RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 ADM2Q7Z4H4 148 aa5□□□□□ -1.61
VTI1A-201ENST00000393077 IGLV7-46A0A075B6I9 117 aa4.99□□□□□ -1.61
VTI1A-201ENST00000393077 TP53AIP1Q9HCN2 124 aa4.99□□□□□ -1.61
VTI1A-201ENST00000393077 SMG1Q96Q15 3661 aaKnown RBP4.99□□□□□ -1.61
VTI1A-201ENST00000393077 ACYP2P14621 99 aa4.99□□□□□ -1.61
VTI1A-201ENST00000393077 Q8NDZ9 215 aa4.99□□□□□ -1.61
VTI1A-201ENST00000393077 NBEAL1Q6ZS30 2694 aa4.98□□□□□ -1.61
VTI1A-201ENST00000393077 IGLV5-48A0A075B6I7 105 aa4.98□□□□□ -1.61
VTI1A-201ENST00000393077 K7ERS5 55 aa4.98□□□□□ -1.61
VTI1A-201ENST00000393077 LCE6AA0A183 80 aa4.98□□□□□ -1.61
VTI1A-201ENST00000393077 BAHCC1Q9P281 2608 aa4.97□□□□□ -1.61
VTI1A-201ENST00000393077 A8MWP4 228 aa4.97□□□□□ -1.61
VTI1A-201ENST00000393077 PLA2G1BP04054 148 aaKnown RBP4.97□□□□□ -1.61
VTI1A-201ENST00000393077 LELP1Q5T871 98 aa4.97□□□□□ -1.61
VTI1A-201ENST00000393077 REG3GQ6UW15 175 aa4.97□□□□□ -1.61
VTI1A-201ENST00000393077 Q6ZRX8 168 aa4.96□□□□□ -1.62
VTI1A-201ENST00000393077 GVQW2A0A096LPI5 108 aaPredicted RBP4.95□□□□□ -1.62
VTI1A-201ENST00000393077 KRTAP1-1Q07627 177 aa4.95□□□□□ -1.62
VTI1A-201ENST00000393077 FBN2P35556 2912 aa4.95□□□□□ -1.62
VTI1A-201ENST00000393077 IGLV8-61A0A075B6I0 122 aa4.95□□□□□ -1.62
VTI1A-201ENST00000393077 IGHV6-1A0A0B4J1U7 121 aa4.94□□□□□ -1.62
VTI1A-201ENST00000393077 ASB16-AS1Q495Z4 193 aa4.94□□□□□ -1.62
VTI1A-201ENST00000393077 DEFB131BA0A096LNP1 70 aa4.94□□□□□ -1.62
VTI1A-201ENST00000393077 A0A0G2JQZ4 141 aa4.93□□□□□ -1.62
VTI1A-201ENST00000393077 A0A1W2PNN7 141 aa4.93□□□□□ -1.62
VTI1A-201ENST00000393077 HIVEP1P15822 2718 aa4.93□□□□□ -1.62
VTI1A-201ENST00000393077 SPINT4Q6UDR6 99 aa4.93□□□□□ -1.62
VTI1A-201ENST00000393077 SPRR4Q96PI1 79 aa4.92□□□□□ -1.62
VTI1A-201ENST00000393077 KRTAP24-1Q3LI83 254 aa4.91□□□□□ -1.62
VTI1A-201ENST00000393077 NIPBLQ6KC79 2804 aaeCLIP4.91□□□□□ -1.62
VTI1A-201ENST00000393077 IGKV2-24A0A0C4DH68 120 aa4.91□□□□□ -1.62
VTI1A-201ENST00000393077 IGFL1Q6UW32 110 aa4.91□□□□□ -1.62
VTI1A-201ENST00000393077 BSNQ9UPA5 3926 aa4.9□□□□□ -1.62
VTI1A-201ENST00000393077 MXRA5Q9NR99 2828 aa4.9□□□□□ -1.62
VTI1A-201ENST00000393077 C9orf163Q8N9P6 203 aa4.9□□□□□ -1.62
VTI1A-201ENST00000393077 HRES1P13985 223 aa4.9□□□□□ -1.63
VTI1A-201ENST00000393077 KRTAP10-3P60369 221 aa4.9□□□□□ -1.63
VTI1A-201ENST00000393077 NSD1Q96L73 2696 aaPredicted RBP4.89□□□□□ -1.63
VTI1A-201ENST00000393077 PRLHP81277 87 aa4.88□□□□□ -1.63
VTI1A-201ENST00000393077 CELSR1Q9NYQ6 3014 aa4.88□□□□□ -1.63
VTI1A-201ENST00000393077 A0A0A0MQY5 61 aa4.88□□□□□ -1.63
VTI1A-201ENST00000393077 SPINK6Q6UWN8 80 aa4.88□□□□□ -1.63
VTI1A-201ENST00000393077 SSBP3-AS1Q7Z2R9 100 aa4.88□□□□□ -1.63
VTI1A-201ENST00000393077 IGLV1-50A0A075B6I6 118 aa4.87□□□□□ -1.63
VTI1A-201ENST00000393077 J3QL48 77 aa4.87□□□□□ -1.63
VTI1A-201ENST00000393077 X6R8D5 127 aa4.87□□□□□ -1.63
VTI1A-201ENST00000393077 SPINK1P00995 79 aa4.87□□□□□ -1.63
VTI1A-201ENST00000393077 SVEP1Q4LDE5 3571 aa4.86□□□□□ -1.63
VTI1A-201ENST00000393077 GIG44P09565 113 aaPredicted RBP4.86□□□□□ -1.63
VTI1A-201ENST00000393077 C19orf73Q9NVV2 129 aa4.85□□□□□ -1.63
VTI1A-201ENST00000393077 CNBPP62633 177 aaKnown RBP4.85□□□□□ -1.63
VTI1A-201ENST00000393077 IGLV9-49A0A0B4J1Y8 123 aa4.85□□□□□ -1.63
VTI1A-201ENST00000393077 CSMD1Q96PZ7 3565 aa4.85□□□□□ -1.63
VTI1A-201ENST00000393077 CSNK1G2-AS1Q8NCQ2 148 aa4.83□□□□□ -1.64
VTI1A-201ENST00000393077 Q6ZR54 194 aa4.82□□□□□ -1.64
VTI1A-201ENST00000393077 MRPL34Q9BQ48 92 aaKnown RBP4.82□□□□□ -1.64
VTI1A-201ENST00000393077 ROMO1P60602 79 aa4.82□□□□□ -1.64
VTI1A-201ENST00000393077 C8orf17Q9NRJ1 99 aa4.82□□□□□ -1.64
VTI1A-201ENST00000393077 VPS13CQ709C8 3753 aa4.81□□□□□ -1.64
VTI1A-201ENST00000393077 TENM4Q6N022 2769 aa4.81□□□□□ -1.64
VTI1A-201ENST00000393077 KRTAP29-1A8MX34 341 aaPredicted RBP4.8□□□□□ -1.64
VTI1A-201ENST00000393077 SPATA8Q6RVD6 105 aa4.8□□□□□ -1.64
VTI1A-201ENST00000393077 FAM168BA1KXE4 195 aa4.8□□□□□ -1.64
VTI1A-201ENST00000393077 PRR34Q9NV39 138 aa4.8□□□□□ -1.64
VTI1A-201ENST00000393077 FLG2Q5D862 2391 aaPredicted RBP4.8□□□□□ -1.64
VTI1A-201ENST00000393077 IGLV5-37A0A075B6J1 123 aa4.79□□□□□ -1.64
VTI1A-201ENST00000393077 TNP2Q05952 138 aa4.79□□□□□ -1.64
VTI1A-201ENST00000393077 KRTAP10-11P60412 298 aa4.78□□□□□ -1.64
VTI1A-201ENST00000393077 A0A087X002 238 aa4.78□□□□□ -1.64
VTI1A-201ENST00000393077 MMP24-AS1A0A0U1RRL7 71 aa4.78□□□□□ -1.64
VTI1A-201ENST00000393077 KRTAP16-1A8MUX0 517 aa4.78□□□□□ -1.64
VTI1A-201ENST00000393077 CUBNO60494 3623 aa4.77□□□□□ -1.65
VTI1A-201ENST00000393077 RTL8CO15255 209 aa4.77□□□□□ -1.65
VTI1A-201ENST00000393077 KMT2BQ9UMN6 2715 aaPredicted RBP4.76□□□□□ -1.65
VTI1A-201ENST00000393077 C15orf56Q8N910 161 aa4.75□□□□□ -1.65
VTI1A-201ENST00000393077 IGKV2D-30A0A075B6S6 120 aa4.75□□□□□ -1.65
VTI1A-201ENST00000393077 IGKV2-30P06310 120 aa4.75□□□□□ -1.65
VTI1A-201ENST00000393077 A0A1B0GVX0 72 aa4.74□□□□□ -1.65
VTI1A-201ENST00000393077 CSMD2Q7Z408 3487 aa4.74□□□□□ -1.65
VTI1A-201ENST00000393077 NBPF19A0A087WUL8 3843 aa4.74□□□□□ -1.65
VTI1A-201ENST00000393077 KRTAP25-1Q3LHN0 102 aa4.74□□□□□ -1.65
VTI1A-201ENST00000393077 CRIPTQ9P021 101 aa4.74□□□□□ -1.65
VTI1A-201ENST00000393077 PLAC8Q9NZF1 115 aa4.73□□□□□ -1.65
VTI1A-201ENST00000393077 LINC00472Q9H8W2 130 aa4.72□□□□□ -1.65
VTI1A-201ENST00000393077 K7EIL1 84 aa4.72□□□□□ -1.65
VTI1A-201ENST00000393077 DNAH10OSP0CZ25 163 aa4.72□□□□□ -1.65
VTI1A-201ENST00000393077 OTOGQ6ZRI0 2925 aa4.71□□□□□ -1.65
VTI1A-201ENST00000393077 DMAC1Q96GE9 116 aa4.71□□□□□ -1.66
VTI1A-201ENST00000393077 PLA2G2DQ9UNK4 145 aa4.71□□□□□ -1.66
VTI1A-201ENST00000393077 LY6G6CO95867 125 aa4.71□□□□□ -1.66
VTI1A-201ENST00000393077 STAB2Q8WWQ8 2551 aa4.7□□□□□ -1.66
VTI1A-201ENST00000393077 C14orf177Q52M58 125 aa4.7□□□□□ -1.66
VTI1A-201ENST00000393077 LINC01556Q5JQF7 62 aa4.7□□□□□ -1.66
VTI1A-201ENST00000393077 FAM229AH3BQW9 127 aa4.7□□□□□ -1.66
VTI1A-201ENST00000393077 SPRR1AP35321 89 aa4.69□□□□□ -1.66
VTI1A-201ENST00000393077 TENM1Q9UKZ4 2725 aa4.69□□□□□ -1.66
VTI1A-201ENST00000393077 DMBT1Q9UGM3 2413 aaPredicted RBP4.68□□□□□ -1.66
VTI1A-201ENST00000393077 NDUFAF8A1L188 74 aa4.68□□□□□ -1.66
VTI1A-201ENST00000393077 H3BNG1 76 aa4.68□□□□□ -1.66
VTI1A-201ENST00000393077 NUPR2A6NF83 97 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms