RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 REG3GQ6UW15 175 aa8.87□□□□□ -0.99
CCDC57-203ENST00000392343 IGFL1Q6UW32 110 aa8.87□□□□□ -0.99
CCDC57-203ENST00000392343 A0A087WSZ3 146 aa8.86□□□□□ -0.99
CCDC57-203ENST00000392343 ZCCHC13Q8WW36 166 aaKnown RBP8.86□□□□□ -0.99
CCDC57-203ENST00000392343 IGLV5-37A0A075B6J1 123 aa8.85□□□□□ -0.99
CCDC57-203ENST00000392343 A0A1B0GW54 56 aa8.85□□□□□ -0.99
CCDC57-203ENST00000392343 DNAH1Q9P2D7 4330 aa8.82□□□□□ -1
CCDC57-203ENST00000392343 CMYA5Q8N3K9 4069 aa8.82□□□□□ -1
CCDC57-203ENST00000392343 C1orf195Q5TG92 126 aa8.82□□□□□ -1
CCDC57-203ENST00000392343 COL7A1Q02388 2944 aa8.81□□□□□ -1
CCDC57-203ENST00000392343 SEC61GP60059 68 aa8.81□□□□□ -1
CCDC57-203ENST00000392343 LINC00208Q96KT6 92 aa8.8□□□□□ -1
CCDC57-203ENST00000392343 A0A096LNI7 61 aa8.79□□□□□ -1
CCDC57-203ENST00000392343 TRAV22A0A0B4J277 110 aa8.77□□□□□ -1.01
CCDC57-203ENST00000392343 TENM2Q9NT68 2774 aa8.77□□□□□ -1.01
CCDC57-203ENST00000392343 UBE2AP49459 152 aa8.76□□□□□ -1.01
CCDC57-203ENST00000392343 Q1T7F1 81 aa8.76□□□□□ -1.01
CCDC57-203ENST00000392343 KRTAP11-1Q8IUC1 163 aa8.75□□□□□ -1.01
CCDC57-203ENST00000392343 MP68P56378 58 aa8.75□□□□□ -1.01
CCDC57-203ENST00000392343 CHTF8P0CG12 524 aa8.75□□□□□ -1.01
CCDC57-203ENST00000392343 A8MUN3 132 aa8.74□□□□□ -1.01
CCDC57-203ENST00000392343 A8MU10 97 aa8.73□□□□□ -1.01
CCDC57-203ENST00000392343 PHF5AQ7RTV0 110 aaKnown RBP8.73□□□□□ -1.01
CCDC57-203ENST00000392343 DNAH9Q9NYC9 4486 aa8.73□□□□□ -1.01
CCDC57-203ENST00000392343 CYP4F30PQ9H0H9 118 aa8.72□□□□□ -1.01
CCDC57-203ENST00000392343 H0Y9P7 68 aa8.71□□□□□ -1.01
CCDC57-203ENST00000392343 CASC2Q6XLA1 102 aa8.71□□□□□ -1.01
CCDC57-203ENST00000392343 KRTAP1-5Q9BYS1 174 aa8.71□□□□□ -1.01
CCDC57-203ENST00000392343 B9D2Q9BPU9 175 aa8.71□□□□□ -1.02
CCDC57-203ENST00000392343 KRTAP29-1A8MX34 341 aaPredicted RBP8.7□□□□□ -1.02
CCDC57-203ENST00000392343 CNBPP62633 177 aaKnown RBP8.7□□□□□ -1.02
CCDC57-203ENST00000392343 NDUFB1O75438 58 aa8.69□□□□□ -1.02
CCDC57-203ENST00000392343 KRTAP24-1Q3LI83 254 aa8.69□□□□□ -1.02
CCDC57-203ENST00000392343 STAB2Q8WWQ8 2551 aa8.69□□□□□ -1.02
CCDC57-203ENST00000392343 HUWE1Q7Z6Z7 4374 aaKnown RBP8.68□□□□□ -1.02
CCDC57-203ENST00000392343 V9GYY9 64 aa8.68□□□□□ -1.02
CCDC57-203ENST00000392343 C16orf90A8MZG2 172 aa8.68□□□□□ -1.02
CCDC57-203ENST00000392343 H0Y9J4 135 aa8.67□□□□□ -1.02
CCDC57-203ENST00000392343 PRR15Q8IV56 129 aa8.67□□□□□ -1.02
CCDC57-203ENST00000392343 IGLV8-61A0A075B6I0 122 aa8.66□□□□□ -1.02
CCDC57-203ENST00000392343 DNAH3Q8TD57 4116 aa8.65□□□□□ -1.02
CCDC57-203ENST00000392343 MGAM2Q2M2H8 2515 aa8.63□□□□□ -1.03
CCDC57-203ENST00000392343 LINC00472Q9H8W2 130 aa8.63□□□□□ -1.03
CCDC57-203ENST00000392343 A8MWP4 228 aa8.63□□□□□ -1.03
CCDC57-203ENST00000392343 DNAH7Q8WXX0 4024 aa8.62□□□□□ -1.03
CCDC57-203ENST00000392343 Q5VV11 94 aa8.62□□□□□ -1.03
CCDC57-203ENST00000392343 PCOTHQ58A44 107 aa8.61□□□□□ -1.03
CCDC57-203ENST00000392343 CHKB-CPT1BH3BT56 60 aa8.59□□□□□ -1.03
CCDC57-203ENST00000392343 Q8N9P0 234 aaPredicted RBP8.59□□□□□ -1.03
CCDC57-203ENST00000392343 PRR15LQ9BU68 103 aa8.59□□□□□ -1.04
CCDC57-203ENST00000392343 IGLV9-49A0A0B4J1Y8 123 aa8.58□□□□□ -1.04
CCDC57-203ENST00000392343 PMAIP1Q13794 54 aa8.58□□□□□ -1.04
CCDC57-203ENST00000392343 PANO1I0J062 215 aa8.58□□□□□ -1.04
CCDC57-203ENST00000392343 MMP24-AS1A0A0U1RRL7 71 aa8.57□□□□□ -1.04
CCDC57-203ENST00000392343 UBE2DNLQ8IWF7 75 aa8.57□□□□□ -1.04
CCDC57-203ENST00000392343 K7EIL1 84 aa8.56□□□□□ -1.04
CCDC57-203ENST00000392343 C9orf163Q8N9P6 203 aa8.56□□□□□ -1.04
CCDC57-203ENST00000392343 SPANXA2-OT1Q8N9U9 137 aa8.55□□□□□ -1.04
CCDC57-203ENST00000392343 SPRR1BP22528 89 aa8.54□□□□□ -1.04
CCDC57-203ENST00000392343 COA5Q86WW8 74 aa8.54□□□□□ -1.04
CCDC57-203ENST00000392343 H3BPC8 53 aa8.52□□□□□ -1.04
CCDC57-203ENST00000392343 SPTSSBQ8NFR3 76 aa8.52□□□□□ -1.04
CCDC57-203ENST00000392343 NDUFS5O43920 106 aa8.51□□□□□ -1.05
CCDC57-203ENST00000392343 C4orf48Q5BLP8 95 aa8.51□□□□□ -1.05
CCDC57-203ENST00000392343 LIMD2Q9BT23 127 aa8.5□□□□□ -1.05
CCDC57-203ENST00000392343 CD164Q04900 197 aa8.49□□□□□ -1.05
CCDC57-203ENST00000392343 IGHV6-1A0A0B4J1U7 121 aa8.49□□□□□ -1.05
CCDC57-203ENST00000392343 ANAPC11Q9NYG5 84 aa8.49□□□□□ -1.05
CCDC57-203ENST00000392343 Q96NJ1 140 aa8.48□□□□□ -1.05
CCDC57-203ENST00000392343 IGLV7-46A0A075B6I9 117 aa8.47□□□□□ -1.05
CCDC57-203ENST00000392343 SPAG11AQ6PDA7 123 aa8.47□□□□□ -1.05
CCDC57-203ENST00000392343 A6NED7 52 aa8.47□□□□□ -1.05
CCDC57-203ENST00000392343 FRAS1Q86XX4 4008 aa8.46□□□□□ -1.05
CCDC57-203ENST00000392343 LCA10Q71F78 164 aa8.46□□□□□ -1.05
CCDC57-203ENST00000392343 MOBPQ13875 183 aa8.46□□□□□ -1.06
CCDC57-203ENST00000392343 A0A087X002 238 aa8.44□□□□□ -1.06
CCDC57-203ENST00000392343 C14orf177Q52M58 125 aa8.44□□□□□ -1.06
CCDC57-203ENST00000392343 NOTCH2NLQ7Z3S9 236 aa8.44□□□□□ -1.06
CCDC57-203ENST00000392343 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.44□□□□□ -1.06
CCDC57-203ENST00000392343 PLECQ15149 4684 aaKnown RBP8.44□□□□□ -1.06
CCDC57-203ENST00000392343 C8orf17Q9NRJ1 99 aa8.44□□□□□ -1.06
CCDC57-203ENST00000392343 KRTAP13-1Q8IUC0 172 aa8.43□□□□□ -1.06
CCDC57-203ENST00000392343 APLNQ9ULZ1 77 aa8.43□□□□□ -1.06
CCDC57-203ENST00000392343 Q75L30 129 aa8.39□□□□□ -1.07
CCDC57-203ENST00000392343 SPINK6Q6UWN8 80 aa8.38□□□□□ -1.07
CCDC57-203ENST00000392343 ASB16-AS1Q495Z4 193 aa8.38□□□□□ -1.07
CCDC57-203ENST00000392343 TP53AIP1Q9HCN2 124 aa8.38□□□□□ -1.07
CCDC57-203ENST00000392343 A0A1B0GVX0 72 aa8.37□□□□□ -1.07
CCDC57-203ENST00000392343 CDK2AP2O75956 126 aa8.37□□□□□ -1.07
CCDC57-203ENST00000392343 LOC101927531A0A1B0GV80 90 aa8.37□□□□□ -1.07
CCDC57-203ENST00000392343 HRES1P13985 223 aa8.37□□□□□ -1.07
CCDC57-203ENST00000392343 NBDYA0A0U1RRE5 68 aa8.36□□□□□ -1.07
CCDC57-203ENST00000392343 Q6ZR54 194 aa8.36□□□□□ -1.07
CCDC57-203ENST00000392343 DNAH8Q96JB1 4490 aa8.35□□□□□ -1.07
CCDC57-203ENST00000392343 MRPL34Q9BQ48 92 aaKnown RBP8.35□□□□□ -1.07
CCDC57-203ENST00000392343 MDFIQ99750 246 aa8.34□□□□□ -1.07
CCDC57-203ENST00000392343 SPINK7P58062 85 aa8.33□□□□□ -1.08
CCDC57-203ENST00000392343 SPACA4Q8TDM5 124 aa8.33□□□□□ -1.08
CCDC57-203ENST00000392343 WWC2-AS2Q96NR7 200 aa8.33□□□□□ -1.08
CCDC57-203ENST00000392343 Q6ZRN7 208 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms