RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 ANK2Q01484 3957 aa2.19□□□□□ -2.06
TRAV39-201ENST00000390466 IGLV8-61A0A075B6I0 122 aa2.19□□□□□ -2.06
TRAV39-201ENST00000390466 IGKV2D-24A0A075B6R9 120 aa2.19□□□□□ -2.06
TRAV39-201ENST00000390466 LOC101927531A0A1B0GV80 90 aa2.19□□□□□ -2.06
TRAV39-201ENST00000390466 A6NN06 94 aa2.19□□□□□ -2.06
TRAV39-201ENST00000390466 C16orf90A8MZG2 172 aa2.19□□□□□ -2.06
TRAV39-201ENST00000390466 TLX1NBP0CAT3 122 aa2.19□□□□□ -2.06
TRAV39-201ENST00000390466 DEFB113Q30KQ7 82 aa2.19□□□□□ -2.06
TRAV39-201ENST00000390466 HIGD2BQ4VC39 106 aa2.19□□□□□ -2.06
TRAV39-201ENST00000390466 WFDC10BQ8IUB3 73 aa2.19□□□□□ -2.06
TRAV39-201ENST00000390466 Q8N9P0 234 aaPredicted RBP2.19□□□□□ -2.06
TRAV39-201ENST00000390466 CMYA5Q8N3K9 4069 aa2.19□□□□□ -2.06
TRAV39-201ENST00000390466 NBEAL1Q6ZS30 2694 aa2.18□□□□□ -2.06
TRAV39-201ENST00000390466 LRCOL1A6NCL2 159 aa2.18□□□□□ -2.06
TRAV39-201ENST00000390466 HCG22E2RYF7 251 aa2.18□□□□□ -2.06
TRAV39-201ENST00000390466 PSPHP1O15172 72 aa2.18□□□□□ -2.06
TRAV39-201ENST00000390466 CD164Q04900 197 aa2.18□□□□□ -2.06
TRAV39-201ENST00000390466 C1orf137Q5JT78 98 aa2.18□□□□□ -2.06
TRAV39-201ENST00000390466 LCA10Q71F78 164 aa2.18□□□□□ -2.06
TRAV39-201ENST00000390466 STAB1Q9NY15 2570 aa2.18□□□□□ -2.06
TRAV39-201ENST00000390466 IGLV1-50A0A075B6I6 118 aa2.17□□□□□ -2.06
TRAV39-201ENST00000390466 DEFB4AO15263 64 aa2.17□□□□□ -2.06
TRAV39-201ENST00000390466 CNBPP62633 177 aaKnown RBP2.17□□□□□ -2.06
TRAV39-201ENST00000390466 DEFB135Q30KP9 77 aa2.17□□□□□ -2.06
TRAV39-201ENST00000390466 ASB16-AS1Q495Z4 193 aa2.17□□□□□ -2.06
TRAV39-201ENST00000390466 Q75L30 129 aa2.17□□□□□ -2.06
TRAV39-201ENST00000390466 LINC00476Q8WZB0 136 aa2.17□□□□□ -2.06
TRAV39-201ENST00000390466 CAMK2N2Q96S95 79 aa2.17□□□□□ -2.06
TRAV39-201ENST00000390466 B9D2Q9BPU9 175 aa2.17□□□□□ -2.06
TRAV39-201ENST00000390466 DHRS4-AS1Q9P1J3 65 aa2.17□□□□□ -2.06
TRAV39-201ENST00000390466 ATRQ13535 2644 aa2.17□□□□□ -2.06
TRAV39-201ENST00000390466 HUWE1Q7Z6Z7 4374 aaKnown RBP2.17□□□□□ -2.06
TRAV39-201ENST00000390466 NBEAL2Q6ZNJ1 2754 aa2.16□□□□□ -2.06
TRAV39-201ENST00000390466 DNHD1Q96M86 4753 aa2.16□□□□□ -2.06
TRAV39-201ENST00000390466 A0A0G2JQZ4 141 aa2.16□□□□□ -2.06
TRAV39-201ENST00000390466 A0A1W2PNN7 141 aa2.16□□□□□ -2.06
TRAV39-201ENST00000390466 FAM168BA1KXE4 195 aa2.16□□□□□ -2.06
TRAV39-201ENST00000390466 H3BNG1 76 aa2.16□□□□□ -2.06
TRAV39-201ENST00000390466 H3BPC8 53 aa2.16□□□□□ -2.06
TRAV39-201ENST00000390466 PRR4Q16378 134 aa2.16□□□□□ -2.06
TRAV39-201ENST00000390466 IGFL1Q6UW32 110 aa2.16□□□□□ -2.06
TRAV39-201ENST00000390466 KTN1-AS1Q86SY8 53 aa2.16□□□□□ -2.06
TRAV39-201ENST00000390466 TENM3Q9P273 2699 aa2.15□□□□□ -2.06
TRAV39-201ENST00000390466 NDUFB1O75438 58 aa2.15□□□□□ -2.07
TRAV39-201ENST00000390466 SPRR1BP22528 89 aa2.15□□□□□ -2.07
TRAV39-201ENST00000390466 UBE2BP63146 152 aa2.15□□□□□ -2.07
TRAV39-201ENST00000390466 KRTAP24-1Q3LI83 254 aa2.15□□□□□ -2.07
TRAV39-201ENST00000390466 LINC01556Q5JQF7 62 aa2.15□□□□□ -2.07
TRAV39-201ENST00000390466 PHF5AQ7RTV0 110 aaKnown RBP2.15□□□□□ -2.07
TRAV39-201ENST00000390466 LINC00208Q96KT6 92 aa2.15□□□□□ -2.07
TRAV39-201ENST00000390466 LINC00472Q9H8W2 130 aa2.15□□□□□ -2.07
TRAV39-201ENST00000390466 DYNC2H1Q8NCM8 4307 aaKnown RBP2.15□□□□□ -2.07
TRAV39-201ENST00000390466 TGP01266 2768 aa2.15□□□□□ -2.07
TRAV39-201ENST00000390466 DNAH9Q9NYC9 4486 aa2.15□□□□□ -2.07
TRAV39-201ENST00000390466 DNAH10Q8IVF4 4471 aa2.14□□□□□ -2.07
TRAV39-201ENST00000390466 MMP24-AS1A0A0U1RRL7 71 aa2.14□□□□□ -2.07
TRAV39-201ENST00000390466 H0Y9P7 68 aa2.14□□□□□ -2.07
TRAV39-201ENST00000390466 SPART-AS1P0CW21 52 aa2.14□□□□□ -2.07
TRAV39-201ENST00000390466 UBE2AP49459 152 aa2.14□□□□□ -2.07
TRAV39-201ENST00000390466 APOC4P55056 127 aa2.14□□□□□ -2.07
TRAV39-201ENST00000390466 CASC10Q5T4H9 136 aa2.14□□□□□ -2.07
TRAV39-201ENST00000390466 COA5Q86WW8 74 aa2.14□□□□□ -2.07
TRAV39-201ENST00000390466 WFDC13Q8IUB5 93 aa2.14□□□□□ -2.07
TRAV39-201ENST00000390466 DEFB105AQ8NG35 78 aa2.14□□□□□ -2.07
TRAV39-201ENST00000390466 LIMD2Q9BT23 127 aa2.14□□□□□ -2.07
TRAV39-201ENST00000390466 RBM12B-AS1Q9P1G2 102 aa2.14□□□□□ -2.07
TRAV39-201ENST00000390466 LINC01558Q9Y6Z2 57 aa2.14□□□□□ -2.07
TRAV39-201ENST00000390466 DNAH17Q9UFH2 4485 aa2.14□□□□□ -2.07
TRAV39-201ENST00000390466 PKD1L1Q8TDX9 2849 aa2.14□□□□□ -2.07
TRAV39-201ENST00000390466 DNAH8Q96JB1 4490 aa2.14□□□□□ -2.07
TRAV39-201ENST00000390466 TENM2Q9NT68 2774 aa2.14□□□□□ -2.07
TRAV39-201ENST00000390466 VWFP04275 2813 aa2.13□□□□□ -2.07
TRAV39-201ENST00000390466 IGLV7-46A0A075B6I9 117 aa2.13□□□□□ -2.07
TRAV39-201ENST00000390466 RPL37AP8A6NKH3 93 aa2.13□□□□□ -2.07
TRAV39-201ENST00000390466 DNAH10OSP0CZ25 163 aa2.13□□□□□ -2.07
TRAV39-201ENST00000390466 ATP11AUNQ6ZP68 121 aa2.13□□□□□ -2.07
TRAV39-201ENST00000390466 KRTAP11-1Q8IUC1 163 aa2.13□□□□□ -2.07
TRAV39-201ENST00000390466 NKAPP1Q8N9T2 125 aa2.13□□□□□ -2.07
TRAV39-201ENST00000390466 Q96NJ1 140 aa2.13□□□□□ -2.07
TRAV39-201ENST00000390466 PRR15LQ9BU68 103 aa2.13□□□□□ -2.07
TRAV39-201ENST00000390466 CDC42SE1Q9NRR8 79 aa2.13□□□□□ -2.07
TRAV39-201ENST00000390466 A0A087WSZ3 146 aa2.12□□□□□ -2.07
TRAV39-201ENST00000390466 A8MWP4 228 aa2.12□□□□□ -2.07
TRAV39-201ENST00000390466 HTN3P15516 51 aa2.12□□□□□ -2.07
TRAV39-201ENST00000390466 MP68P56378 58 aa2.12□□□□□ -2.07
TRAV39-201ENST00000390466 RPL37AP61513 92 aaKnown RBP2.12□□□□□ -2.07
TRAV39-201ENST00000390466 MOBPQ13875 183 aa2.12□□□□□ -2.07
TRAV39-201ENST00000390466 KRTAP13-3Q3SY46 172 aa2.12□□□□□ -2.07
TRAV39-201ENST00000390466 Q6ZR54 194 aa2.12□□□□□ -2.07
TRAV39-201ENST00000390466 MRPL55Q7Z7F7 128 aaKnown RBP2.12□□□□□ -2.07
TRAV39-201ENST00000390466 TENM1Q9UKZ4 2725 aa2.12□□□□□ -2.07
TRAV39-201ENST00000390466 CHKB-CPT1BH3BT56 60 aa2.11□□□□□ -2.07
TRAV39-201ENST00000390466 NDUFS5O43920 106 aa2.11□□□□□ -2.07
TRAV39-201ENST00000390466 CHTF8P0CG12 524 aa2.11□□□□□ -2.07
TRAV39-201ENST00000390466 DEFB116Q30KQ4 102 aa2.11□□□□□ -2.07
TRAV39-201ENST00000390466 LCE5AQ5TCM9 118 aa2.11□□□□□ -2.07
TRAV39-201ENST00000390466 REG3GQ6UW15 175 aa2.11□□□□□ -2.07
TRAV39-201ENST00000390466 CASC2Q6XLA1 102 aa2.11□□□□□ -2.07
TRAV39-201ENST00000390466 C7orf65Q6ZTY9 151 aa2.11□□□□□ -2.07
TRAV39-201ENST00000390466 RETNQ9HD89 108 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms