RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 PRRC2CQ9Y520 2896 aaKnown RBP0.35□□□□□ -2.35
SNORA40.19-201ENST00000390846 TNRC18O15417 2968 aaPredicted RBP0.35□□□□□ -2.35
SNORA40.19-201ENST00000390846 IQGAP1P46940 1657 aa0.35□□□□□ -2.35
SNORA40.19-201ENST00000390846 IGIPA6NJ69 53 aa0.35□□□□□ -2.35
SNORA40.19-201ENST00000390846 CCL22O00626 93 aa0.35□□□□□ -2.35
SNORA40.19-201ENST00000390846 LINC00158P58513 81 aa0.35□□□□□ -2.35
SNORA40.19-201ENST00000390846 DEFB109BQ30KR1 87 aa0.35□□□□□ -2.35
SNORA40.19-201ENST00000390846 SPTA1P02549 2419 aa0.35□□□□□ -2.35
SNORA40.19-201ENST00000390846 PRM1P04553 51 aa0.34□□□□□ -2.36
SNORA40.19-201ENST00000390846 FCER1GP30273 86 aa0.34□□□□□ -2.36
SNORA40.19-201ENST00000390846 PDE4DIPQ5VU43 2346 aa0.34□□□□□ -2.36
SNORA40.19-201ENST00000390846 COX6B2Q6YFQ2 88 aa0.34□□□□□ -2.36
SNORA40.19-201ENST00000390846 SMIM5Q71RC9 77 aa0.34□□□□□ -2.36
SNORA40.19-201ENST00000390846 UNC79Q9P2D8 2635 aa0.34□□□□□ -2.36
SNORA40.19-201ENST00000390846 PDZD2O15018 2839 aa0.34□□□□□ -2.36
SNORA40.19-201ENST00000390846 ABCA2Q9BZC7 2435 aa0.34□□□□□ -2.36
SNORA40.19-201ENST00000390846 FAT2Q9NYQ8 4349 aa0.34□□□□□ -2.36
SNORA40.19-201ENST00000390846 DEFB130BP0DP73 79 aa0.33□□□□□ -2.36
SNORA40.19-201ENST00000390846 DEFB130AP0DP74 79 aa0.33□□□□□ -2.36
SNORA40.19-201ENST00000390846 DEFB114Q30KQ6 69 aa0.33□□□□□ -2.36
SNORA40.19-201ENST00000390846 KRTAP21-1Q3LI58 79 aa0.33□□□□□ -2.36
SNORA40.19-201ENST00000390846 KIAA0586Q9BVV6 1533 aa0.33□□□□□ -2.36
SNORA40.19-201ENST00000390846 LYNX1G3V0Z9 82 aa0.32□□□□□ -2.36
SNORA40.19-201ENST00000390846 SPINK6Q6UWN8 80 aa0.32□□□□□ -2.36
SNORA40.19-201ENST00000390846 LMO7Q8WWI1 1683 aa0.32□□□□□ -2.36
SNORA40.19-201ENST00000390846 UBR5O95071 2799 aaPredicted RBP0.32□□□□□ -2.36
SNORA40.19-201ENST00000390846 LRP1Q07954 4544 aaKnown RBP0.32□□□□□ -2.36
SNORA40.19-201ENST00000390846 PCNX1Q96RV3 2341 aa0.31□□□□□ -2.36
SNORA40.19-201ENST00000390846 EFCAB6Q5THR3 1501 aa0.31□□□□□ -2.36
SNORA40.19-201ENST00000390846 ADCY10Q96PN6 1610 aa0.31□□□□□ -2.36
SNORA40.19-201ENST00000390846 NAV2Q8IVL1 2488 aa0.3□□□□□ -2.36
SNORA40.19-201ENST00000390846 DDX60Q8IY21 1712 aaKnown RBP0.3□□□□□ -2.36
SNORA40.19-201ENST00000390846 IAPPP10997 89 aa0.3□□□□□ -2.36
SNORA40.19-201ENST00000390846 RPS27P42677 84 aaKnown RBP0.3□□□□□ -2.36
SNORA40.19-201ENST00000390846 RPS27LQ71UM5 84 aaKnown RBP0.3□□□□□ -2.36
SNORA40.19-201ENST00000390846 HRNRQ86YZ3 2850 aaPredicted RBP0.3□□□□□ -2.36
SNORA40.19-201ENST00000390846 USP24Q9UPU5 2620 aa0.3□□□□□ -2.36
SNORA40.19-201ENST00000390846 CHD8Q9HCK8 2581 aa0.29□□□□□ -2.36
SNORA40.19-201ENST00000390846 KMT2AQ03164 3969 aa0.29□□□□□ -2.36
SNORA40.19-201ENST00000390846 ABCC8Q09428 1581 aa0.29□□□□□ -2.36
SNORA40.19-201ENST00000390846 LYSTQ99698 3801 aa0.29□□□□□ -2.36
SNORA40.19-201ENST00000390846 NFAT5O94916 1531 aa0.28□□□□□ -2.36
SNORA40.19-201ENST00000390846 HECTD1Q9ULT8 2610 aa0.28□□□□□ -2.36
SNORA40.19-201ENST00000390846 NSD1Q96L73 2696 aaPredicted RBP0.28□□□□□ -2.36
SNORA40.19-201ENST00000390846 NBASA2RRP1 2371 aa0.28□□□□□ -2.36
SNORA40.19-201ENST00000390846 SETXQ7Z333 2677 aaKnown RBP0.28□□□□□ -2.37
SNORA40.19-201ENST00000390846 EP300Q09472 2414 aaPredicted RBP0.27□□□□□ -2.37
SNORA40.19-201ENST00000390846 ZZEF1O43149 2961 aa0.27□□□□□ -2.37
SNORA40.19-201ENST00000390846 MRPL33O75394 65 aaKnown RBP0.27□□□□□ -2.37
SNORA40.19-201ENST00000390846 CEP290O15078 2479 aa0.27□□□□□ -2.37
SNORA40.19-201ENST00000390846 CACNA1AO00555 2505 aa0.27□□□□□ -2.37
SNORA40.19-201ENST00000390846 COL7A1Q02388 2944 aa0.27□□□□□ -2.37
SNORA40.19-201ENST00000390846 HIVEP3Q5T1R4 2406 aa0.26□□□□□ -2.37
SNORA40.19-201ENST00000390846 HUWE1Q7Z6Z7 4374 aaKnown RBP0.26□□□□□ -2.37
SNORA40.19-201ENST00000390846 SPINK4O60575 86 aa0.26□□□□□ -2.37
SNORA40.19-201ENST00000390846 MAP1BP46821 2468 aaKnown RBP0.26□□□□□ -2.37
SNORA40.19-201ENST00000390846 FLNCQ14315 2725 aa0.26□□□□□ -2.37
SNORA40.19-201ENST00000390846 NCOR2Q9Y618 2525 aa0.25□□□□□ -2.37
SNORA40.19-201ENST00000390846 WNK1Q9H4A3 2382 aa0.25□□□□□ -2.37
SNORA40.19-201ENST00000390846 MINOS1Q5TGZ0 78 aa0.25□□□□□ -2.37
SNORA40.19-201ENST00000390846 U3KQA8 63 aa0.25□□□□□ -2.37
SNORA40.19-201ENST00000390846 SYNE1Q8NF91 8797 aaKnown RBP0.25□□□□□ -2.37
SNORA40.19-201ENST00000390846 MYCBP2O75592 4640 aa0.25□□□□□ -2.37
SNORA40.19-201ENST00000390846 DCHS2Q6V1P9 2916 aa0.24□□□□□ -2.37
SNORA40.19-201ENST00000390846 TOP2AP11388 1531 aaKnown RBP0.24□□□□□ -2.37
SNORA40.19-201ENST00000390846 FAT4Q6V0I7 4981 aa0.24□□□□□ -2.37
SNORA40.19-201ENST00000390846 PHGR1C9JFL3 82 aa0.24□□□□□ -2.37
SNORA40.19-201ENST00000390846 SPINK1P00995 79 aa0.24□□□□□ -2.37
SNORA40.19-201ENST00000390846 NMES1Q9C002 83 aa0.24□□□□□ -2.37
SNORA40.19-201ENST00000390846 S4R3F8 94 aa0.24□□□□□ -2.37
SNORA40.19-201ENST00000390846 MAST4O15021 2626 aa0.24□□□□□ -2.37
SNORA40.19-201ENST00000390846 ACANP16112 2415 aa0.24□□□□□ -2.37
SNORA40.19-201ENST00000390846 A0A0C4DFX4 3053 aa0.24□□□□□ -2.37
SNORA40.19-201ENST00000390846 FAM208AQ9UK61 1670 aaKnown RBP0.24□□□□□ -2.37
SNORA40.19-201ENST00000390846 NF1P21359 2839 aa0.23□□□□□ -2.37
SNORA40.19-201ENST00000390846 C6orf48Q9UBA6 75 aa0.23□□□□□ -2.37
SNORA40.19-201ENST00000390846 IQGAP2Q13576 1575 aa0.23□□□□□ -2.37
SNORA40.19-201ENST00000390846 DMXL1Q9Y485 3027 aa0.22□□□□□ -2.37
SNORA40.19-201ENST00000390846 PKD1P98161 4303 aa0.22□□□□□ -2.37
SNORA40.19-201ENST00000390846 SNRPGP15A8MWD9 76 aa0.22□□□□□ -2.37
SNORA40.19-201ENST00000390846 M0R2T5 61 aa0.22□□□□□ -2.37
SNORA40.19-201ENST00000390846 TFF3Q07654 80 aa0.22□□□□□ -2.37
SNORA40.19-201ENST00000390846 DEFB135Q30KP9 77 aa0.22□□□□□ -2.37
SNORA40.19-201ENST00000390846 LINC00308Q8TCZ7 52 aa0.22□□□□□ -2.37
SNORA40.19-201ENST00000390846 KIF21BO75037 1637 aa0.22□□□□□ -2.37
SNORA40.19-201ENST00000390846 GCN1Q92616 2671 aaKnown RBP0.22□□□□□ -2.37
SNORA40.19-201ENST00000390846 IGSF10Q6WRI0 2623 aa0.22□□□□□ -2.37
SNORA40.19-201ENST00000390846 MAP1AP78559 2803 aaPredicted RBP0.22□□□□□ -2.37
SNORA40.19-201ENST00000390846 PTPN13Q12923 2485 aa0.22□□□□□ -2.37
SNORA40.19-201ENST00000390846 VPS13BQ7Z7G8 4022 aa0.22□□□□□ -2.37
SNORA40.19-201ENST00000390846 TACC2O95359 2948 aa0.21□□□□□ -2.38
SNORA40.19-201ENST00000390846 HMCN2Q8NDA2 5059 aa0.21□□□□□ -2.38
SNORA40.19-201ENST00000390846 STAB1Q9NY15 2570 aa0.21□□□□□ -2.38
SNORA40.19-201ENST00000390846 CREBBPQ92793 2442 aa0.21□□□□□ -2.38
SNORA40.19-201ENST00000390846 WT1-ASQ06250 92 aa0.21□□□□□ -2.38
SNORA40.19-201ENST00000390846 SRRM2Q9UQ35 2752 aaKnown RBP0.21□□□□□ -2.38
SNORA40.19-201ENST00000390846 APC2O95996 2303 aa0.2□□□□□ -2.38
SNORA40.19-201ENST00000390846 PKD1L2Q7Z442 2459 aa0.2□□□□□ -2.38
SNORA40.19-201ENST00000390846 SPRR2DP22532 72 aa0.2□□□□□ -2.38
SNORA40.19-201ENST00000390846 DEFB106AQ8N104 65 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms