RNA–Protein interactions for RNA: ENST00000390495.1

TRAJ42-201, Transcript of T cell receptor alpha joining 42, humanhuman

APPRIS P1 BASIC

Gene TRAJ42, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ42-201ENST00000390495 TSPAN19P0C672 248 aa-7.58□□□□□ -3.62
TRAJ42-201ENST00000390495 COPS9Q8WXC6 57 aa-7.58□□□□□ -3.62
TRAJ42-201ENST00000390495 MED14O60244 1454 aa-7.58□□□□□ -3.62
TRAJ42-201ENST00000390495 MYH4Q9Y623 1939 aa-7.58□□□□□ -3.62
TRAJ42-201ENST00000390495 LLPHQ9BRT6 129 aaKnown RBP-7.59□□□□□ -3.62
TRAJ42-201ENST00000390495 PDCD10Q9BUL8 212 aa-7.59□□□□□ -3.62
TRAJ42-201ENST00000390495 RGPD1P0DJD0 1748 aa-7.6□□□□□ -3.63
TRAJ42-201ENST00000390495 CCDC58Q4VC31 144 aa-7.6□□□□□ -3.63
TRAJ42-201ENST00000390495 BAZ1AQ9NRL2 1556 aaPredicted RBP-7.61□□□□□ -3.63
TRAJ42-201ENST00000390495 J3QR89 54 aa-7.61□□□□□ -3.63
TRAJ42-201ENST00000390495 CTXN2P0C2S0 81 aa-7.61□□□□□ -3.63
TRAJ42-201ENST00000390495 ROBO1Q9Y6N7 1651 aa-7.62□□□□□ -3.63
TRAJ42-201ENST00000390495 MORN2Q502X0 79 aa-7.62□□□□□ -3.63
TRAJ42-201ENST00000390495 CGREF1Q99674 301 aa-7.62□□□□□ -3.63
TRAJ42-201ENST00000390495 UNC80Q8N2C7 3258 aa-7.63□□□□□ -3.63
TRAJ42-201ENST00000390495 ZNF436-AS1Q8NC38 126 aaPredicted RBP-7.63□□□□□ -3.63
TRAJ42-201ENST00000390495 HOPXQ9BPY8 73 aaPredicted RBP-7.63□□□□□ -3.63
TRAJ42-201ENST00000390495 AIF1LQ9BQI0 150 aa-7.63□□□□□ -3.63
TRAJ42-201ENST00000390495 GSKIPQ9P0R6 139 aa-7.63□□□□□ -3.63
TRAJ42-201ENST00000390495 ATP10BO94823 1461 aa-7.63□□□□□ -3.63
TRAJ42-201ENST00000390495 MRPS10P82664 201 aaKnown RBP-7.64□□□□□ -3.63
TRAJ42-201ENST00000390495 CD163L1Q9NR16 1453 aa-7.64□□□□□ -3.63
TRAJ42-201ENST00000390495 VCANP13611 3396 aa-7.64□□□□□ -3.63
TRAJ42-201ENST00000390495 NAP1L6A6NFF2 107 aa-7.65□□□□□ -3.63
TRAJ42-201ENST00000390495 IQCF6A8MYZ5 107 aa-7.65□□□□□ -3.63
TRAJ42-201ENST00000390495 K7ERU9 68 aa-7.65□□□□□ -3.63
TRAJ42-201ENST00000390495 NDUFC1O43677 76 aa-7.65□□□□□ -3.63
TRAJ42-201ENST00000390495 NCOA2Q15596 1464 aa-7.65□□□□□ -3.63
TRAJ42-201ENST00000390495 USP34Q70CQ2 3546 aa-7.66□□□□□ -3.64
TRAJ42-201ENST00000390495 CHD1O14646 1710 aa-7.66□□□□□ -3.64
TRAJ42-201ENST00000390495 DDX60LQ5H9U9 1706 aaKnown RBP-7.66□□□□□ -3.64
TRAJ42-201ENST00000390495 DOT1LQ8TEK3 1739 aa-7.66□□□□□ -3.64
TRAJ42-201ENST00000390495 SMCO1Q147U7 214 aa-7.66□□□□□ -3.64
TRAJ42-201ENST00000390495 D6R8Y8 96 aa-7.67□□□□□ -3.64
TRAJ42-201ENST00000390495 ALKAL2Q6UX46 152 aa-7.67□□□□□ -3.64
TRAJ42-201ENST00000390495 MUSTN1Q8IVN3 82 aa-7.67□□□□□ -3.64
TRAJ42-201ENST00000390495 UBR1Q8IWV7 1749 aa-7.67□□□□□ -3.64
TRAJ42-201ENST00000390495 ITSN1Q15811 1721 aa-7.68□□□□□ -3.64
TRAJ42-201ENST00000390495 TRBV25-1A0A075B6N4 114 aa-7.68□□□□□ -3.64
TRAJ42-201ENST00000390495 PMCHL1Q16048 86 aa-7.68□□□□□ -3.64
TRAJ42-201ENST00000390495 TTTY10Q9BZA0 68 aa-7.68□□□□□ -3.64
TRAJ42-201ENST00000390495 GINS2Q9Y248 185 aa-7.68□□□□□ -3.64
TRAJ42-201ENST00000390495 CRYM-AS1A6NIL9 109 aa-7.69□□□□□ -3.64
TRAJ42-201ENST00000390495 CCDC167Q9P0B6 97 aa-7.69□□□□□ -3.64
TRAJ42-201ENST00000390495 THOC2Q8NI27 1593 aaKnown RBP-7.7□□□□□ -3.64
TRAJ42-201ENST00000390495 ABCC2Q92887 1545 aa-7.7□□□□□ -3.64
TRAJ42-201ENST00000390495 CATR1Q13166 79 aa-7.71□□□□□ -3.64
TRAJ42-201ENST00000390495 CCDC153Q494R4 210 aa-7.71□□□□□ -3.64
TRAJ42-201ENST00000390495 TRIQKQ629K1 86 aa-7.71□□□□□ -3.64
TRAJ42-201ENST00000390495 SFTA3P0C7M3 94 aa-7.72□□□□□ -3.65
TRAJ42-201ENST00000390495 MINOS1Q5TGZ0 78 aa-7.73□□□□□ -3.65
TRAJ42-201ENST00000390495 SPHKAPQ2M3C7 1700 aa-7.74□□□□□ -3.65
TRAJ42-201ENST00000390495 EEA1Q15075 1411 aa-7.74□□□□□ -3.65
TRAJ42-201ENST00000390495 SMIM3Q9BZL3 60 aa-7.74□□□□□ -3.65
TRAJ42-201ENST00000390495 SPANXCQ9NY87 97 aa-7.74□□□□□ -3.65
TRAJ42-201ENST00000390495 S100GP29377 79 aa-7.75□□□□□ -3.65
TRAJ42-201ENST00000390495 SKA2Q8WVK7 121 aaPredicted RBP-7.75□□□□□ -3.65
TRAJ42-201ENST00000390495 CCNB3Q8WWL7 1395 aa-7.75□□□□□ -3.65
TRAJ42-201ENST00000390495 TSTD3H0UI37 97 aa-7.76□□□□□ -3.65
TRAJ42-201ENST00000390495 NCBP2-AS2Q69YL0 99 aa-7.76□□□□□ -3.65
TRAJ42-201ENST00000390495 CACFD1Q9UGQ2 172 aa-7.76□□□□□ -3.65
TRAJ42-201ENST00000390495 LTN1O94822 1766 aa-7.76□□□□□ -3.65
TRAJ42-201ENST00000390495 HMGN3Q15651 99 aa-7.77□□□□□ -3.65
TRAJ42-201ENST00000390495 PCBD2Q9H0N5 130 aa-7.77□□□□□ -3.65
TRAJ42-201ENST00000390495 A0A1B0GUT8 65 aa-7.78□□□□□ -3.65
TRAJ42-201ENST00000390495 M0R2Z0 102 aa-7.78□□□□□ -3.65
TRAJ42-201ENST00000390495 ATP5EP56381 51 aaPredicted RBP-7.78□□□□□ -3.65
TRAJ42-201ENST00000390495 CC2D2AQ9P2K1 1620 aa-7.78□□□□□ -3.66
TRAJ42-201ENST00000390495 ZFYVE16Q7Z3T8 1539 aa-7.78□□□□□ -3.66
TRAJ42-201ENST00000390495 DNAH12Q6ZR08 3092 aa-7.79□□□□□ -3.66
TRAJ42-201ENST00000390495 TRAV21A0A0B4J279 112 aa-7.79□□□□□ -3.66
TRAJ42-201ENST00000390495 GID8Q9NWU2 228 aa-7.79□□□□□ -3.66
TRAJ42-201ENST00000390495 DPH3P1Q9H4G8 78 aa-7.8□□□□□ -3.66
TRAJ42-201ENST00000390495 APOC2P02655 101 aa-7.81□□□□□ -3.66
TRAJ42-201ENST00000390495 COPZ1P61923 177 aa-7.81□□□□□ -3.66
TRAJ42-201ENST00000390495 FHAD1B1AJZ9 1412 aa-7.81□□□□□ -3.66
TRAJ42-201ENST00000390495 FCER1GP30273 86 aa-7.82□□□□□ -3.66
TRAJ42-201ENST00000390495 ACBD7Q8N6N7 88 aa-7.82□□□□□ -3.66
TRAJ42-201ENST00000390495 DEFB131BA0A096LNP1 70 aa-7.83□□□□□ -3.66
TRAJ42-201ENST00000390495 PPLO60437 1756 aa-7.84□□□□□ -3.66
TRAJ42-201ENST00000390495 UQCRHP07919 91 aa-7.86□□□□□ -3.67
TRAJ42-201ENST00000390495 MAP3K4Q9Y6R4 1608 aa-7.86□□□□□ -3.67
TRAJ42-201ENST00000390495 OOSP1A8MZH6 123 aa-7.87□□□□□ -3.67
TRAJ42-201ENST00000390495 C20orf78Q9BR46 151 aa-7.87□□□□□ -3.67
TRAJ42-201ENST00000390495 C6orf48Q9UBA6 75 aa-7.87□□□□□ -3.67
TRAJ42-201ENST00000390495 RAPGEF2Q9Y4G8 1499 aa-7.87□□□□□ -3.67
TRAJ42-201ENST00000390495 ETDBQ3ZM63 59 aa-7.89□□□□□ -3.67
TRAJ42-201ENST00000390495 NEXMIFQ5QGS0 1516 aa-7.89□□□□□ -3.67
TRAJ42-201ENST00000390495 DIP2BQ9P265 1576 aa-7.89□□□□□ -3.67
TRAJ42-201ENST00000390495 PREX2Q70Z35 1606 aa-7.91□□□□□ -3.68
TRAJ42-201ENST00000390495 KRTDAPP60985 99 aa-7.91□□□□□ -3.68
TRAJ42-201ENST00000390495 RPS25P62851 125 aaKnown RBP-7.91□□□□□ -3.68
TRAJ42-201ENST00000390495 HSPB11Q9Y547 144 aa-7.91□□□□□ -3.68
TRAJ42-201ENST00000390495 CENPFP49454 3210 aa-7.91□□□□□ -3.68
TRAJ42-201ENST00000390495 MPC2O95563 127 aa-7.93□□□□□ -3.68
TRAJ42-201ENST00000390495 NRXN1Q9ULB1 1477 aa-7.94□□□□□ -3.68
TRAJ42-201ENST00000390495 MRPL33O75394 65 aaKnown RBP-7.94□□□□□ -3.68
TRAJ42-201ENST00000390495 DR1Q01658 176 aa-7.94□□□□□ -3.68
TRAJ42-201ENST00000390495 KIF14Q15058 1648 aa-7.94□□□□□ -3.68
TRAJ42-201ENST00000390495 FAM24AA6NFZ4 105 aa-7.95□□□□□ -3.68
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms