RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 SCXQ7RTU7 201 aa5.64□□□□□ -1.51
TDP1-202ENST00000393452 IGLV8-61A0A075B6I0 122 aa5.63□□□□□ -1.51
TDP1-202ENST00000393452 HIGD2AQ9BW72 106 aa5.63□□□□□ -1.51
TDP1-202ENST00000393452 SPACA4Q8TDM5 124 aa5.62□□□□□ -1.51
TDP1-202ENST00000393452 LINC00476Q8WZB0 136 aa5.62□□□□□ -1.51
TDP1-202ENST00000393452 SPRR1BP22528 89 aa5.62□□□□□ -1.51
TDP1-202ENST00000393452 F8WEM9 126 aa5.61□□□□□ -1.51
TDP1-202ENST00000393452 BPY2O14599 106 aa5.61□□□□□ -1.51
TDP1-202ENST00000393452 IGKV4-1P06312 121 aa5.61□□□□□ -1.51
TDP1-202ENST00000393452 DPH3Q96FX2 82 aa5.61□□□□□ -1.51
TDP1-202ENST00000393452 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.61□□□□□ -1.51
TDP1-202ENST00000393452 KRTAP13-1Q8IUC0 172 aa5.6□□□□□ -1.51
TDP1-202ENST00000393452 TMEM258P61165 79 aa5.6□□□□□ -1.51
TDP1-202ENST00000393452 IGFL1Q6UW32 110 aa5.6□□□□□ -1.51
TDP1-202ENST00000393452 TRAV7A0A075B6U4 112 aa5.59□□□□□ -1.51
TDP1-202ENST00000393452 OXTP01178 125 aa5.59□□□□□ -1.51
TDP1-202ENST00000393452 Q8N9L7 120 aa5.59□□□□□ -1.51
TDP1-202ENST00000393452 UBE2AP49459 152 aa5.58□□□□□ -1.52
TDP1-202ENST00000393452 KMT2AQ03164 3969 aa5.58□□□□□ -1.52
TDP1-202ENST00000393452 RTL8CO15255 209 aa5.58□□□□□ -1.52
TDP1-202ENST00000393452 A0A0G2JQZ4 141 aa5.57□□□□□ -1.52
TDP1-202ENST00000393452 C1orf134Q5TEV5 83 aa5.56□□□□□ -1.52
TDP1-202ENST00000393452 DSCR10P59022 87 aa5.55□□□□□ -1.52
TDP1-202ENST00000393452 PLAC8Q9NZF1 115 aa5.55□□□□□ -1.52
TDP1-202ENST00000393452 V9GYY9 64 aa5.55□□□□□ -1.52
TDP1-202ENST00000393452 C20orf197Q8N268 126 aa5.54□□□□□ -1.52
TDP1-202ENST00000393452 HECTD4Q9Y4D8 3996 aa5.54□□□□□ -1.52
TDP1-202ENST00000393452 SRRM2Q9UQ35 2752 aaKnown RBP5.54□□□□□ -1.52
TDP1-202ENST00000393452 C4orf26Q17RF5 130 aa5.53□□□□□ -1.52
TDP1-202ENST00000393452 Q5XG85 94 aa5.53□□□□□ -1.52
TDP1-202ENST00000393452 A0A087WSZ3 146 aa5.53□□□□□ -1.52
TDP1-202ENST00000393452 KLKP1Q107X0 134 aa5.53□□□□□ -1.52
TDP1-202ENST00000393452 OCR1Q9BZK8 76 aa5.52□□□□□ -1.53
TDP1-202ENST00000393452 IGLV5-52A0A0A0MRZ9 124 aa5.52□□□□□ -1.53
TDP1-202ENST00000393452 LY6G6CO95867 125 aa5.52□□□□□ -1.53
TDP1-202ENST00000393452 K7EQZ3 153 aa5.51□□□□□ -1.53
TDP1-202ENST00000393452 DNAH6Q9C0G6 4158 aa5.51□□□□□ -1.53
TDP1-202ENST00000393452 LINC00483Q53H64 154 aa5.51□□□□□ -1.53
TDP1-202ENST00000393452 HRCT1Q6UXD1 115 aa5.51□□□□□ -1.53
TDP1-202ENST00000393452 PSORS1C2Q9UIG4 136 aa5.51□□□□□ -1.53
TDP1-202ENST00000393452 DNAH17Q9UFH2 4485 aa5.5□□□□□ -1.53
TDP1-202ENST00000393452 H7BZZ5 65 aa5.49□□□□□ -1.53
TDP1-202ENST00000393452 WWC2-AS2Q96NR7 200 aa5.49□□□□□ -1.53
TDP1-202ENST00000393452 DNAH2Q9P225 4427 aa5.49□□□□□ -1.53
TDP1-202ENST00000393452 ZNF861PO60384 105 aa5.48□□□□□ -1.53
TDP1-202ENST00000393452 RPL37AP61513 92 aaKnown RBP5.48□□□□□ -1.53
TDP1-202ENST00000393452 ZNF706Q9Y5V0 76 aaPredicted RBP5.48□□□□□ -1.53
TDP1-202ENST00000393452 TMEM254Q8TBM7 123 aa5.47□□□□□ -1.53
TDP1-202ENST00000393452 LINC00472Q9H8W2 130 aa5.47□□□□□ -1.53
TDP1-202ENST00000393452 SNURFQ9Y675 71 aa5.47□□□□□ -1.53
TDP1-202ENST00000393452 FAM236DA0A1B0GTK5 79 aa5.47□□□□□ -1.53
TDP1-202ENST00000393452 FAM236CP0DP71 79 aa5.47□□□□□ -1.53
TDP1-202ENST00000393452 DEFB116Q30KQ4 102 aa5.47□□□□□ -1.53
TDP1-202ENST00000393452 PRO0628Q9UI54 55 aa5.47□□□□□ -1.53
TDP1-202ENST00000393452 HCG22E2RYF7 251 aa5.46□□□□□ -1.54
TDP1-202ENST00000393452 LCE6AA0A183 80 aa5.45□□□□□ -1.54
TDP1-202ENST00000393452 NDUFC1O43677 76 aa5.45□□□□□ -1.54
TDP1-202ENST00000393452 IGLV9-49A0A0B4J1Y8 123 aa5.44□□□□□ -1.54
TDP1-202ENST00000393452 A0A0U1RQV1 116 aa5.44□□□□□ -1.54
TDP1-202ENST00000393452 KRTAP10-2P60368 255 aa5.44□□□□□ -1.54
TDP1-202ENST00000393452 A8MWP4 228 aa5.43□□□□□ -1.54
TDP1-202ENST00000393452 IGLV7-43P04211 117 aa5.43□□□□□ -1.54
TDP1-202ENST00000393452 PRR15Q8IV56 129 aa5.43□□□□□ -1.54
TDP1-202ENST00000393452 SERP1Q9Y6X1 66 aa5.43□□□□□ -1.54
TDP1-202ENST00000393452 KRTAP29-1A8MX34 341 aaPredicted RBP5.43□□□□□ -1.54
TDP1-202ENST00000393452 FAM30AQ9NZY2 134 aa5.43□□□□□ -1.54
TDP1-202ENST00000393452 ALMS1Q8TCU4 4167 aa5.43□□□□□ -1.54
TDP1-202ENST00000393452 LINC00336Q6ZUF6 198 aa5.42□□□□□ -1.54
TDP1-202ENST00000393452 FRAS1Q86XX4 4008 aa5.42□□□□□ -1.54
TDP1-202ENST00000393452 Q6ZSA8 131 aa5.42□□□□□ -1.54
TDP1-202ENST00000393452 CIRBP-AS1Q8TBR5 109 aa5.42□□□□□ -1.54
TDP1-202ENST00000393452 DNAH8Q96JB1 4490 aa5.41□□□□□ -1.54
TDP1-202ENST00000393452 Q96NJ1 140 aa5.41□□□□□ -1.54
TDP1-202ENST00000393452 MOBPQ13875 183 aa5.41□□□□□ -1.54
TDP1-202ENST00000393452 ANAPC11Q9NYG5 84 aa5.41□□□□□ -1.54
TDP1-202ENST00000393452 WFDC13Q8IUB5 93 aa5.4□□□□□ -1.55
TDP1-202ENST00000393452 FP248Q71RG6 208 aaPredicted RBP5.39□□□□□ -1.55
TDP1-202ENST00000393452 C1orf195Q5TG92 126 aa5.38□□□□□ -1.55
TDP1-202ENST00000393452 ZCCHC13Q8WW36 166 aaKnown RBP5.38□□□□□ -1.55
TDP1-202ENST00000393452 HYDINQ4G0P3 5121 aa5.38□□□□□ -1.55
TDP1-202ENST00000393452 KRTAP10-1P60331 282 aa5.38□□□□□ -1.55
TDP1-202ENST00000393452 CASC2Q6XLA1 102 aa5.38□□□□□ -1.55
TDP1-202ENST00000393452 ATP5EP56381 51 aaPredicted RBP5.37□□□□□ -1.55
TDP1-202ENST00000393452 SMIM26A0A096LP01 95 aa5.37□□□□□ -1.55
TDP1-202ENST00000393452 DNAH11Q96DT5 4516 aa5.37□□□□□ -1.55
TDP1-202ENST00000393452 DNAH5Q8TE73 4624 aa5.36□□□□□ -1.55
TDP1-202ENST00000393452 MMP24-AS1A0A0U1RRL7 71 aa5.36□□□□□ -1.55
TDP1-202ENST00000393452 NDUFB1O75438 58 aa5.36□□□□□ -1.55
TDP1-202ENST00000393452 ASB16-AS1Q495Z4 193 aa5.35□□□□□ -1.55
TDP1-202ENST00000393452 KMT2CQ8NEZ4 4911 aaKnown RBP5.35□□□□□ -1.55
TDP1-202ENST00000393452 FAT2Q9NYQ8 4349 aa5.34□□□□□ -1.55
TDP1-202ENST00000393452 CD164Q04900 197 aa5.34□□□□□ -1.56
TDP1-202ENST00000393452 PKD1P98161 4303 aa5.33□□□□□ -1.56
TDP1-202ENST00000393452 SSBP3-AS1Q7Z2R9 100 aa5.33□□□□□ -1.56
TDP1-202ENST00000393452 hDV103S1A0JD37 113 aa5.33□□□□□ -1.56
TDP1-202ENST00000393452 A0A1B0GVX0 72 aa5.31□□□□□ -1.56
TDP1-202ENST00000393452 MP68P56378 58 aa5.31□□□□□ -1.56
TDP1-202ENST00000393452 C8orf17Q9NRJ1 99 aa5.31□□□□□ -1.56
TDP1-202ENST00000393452 SACSQ9NZJ4 4579 aa5.31□□□□□ -1.56
TDP1-202ENST00000393452 H3BPC8 53 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms