RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 PPP1R1CQ8WVI7 109 aa3.01□□□□□ -1.93
TRAV35-201ENST00000390462 CDC42SE2Q9NRR3 84 aa3.01□□□□□ -1.93
TRAV35-201ENST00000390462 KAAG1Q9UBP8 84 aa3.01□□□□□ -1.93
TRAV35-201ENST00000390462 HMGN4O00479 90 aa3□□□□□ -1.93
TRAV35-201ENST00000390462 KRTAP10-1P60331 282 aa3□□□□□ -1.93
TRAV35-201ENST00000390462 KRTAP13-4Q3LI77 160 aa3□□□□□ -1.93
TRAV35-201ENST00000390462 HMCN2Q8NDA2 5059 aa3□□□□□ -1.93
TRAV35-201ENST00000390462 IQCF6A8MYZ5 107 aa2.99□□□□□ -1.93
TRAV35-201ENST00000390462 M0R1W7 72 aa2.99□□□□□ -1.93
TRAV35-201ENST00000390462 KRTAP12-2P59991 146 aa2.99□□□□□ -1.93
TRAV35-201ENST00000390462 SFTA2Q6UW10 78 aa2.99□□□□□ -1.93
TRAV35-201ENST00000390462 SPCS1Q9Y6A9 102 aa2.99□□□□□ -1.93
TRAV35-201ENST00000390462 LRP1BQ9NZR2 4599 aa2.99□□□□□ -1.93
TRAV35-201ENST00000390462 A0A1B0GWA3 101 aa2.98□□□□□ -1.93
TRAV35-201ENST00000390462 SPAG11BQ08648 103 aa2.98□□□□□ -1.93
TRAV35-201ENST00000390462 SPAG11AQ6PDA7 123 aa2.98□□□□□ -1.93
TRAV35-201ENST00000390462 HIGD1BQ9P298 99 aa2.98□□□□□ -1.93
TRAV35-201ENST00000390462 PRO0461Q9UI25 63 aa2.98□□□□□ -1.93
TRAV35-201ENST00000390462 DNAH5Q8TE73 4624 aa2.98□□□□□ -1.93
TRAV35-201ENST00000390462 RNF213Q63HN8 5207 aa2.97□□□□□ -1.93
TRAV35-201ENST00000390462 TMEM14DPA8MWL7 114 aa2.97□□□□□ -1.93
TRAV35-201ENST00000390462 ADIRFQ15847 76 aa2.97□□□□□ -1.93
TRAV35-201ENST00000390462 LINC00208Q96KT6 92 aa2.97□□□□□ -1.93
TRAV35-201ENST00000390462 GAFA1Q96PS6 74 aa2.97□□□□□ -1.93
TRAV35-201ENST00000390462 ST20Q9HBF5 79 aa2.97□□□□□ -1.93
TRAV35-201ENST00000390462 V9GYH0 126 aa2.97□□□□□ -1.93
TRAV35-201ENST00000390462 V9GYV3 84 aa2.97□□□□□ -1.93
TRAV35-201ENST00000390462 A0A087WTM6 91 aa2.96□□□□□ -1.94
TRAV35-201ENST00000390462 H3BSH0 61 aa2.96□□□□□ -1.94
TRAV35-201ENST00000390462 KLKP1Q107X0 134 aa2.96□□□□□ -1.94
TRAV35-201ENST00000390462 KRTAP13-3Q3SY46 172 aa2.96□□□□□ -1.94
TRAV35-201ENST00000390462 ETDBQ3ZM63 59 aa2.96□□□□□ -1.94
TRAV35-201ENST00000390462 UNQ6190/PRO20217Q6UXQ8 127 aa2.96□□□□□ -1.94
TRAV35-201ENST00000390462 Q86TA4 180 aa2.96□□□□□ -1.94
TRAV35-201ENST00000390462 OBSCN-AS1Q96MR7 158 aa2.96□□□□□ -1.94
TRAV35-201ENST00000390462 HILPDAQ9Y5L2 63 aa2.96□□□□□ -1.94
TRAV35-201ENST00000390462 MUC2Q02817 5179 aa2.96□□□□□ -1.94
TRAV35-201ENST00000390462 SRRM2Q9UQ35 2752 aaKnown RBP2.95□□□□□ -1.94
TRAV35-201ENST00000390462 FLG2Q5D862 2391 aaPredicted RBP2.95□□□□□ -1.94
TRAV35-201ENST00000390462 TRBV25-1A0A075B6N4 114 aa2.95□□□□□ -1.94
TRAV35-201ENST00000390462 FXYD1O00168 92 aa2.95□□□□□ -1.94
TRAV35-201ENST00000390462 CCL18P55774 89 aa2.95□□□□□ -1.94
TRAV35-201ENST00000390462 CAV3P56539 151 aa2.95□□□□□ -1.94
TRAV35-201ENST00000390462 TMEM170BQ5T4T1 132 aa2.95□□□□□ -1.94
TRAV35-201ENST00000390462 VPS13BQ7Z7G8 4022 aa2.95□□□□□ -1.94
TRAV35-201ENST00000390462 PMCHL1Q16048 86 aa2.94□□□□□ -1.94
TRAV35-201ENST00000390462 PP632Q6XCG6 107 aa2.94□□□□□ -1.94
TRAV35-201ENST00000390462 FAM223AQ8IWN6 122 aa2.94□□□□□ -1.94
TRAV35-201ENST00000390462 WFDC6Q9BQY6 131 aa2.94□□□□□ -1.94
TRAV35-201ENST00000390462 R4GMQ9 66 aa2.94□□□□□ -1.94
TRAV35-201ENST00000390462 A0A1W2PPM0 123 aa2.93□□□□□ -1.94
TRAV35-201ENST00000390462 BCE1O60756 84 aa2.93□□□□□ -1.94
TRAV35-201ENST00000390462 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.92□□□□□ -1.94
TRAV35-201ENST00000390462 CPSF4LA6NMK7 179 aaKnown RBP2.92□□□□□ -1.94
TRAV35-201ENST00000390462 NMSQ5H8A3 153 aa2.92□□□□□ -1.94
TRAV35-201ENST00000390462 MINOS1Q5TGZ0 78 aa2.92□□□□□ -1.94
TRAV35-201ENST00000390462 SMIM11AP58511 58 aa2.91□□□□□ -1.94
TRAV35-201ENST00000390462 Q6ZQY7 126 aa2.91□□□□□ -1.94
TRAV35-201ENST00000390462 S100A3P33764 101 aa2.9□□□□□ -1.95
TRAV35-201ENST00000390462 WFDC2Q14508 124 aa2.9□□□□□ -1.95
TRAV35-201ENST00000390462 AMELXQ99217 191 aa2.9□□□□□ -1.95
TRAV35-201ENST00000390462 TMEM14BQ9NUH8 114 aa2.9□□□□□ -1.95
TRAV35-201ENST00000390462 ARL2-SNX15V9GYD0 113 aa2.9□□□□□ -1.95
TRAV35-201ENST00000390462 F8VRH5 84 aa2.89□□□□□ -1.95
TRAV35-201ENST00000390462 SAA2P0DJI9 122 aaPredicted RBP2.89□□□□□ -1.95
TRAV35-201ENST00000390462 FAT1Q14517 4588 aa2.89□□□□□ -1.95
TRAV35-201ENST00000390462 PCOTHQ58A44 107 aa2.89□□□□□ -1.95
TRAV35-201ENST00000390462 SMIM31A0A1B0GVY4 71 aa2.88□□□□□ -1.95
TRAV35-201ENST00000390462 KANTRA0A1W2PQU2 76 aa2.88□□□□□ -1.95
TRAV35-201ENST00000390462 F2Z2F3 143 aa2.88□□□□□ -1.95
TRAV35-201ENST00000390462 M0R135 149 aa2.88□□□□□ -1.95
TRAV35-201ENST00000390462 PSMG4Q5JS54 123 aa2.88□□□□□ -1.95
TRAV35-201ENST00000390462 SMCO4Q9NRQ5 59 aa2.88□□□□□ -1.95
TRAV35-201ENST00000390462 ZNF815PA8K554 130 aa2.87□□□□□ -1.95
TRAV35-201ENST00000390462 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.87□□□□□ -1.95
TRAV35-201ENST00000390462 LINC01600Q96MT4 127 aa2.87□□□□□ -1.95
TRAV35-201ENST00000390462 APLNQ9ULZ1 77 aa2.87□□□□□ -1.95
TRAV35-201ENST00000390462 FAM223BA6NKX1 122 aa2.86□□□□□ -1.95
TRAV35-201ENST00000390462 IGLC2P0DOY2 106 aa2.86□□□□□ -1.95
TRAV35-201ENST00000390462 IGLC3P0DOY3 106 aa2.86□□□□□ -1.95
TRAV35-201ENST00000390462 BVES-AS1Q5T3Y7 98 aa2.86□□□□□ -1.95
TRAV35-201ENST00000390462 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
TRAV35-201ENST00000390462 BAGE3Q86Y29 109 aa2.86□□□□□ -1.95
TRAV35-201ENST00000390462 G3V318 75 aa2.85□□□□□ -1.95
TRAV35-201ENST00000390462 RPS27P42677 84 aaKnown RBP2.85□□□□□ -1.95
TRAV35-201ENST00000390462 BAGE2Q86Y30 109 aa2.85□□□□□ -1.95
TRAV35-201ENST00000390462 Q96NJ1 140 aa2.85□□□□□ -1.95
TRAV35-201ENST00000390462 LINC01558Q9Y6Z2 57 aa2.85□□□□□ -1.95
TRAV35-201ENST00000390462 CTXND1A0A1B0GTU2 59 aa2.84□□□□□ -1.95
TRAV35-201ENST00000390462 F8WEM9 126 aa2.84□□□□□ -1.95
TRAV35-201ENST00000390462 DEFB135Q30KP9 77 aa2.84□□□□□ -1.95
TRAV35-201ENST00000390462 Q5VSD8 79 aa2.84□□□□□ -1.95
TRAV35-201ENST00000390462 CFAP126Q5VTH2 177 aa2.84□□□□□ -1.95
TRAV35-201ENST00000390462 FAT4Q6V0I7 4981 aa2.84□□□□□ -1.95
TRAV35-201ENST00000390462 LRP2P98164 4655 aa2.84□□□□□ -1.95
TRAV35-201ENST00000390462 KRTAP9-6A8MVA2 160 aa2.83□□□□□ -1.96
TRAV35-201ENST00000390462 UQCR11O14957 56 aa2.83□□□□□ -1.96
TRAV35-201ENST00000390462 ACYP1P07311 99 aa2.83□□□□□ -1.96
TRAV35-201ENST00000390462 DEFA5Q01523 94 aa2.83□□□□□ -1.96
TRAV35-201ENST00000390462 LINC00643Q86TS7 51 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms