□ -0.4
HMGA2-202ENST00000393577 GHRHP01286 108 aa12.5□□□□□ -0.41
HMGA2-202ENST00000393577 FABP2P12104 132 aa12.5□□□□□ -0.41
HMGA2-202ENST00000393577 PSMB2P49721 201 aa12.5□□□□□ -0.41
HMGA2-202ENST00000393577 H3BMG7 143 aa12.46□□□□□ -0.41
HMGA2-202ENST00000393577 Q6Q795 121 aa12.46□□□□□ -0.41
HMGA2-202ENST00000393577 LST1O00453 97 aa12.45□□□□□ -0.42
HMGA2-202ENST00000393577 DNAL4O96015 105 aa12.45□□□□□ -0.42
HMGA2-202ENST00000393577 RPL37P61927 97 aaKnown RBP12.44□□□□□ -0.42
HMGA2-202ENST00000393577 TEN1Q86WV5 123 aa12.44□□□□□ -0.42
HMGA2-202ENST00000393577 COX6CP09669 75 aa12.43□□□□□ -0.42
HMGA2-202ENST00000393577 ORMDL1Q9P0S3 153 aa12.42□□□□□ -0.42
HMGA2-202ENST00000393577 SS18L2Q9UHA2 77 aa12.42□□□□□ -0.42
HMGA2-202ENST00000393577 A0A087WSZ3 146 aa12.39□□□□□ -0.43
HMGA2-202ENST00000393577 A0A1B0GV72 72 aa12.36□□□□□ -0.43
HMGA2-202ENST00000393577 H3BQ85 93 aa12.36□□□□□ -0.43
HMGA2-202ENST00000393577 OBSCN-AS1Q96MR7 158 aa12.35□□□□□ -0.43
HMGA2-202ENST00000393577 A0A1W2PNM2 257 aa12.34□□□□□ -0.43
HMGA2-202ENST00000393577 TMEM256-PLSCR3K7ERE1 68 aa12.33□□□□□ -0.44
HMGA2-202ENST00000393577 ANKRD29Q8N6D5 301 aa12.32□□□□□ -0.44
HMGA2-202ENST00000393577 SCGB1C2P0DMR2 95 aa12.31□□□□□ -0.44
HMGA2-202ENST00000393577 TRACP01848 142 aa12.29□□□□□ -0.44
HMGA2-202ENST00000393577 KRTAP19-2Q3LHN2 52 aa12.29□□□□□ -0.44
HMGA2-202ENST00000393577 LCE2CQ5TA81 110 aa12.29□□□□□ -0.44
HMGA2-202ENST00000393577 Q96NJ1 140 aa12.29□□□□□ -0.44
HMGA2-202ENST00000393577 UBE2V1Q13404 147 aa12.26□□□□□ -0.45
HMGA2-202ENST00000393577 TRBV7-4A0A0J9YYF1 115 aa12.25□□□□□ -0.45
HMGA2-202ENST00000393577 Q75L30 129 aa12.25□□□□□ -0.45
HMGA2-202ENST00000393577 SMIM6P0DI80 62 aa12.24□□□□□ -0.45
HMGA2-202ENST00000393577 M0R143 59 aa12.23□□□□□ -0.45
HMGA2-202ENST00000393577 KRTAP9-2Q9BYQ4 174 aa12.22□□□□□ -0.45
HMGA2-202ENST00000393577 CCKP06307 115 aa12.21□□□□□ -0.45
HMGA2-202ENST00000393577 SIGMAR1Q99720 223 aa12.21□□□□□ -0.45
HMGA2-202ENST00000393577 ATP11AUNQ6ZP68 121 aa12.2□□□□□ -0.46
HMGA2-202ENST00000393577 NAA38Q9BRA0 125 aaKnown RBP12.17□□□□□ -0.46
HMGA2-202ENST00000393577 DSCR10P59022 87 aa12.16□□□□□ -0.46
HMGA2-202ENST00000393577 IGKV4-1P06312 121 aa12.15□□□□□ -0.46
HMGA2-202ENST00000393577 MT1HP80294 61 aa12.15□□□□□ -0.46
HMGA2-202ENST00000393577 RBM3P98179 157 aaKnown RBP12.15□□□□□ -0.46
HMGA2-202ENST00000393577 BAALC-AS2P0C853 105 aa12.14□□□□□ -0.47
HMGA2-202ENST00000393577 C20orf166-AS1Q96NR2 134 aa12.14□□□□□ -0.47
HMGA2-202ENST00000393577 VPS25Q9BRG1 176 aa12.14□□□□□ -0.47
HMGA2-202ENST00000393577 DSCR8Q96T75 97 aa12.12□□□□□ -0.47
HMGA2-202ENST00000393577 A8MUU9 505 aa12.11□□□□□ -0.47
HMGA2-202ENST00000393577 ATXN8Q156A1 80 aa12.11□□□□□ -0.47
HMGA2-202ENST00000393577 DEFB116Q30KQ4 102 aa12.11□□□□□ -0.47
HMGA2-202ENST00000393577 LINC00472Q9H8W2 130 aa12.1□□□□□ -0.47
HMGA2-202ENST00000393577 COX6B2Q6YFQ2 88 aa12.09□□□□□ -0.47
HMGA2-202ENST00000393577 TSTD3H0UI37 97 aa12.08□□□□□ -0.48
HMGA2-202ENST00000393577 LINC00313P59037 77 aa12.07□□□□□ -0.48
HMGA2-202ENST00000393577 C9JAW5 83 aa12.05□□□□□ -0.48
HMGA2-202ENST00000393577 BATFQ16520 125 aa12.04□□□□□ -0.48
HMGA2-202ENST00000393577 NOTCH2NLQ7Z3S9 236 aa12.02□□□□□ -0.49
HMGA2-202ENST00000393577 LOC105371267A0A1B0GV96 52 aa12.01□□□□□ -0.49
HMGA2-202ENST00000393577 KRTAP16-1A8MUX0 517 aa12.01□□□□□ -0.49
HMGA2-202ENST00000393577 IGHV6-1A0A0B4J1U7 121 aa12□□□□□ -0.49
HMGA2-202ENST00000393577 LYRM7Q5U5X0 104 aa12□□□□□ -0.49
HMGA2-202ENST00000393577 JMJD7-PLA2G4BH0Y9G9 81 aa11.98□□□□□ -0.49
HMGA2-202ENST00000393577 C21orf62-AS1Q17RA5 79 aa11.96□□□□□ -0.49
HMGA2-202ENST00000393577 FLGP20930 4061 aaPredicted RBP11.95□□□□□ -0.5
HMGA2-202ENST00000393577 Q6ZQT0 140 aa11.95□□□□□ -0.5
HMGA2-202ENST00000393577 M0R2T5 61 aa11.94□□□□□ -0.5
HMGA2-202ENST00000393577 TRBV20-1A0A075B6N2 111 aa11.93□□□□□ -0.5
HMGA2-202ENST00000393577 A0A1B0GVX0 72 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms