RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 PRO0628Q9UI54 55 aa8.54□□□□□ -1.04
PTPRN2-203ENST00000389418 ANAPC11Q9NYG5 84 aa8.53□□□□□ -1.04
PTPRN2-203ENST00000389418 WIPF1O43516 503 aa8.52□□□□□ -1.05
PTPRN2-203ENST00000389418 MUC3AQ02505 3323 aa8.52□□□□□ -1.05
PTPRN2-203ENST00000389418 TRAV22A0A0B4J277 110 aa8.52□□□□□ -1.05
PTPRN2-203ENST00000389418 SPAG11AQ6PDA7 123 aa8.52□□□□□ -1.05
PTPRN2-203ENST00000389418 ZNF861PO60384 105 aa8.51□□□□□ -1.05
PTPRN2-203ENST00000389418 ACYP2P14621 99 aa8.51□□□□□ -1.05
PTPRN2-203ENST00000389418 PMAIP1Q13794 54 aa8.51□□□□□ -1.05
PTPRN2-203ENST00000389418 APLNQ9ULZ1 77 aa8.51□□□□□ -1.05
PTPRN2-203ENST00000389418 CNBPP62633 177 aaKnown RBP8.51□□□□□ -1.05
PTPRN2-203ENST00000389418 A8MWP4 228 aa8.5□□□□□ -1.05
PTPRN2-203ENST00000389418 C7orf65Q6ZTY9 151 aa8.48□□□□□ -1.05
PTPRN2-203ENST00000389418 RELNP78509 3460 aa8.47□□□□□ -1.05
PTPRN2-203ENST00000389418 C4orf26Q17RF5 130 aa8.47□□□□□ -1.05
PTPRN2-203ENST00000389418 C9orf129Q5T035 196 aaKnown RBP8.47□□□□□ -1.05
PTPRN2-203ENST00000389418 WDFY3Q8IZQ1 3526 aa8.47□□□□□ -1.05
PTPRN2-203ENST00000389418 LOC101927531A0A1B0GV80 90 aa8.46□□□□□ -1.05
PTPRN2-203ENST00000389418 PSPHP1O15172 72 aa8.46□□□□□ -1.06
PTPRN2-203ENST00000389418 ATP11AUNQ6ZP68 121 aa8.44□□□□□ -1.06
PTPRN2-203ENST00000389418 MRPL34Q9BQ48 92 aaKnown RBP8.43□□□□□ -1.06
PTPRN2-203ENST00000389418 ERC2-IT1O76042 136 aa8.43□□□□□ -1.06
PTPRN2-203ENST00000389418 ASPMQ8IZT6 3477 aa8.42□□□□□ -1.06
PTPRN2-203ENST00000389418 IGFL1Q6UW32 110 aa8.42□□□□□ -1.06
PTPRN2-203ENST00000389418 J3QL48 77 aa8.42□□□□□ -1.06
PTPRN2-203ENST00000389418 Q96NJ1 140 aa8.41□□□□□ -1.06
PTPRN2-203ENST00000389418 LINC00304Q8N9R0 145 aa8.41□□□□□ -1.06
PTPRN2-203ENST00000389418 Q8N377 158 aa8.41□□□□□ -1.06
PTPRN2-203ENST00000389418 IGLV5-37A0A075B6J1 123 aa8.4□□□□□ -1.06
PTPRN2-203ENST00000389418 TENM3Q9P273 2699 aa8.39□□□□□ -1.07
PTPRN2-203ENST00000389418 A0A1B0GU69 56 aa8.39□□□□□ -1.07
PTPRN2-203ENST00000389418 IGLV7-43P04211 117 aa8.39□□□□□ -1.07
PTPRN2-203ENST00000389418 TNP2Q05952 138 aa8.39□□□□□ -1.07
PTPRN2-203ENST00000389418 PKD1L1Q8TDX9 2849 aa8.39□□□□□ -1.07
PTPRN2-203ENST00000389418 PRR15Q8IV56 129 aa8.38□□□□□ -1.07
PTPRN2-203ENST00000389418 LAMA5O15230 3695 aa8.37□□□□□ -1.07
PTPRN2-203ENST00000389418 K7EQZ3 153 aa8.37□□□□□ -1.07
PTPRN2-203ENST00000389418 FAM104AQ969W3 186 aa8.36□□□□□ -1.07
PTPRN2-203ENST00000389418 PSORS1C2Q9UIG4 136 aa8.35□□□□□ -1.07
PTPRN2-203ENST00000389418 C8orf17Q9NRJ1 99 aa8.34□□□□□ -1.07
PTPRN2-203ENST00000389418 A0A1B0GVX0 72 aa8.34□□□□□ -1.07
PTPRN2-203ENST00000389418 SPRR4Q96PI1 79 aa8.34□□□□□ -1.07
PTPRN2-203ENST00000389418 C9orf92A6NGG3 77 aa8.3□□□□□ -1.08
PTPRN2-203ENST00000389418 IGLV5-48A0A075B6I7 105 aa8.28□□□□□ -1.08
PTPRN2-203ENST00000389418 HRNRQ86YZ3 2850 aaPredicted RBP8.28□□□□□ -1.08
PTPRN2-203ENST00000389418 A0A1W2PNM2 257 aa8.25□□□□□ -1.09
PTPRN2-203ENST00000389418 DSCR10P59022 87 aa8.25□□□□□ -1.09
PTPRN2-203ENST00000389418 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.25□□□□□ -1.09
PTPRN2-203ENST00000389418 CD164Q04900 197 aa8.24□□□□□ -1.09
PTPRN2-203ENST00000389418 KLKP1Q107X0 134 aa8.23□□□□□ -1.09
PTPRN2-203ENST00000389418 OBSCN-AS1Q96MR7 158 aa8.23□□□□□ -1.09
PTPRN2-203ENST00000389418 TENM1Q9UKZ4 2725 aa8.22□□□□□ -1.09
PTPRN2-203ENST00000389418 IGLV8-61A0A075B6I0 122 aa8.22□□□□□ -1.09
PTPRN2-203ENST00000389418 LINC01600Q96MT4 127 aa8.21□□□□□ -1.09
PTPRN2-203ENST00000389418 KRTAP1-5Q9BYS1 174 aa8.19□□□□□ -1.1
PTPRN2-203ENST00000389418 COX6B2Q6YFQ2 88 aa8.18□□□□□ -1.1
PTPRN2-203ENST00000389418 MXRA5Q9NR99 2828 aa8.18□□□□□ -1.1
PTPRN2-203ENST00000389418 CELSR1Q9NYQ6 3014 aa8.18□□□□□ -1.1
PTPRN2-203ENST00000389418 FAM229BQ4G0N7 80 aa8.18□□□□□ -1.1
PTPRN2-203ENST00000389418 VWFP04275 2813 aa8.18□□□□□ -1.1
PTPRN2-203ENST00000389418 COA5Q86WW8 74 aa8.17□□□□□ -1.1
PTPRN2-203ENST00000389418 CYP4F30PQ9H0H9 118 aa8.17□□□□□ -1.1
PTPRN2-203ENST00000389418 H7BZZ5 65 aa8.16□□□□□ -1.1
PTPRN2-203ENST00000389418 FBN1P35555 2871 aaKnown RBP8.15□□□□□ -1.11
PTPRN2-203ENST00000389418 Q8NDZ9 215 aa8.14□□□□□ -1.11
PTPRN2-203ENST00000389418 PLAC8Q9NZF1 115 aa8.14□□□□□ -1.11
PTPRN2-203ENST00000389418 ZFHX4Q86UP3 3567 aa8.13□□□□□ -1.11
PTPRN2-203ENST00000389418 RBM12B-AS1Q9P1G2 102 aa8.13□□□□□ -1.11
PTPRN2-203ENST00000389418 DMDP11532 3685 aa8.13□□□□□ -1.11
PTPRN2-203ENST00000389418 PRR26Q8N8Z3 221 aa8.12□□□□□ -1.11
PTPRN2-203ENST00000389418 SRRM2Q9UQ35 2752 aaKnown RBP8.12□□□□□ -1.11
PTPRN2-203ENST00000389418 UQCR11O14957 56 aa8.12□□□□□ -1.11
PTPRN2-203ENST00000389418 SPRR1AP35321 89 aa8.1□□□□□ -1.11
PTPRN2-203ENST00000389418 SPANXA2-OT1Q8N9U9 137 aa8.1□□□□□ -1.11
PTPRN2-203ENST00000389418 A8MUN3 132 aa8.1□□□□□ -1.11
PTPRN2-203ENST00000389418 TENM2Q9NT68 2774 aa8.09□□□□□ -1.11
PTPRN2-203ENST00000389418 ZFHX3Q15911 3703 aa8.05□□□□□ -1.12
PTPRN2-203ENST00000389418 SPRR1BP22528 89 aa8.04□□□□□ -1.12
PTPRN2-203ENST00000389418 CUBNO60494 3623 aa8.03□□□□□ -1.12
PTPRN2-203ENST00000389418 KRTAP10-2P60368 255 aa8.01□□□□□ -1.13
PTPRN2-203ENST00000389418 IGLV7-46A0A075B6I9 117 aa8□□□□□ -1.13
PTPRN2-203ENST00000389418 KRTAP26-1Q6PEX3 210 aa7.99□□□□□ -1.13
PTPRN2-203ENST00000389418 OCR1Q9BZK8 76 aa7.99□□□□□ -1.13
PTPRN2-203ENST00000389418 PDZD2O15018 2839 aa7.98□□□□□ -1.13
PTPRN2-203ENST00000389418 Q8N1X5 172 aa7.98□□□□□ -1.13
PTPRN2-203ENST00000389418 SMG1Q96Q15 3661 aaKnown RBP7.98□□□□□ -1.13
PTPRN2-203ENST00000389418 LCE6AA0A183 80 aa7.97□□□□□ -1.13
PTPRN2-203ENST00000389418 MIR22HGQ0VDD5 57 aa7.96□□□□□ -1.13
PTPRN2-203ENST00000389418 Q6ZSA8 131 aa7.96□□□□□ -1.13
PTPRN2-203ENST00000389418 PANO1I0J062 215 aa7.95□□□□□ -1.14
PTPRN2-203ENST00000389418 KRTAP10-1P60331 282 aa7.95□□□□□ -1.14
PTPRN2-203ENST00000389418 TGP01266 2768 aa7.91□□□□□ -1.14
PTPRN2-203ENST00000389418 OTOGQ6ZRI0 2925 aa7.91□□□□□ -1.14
PTPRN2-203ENST00000389418 LINC01554Q52M75 96 aa7.9□□□□□ -1.14
PTPRN2-203ENST00000389418 KTN1-AS1Q86SY8 53 aa7.9□□□□□ -1.14
PTPRN2-203ENST00000389418 MMP24-AS1A0A0U1RRL7 71 aa7.88□□□□□ -1.15
PTPRN2-203ENST00000389418 Q5XG85 94 aa7.87□□□□□ -1.15
PTPRN2-203ENST00000389418 CRIPTQ9P021 101 aa7.87□□□□□ -1.15
PTPRN2-203ENST00000389418 ZCCHC13Q8WW36 166 aaKnown RBP7.87□□□□□ -1.15
PTPRN2-203ENST00000389418 LINC00472Q9H8W2 130 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms