RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 SMIM29Q86T20 159 aa8.41□□□□□ -1.06
PTPRN2-202ENST00000389416 PMAIP1Q13794 54 aa8.41□□□□□ -1.06
PTPRN2-202ENST00000389416 H0Y9P7 68 aa8.41□□□□□ -1.06
PTPRN2-202ENST00000389416 A0A1B0GW54 56 aa8.39□□□□□ -1.07
PTPRN2-202ENST00000389416 TRBV7-4A0A0J9YYF1 115 aa8.38□□□□□ -1.07
PTPRN2-202ENST00000389416 hDV103S1A0JD37 113 aa8.38□□□□□ -1.07
PTPRN2-202ENST00000389416 IGFL1Q6UW32 110 aa8.38□□□□□ -1.07
PTPRN2-202ENST00000389416 TMEM254Q8TBM7 123 aa8.38□□□□□ -1.07
PTPRN2-202ENST00000389416 MXRA5Q9NR99 2828 aa8.37□□□□□ -1.07
PTPRN2-202ENST00000389416 KRTAP1-5Q9BYS1 174 aa8.37□□□□□ -1.07
PTPRN2-202ENST00000389416 IGKV2D-30A0A075B6S6 120 aa8.37□□□□□ -1.07
PTPRN2-202ENST00000389416 IGKV2-30P06310 120 aa8.37□□□□□ -1.07
PTPRN2-202ENST00000389416 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.36□□□□□ -1.07
PTPRN2-202ENST00000389416 IGLV7-43P04211 117 aa8.36□□□□□ -1.07
PTPRN2-202ENST00000389416 C4orf26Q17RF5 130 aa8.34□□□□□ -1.07
PTPRN2-202ENST00000389416 C1orf64Q8NEQ6 169 aa8.32□□□□□ -1.08
PTPRN2-202ENST00000389416 LINC00313P59037 77 aa8.31□□□□□ -1.08
PTPRN2-202ENST00000389416 SSBP3-AS1Q7Z2R9 100 aa8.3□□□□□ -1.08
PTPRN2-202ENST00000389416 IGLV5-37A0A075B6J1 123 aa8.3□□□□□ -1.08
PTPRN2-202ENST00000389416 J3QL48 77 aa8.3□□□□□ -1.08
PTPRN2-202ENST00000389416 SPINK1P00995 79 aa8.3□□□□□ -1.08
PTPRN2-202ENST00000389416 K7EQZ3 153 aa8.29□□□□□ -1.08
PTPRN2-202ENST00000389416 SPRR4Q96PI1 79 aa8.29□□□□□ -1.08
PTPRN2-202ENST00000389416 Q8NDZ9 215 aa8.28□□□□□ -1.08
PTPRN2-202ENST00000389416 PSPHP1O15172 72 aa8.27□□□□□ -1.08
PTPRN2-202ENST00000389416 LINC00304Q8N9R0 145 aa8.27□□□□□ -1.08
PTPRN2-202ENST00000389416 Q96NJ1 140 aa8.26□□□□□ -1.09
PTPRN2-202ENST00000389416 A8MWP4 228 aa8.26□□□□□ -1.09
PTPRN2-202ENST00000389416 PRR15LQ9BU68 103 aa8.25□□□□□ -1.09
PTPRN2-202ENST00000389416 TP53AIP1Q9HCN2 124 aa8.25□□□□□ -1.09
PTPRN2-202ENST00000389416 A0A1W2PNM2 257 aa8.24□□□□□ -1.09
PTPRN2-202ENST00000389416 KRTAP26-1Q6PEX3 210 aa8.24□□□□□ -1.09
PTPRN2-202ENST00000389416 ZFHX4Q86UP3 3567 aa8.22□□□□□ -1.09
PTPRN2-202ENST00000389416 TRAV22A0A0B4J277 110 aa8.21□□□□□ -1.09
PTPRN2-202ENST00000389416 DMBT1Q9UGM3 2413 aaPredicted RBP8.21□□□□□ -1.1
PTPRN2-202ENST00000389416 DSCR10P59022 87 aa8.2□□□□□ -1.1
PTPRN2-202ENST00000389416 SPAG11AQ6PDA7 123 aa8.19□□□□□ -1.1
PTPRN2-202ENST00000389416 PRR15Q8IV56 129 aa8.18□□□□□ -1.1
PTPRN2-202ENST00000389416 MRPL34Q9BQ48 92 aaKnown RBP8.18□□□□□ -1.1
PTPRN2-202ENST00000389416 IGLV5-48A0A075B6I7 105 aa8.17□□□□□ -1.1
PTPRN2-202ENST00000389416 OBSCN-AS1Q96MR7 158 aa8.17□□□□□ -1.1
PTPRN2-202ENST00000389416 C9orf92A6NGG3 77 aa8.17□□□□□ -1.1
PTPRN2-202ENST00000389416 C8orf87E5RJ46 101 aa8.16□□□□□ -1.1
PTPRN2-202ENST00000389416 PLAC8Q9NZF1 115 aa8.16□□□□□ -1.1
PTPRN2-202ENST00000389416 C8orf17Q9NRJ1 99 aa8.16□□□□□ -1.1
PTPRN2-202ENST00000389416 LCE6AA0A183 80 aa8.15□□□□□ -1.11
PTPRN2-202ENST00000389416 ATP11AUNQ6ZP68 121 aa8.15□□□□□ -1.11
PTPRN2-202ENST00000389416 K7ERS5 55 aa8.14□□□□□ -1.11
PTPRN2-202ENST00000389416 C7orf65Q6ZTY9 151 aa8.14□□□□□ -1.11
PTPRN2-202ENST00000389416 A0A1B0GVX0 72 aa8.14□□□□□ -1.11
PTPRN2-202ENST00000389416 KRTAP10-2P60368 255 aa8.14□□□□□ -1.11
PTPRN2-202ENST00000389416 PRR26Q8N8Z3 221 aa8.13□□□□□ -1.11
PTPRN2-202ENST00000389416 SPRR1AP35321 89 aa8.12□□□□□ -1.11
PTPRN2-202ENST00000389416 SMG1Q96Q15 3661 aaKnown RBP8.11□□□□□ -1.11
PTPRN2-202ENST00000389416 CELSR1Q9NYQ6 3014 aa8.11□□□□□ -1.11
PTPRN2-202ENST00000389416 KRTAP10-1P60331 282 aa8.1□□□□□ -1.11
PTPRN2-202ENST00000389416 TENM1Q9UKZ4 2725 aa8.09□□□□□ -1.11
PTPRN2-202ENST00000389416 OTOGQ6ZRI0 2925 aa8.09□□□□□ -1.11
PTPRN2-202ENST00000389416 Q6ZR54 194 aa8.09□□□□□ -1.11
PTPRN2-202ENST00000389416 PDZD2O15018 2839 aa8.08□□□□□ -1.12
PTPRN2-202ENST00000389416 H3BPC8 53 aa8.08□□□□□ -1.12
PTPRN2-202ENST00000389416 PANO1I0J062 215 aa8.08□□□□□ -1.12
PTPRN2-202ENST00000389416 LOC101927531A0A1B0GV80 90 aa8.05□□□□□ -1.12
PTPRN2-202ENST00000389416 ACYP2P14621 99 aa8.05□□□□□ -1.12
PTPRN2-202ENST00000389416 PKD1L1Q8TDX9 2849 aa8.05□□□□□ -1.12
PTPRN2-202ENST00000389416 TENM3Q9P273 2699 aa8.04□□□□□ -1.12
PTPRN2-202ENST00000389416 FBN1P35555 2871 aaKnown RBP8.03□□□□□ -1.12
PTPRN2-202ENST00000389416 LINC01600Q96MT4 127 aa8.01□□□□□ -1.13
PTPRN2-202ENST00000389416 KRTAP21-3Q3LHN1 58 aa8□□□□□ -1.13
PTPRN2-202ENST00000389416 FLG2Q5D862 2391 aaPredicted RBP8□□□□□ -1.13
PTPRN2-202ENST00000389416 FAM229BQ4G0N7 80 aa7.99□□□□□ -1.13
PTPRN2-202ENST00000389416 KLKP1Q107X0 134 aa7.98□□□□□ -1.13
PTPRN2-202ENST00000389416 ZFHX3Q15911 3703 aa7.98□□□□□ -1.13
PTPRN2-202ENST00000389416 CD164Q04900 197 aa7.97□□□□□ -1.13
PTPRN2-202ENST00000389416 NBPF19A0A087WUL8 3843 aa7.96□□□□□ -1.14
PTPRN2-202ENST00000389416 Q6ZRN7 208 aaPredicted RBP7.96□□□□□ -1.14
PTPRN2-202ENST00000389416 SPRR1BP22528 89 aa7.95□□□□□ -1.14
PTPRN2-202ENST00000389416 H7BZZ5 65 aa7.94□□□□□ -1.14
PTPRN2-202ENST00000389416 COX6B2Q6YFQ2 88 aa7.94□□□□□ -1.14
PTPRN2-202ENST00000389416 VWFP04275 2813 aa7.93□□□□□ -1.14
PTPRN2-202ENST00000389416 A0A1B0GU69 56 aa7.93□□□□□ -1.14
PTPRN2-202ENST00000389416 Q5VSD8 79 aa7.93□□□□□ -1.14
PTPRN2-202ENST00000389416 TENM2Q9NT68 2774 aa7.92□□□□□ -1.14
PTPRN2-202ENST00000389416 IGLV7-46A0A075B6I9 117 aa7.92□□□□□ -1.14
PTPRN2-202ENST00000389416 A8MUN3 132 aa7.91□□□□□ -1.14
PTPRN2-202ENST00000389416 KRTAP4-16G5E9R7 235 aaPredicted RBP7.9□□□□□ -1.14
PTPRN2-202ENST00000389416 IGLV8-61A0A075B6I0 122 aa7.89□□□□□ -1.15
PTPRN2-202ENST00000389416 CYP4F30PQ9H0H9 118 aa7.88□□□□□ -1.15
PTPRN2-202ENST00000389416 KRTAP11-1Q8IUC1 163 aa7.87□□□□□ -1.15
PTPRN2-202ENST00000389416 COA5Q86WW8 74 aa7.86□□□□□ -1.15
PTPRN2-202ENST00000389416 Q8N1X5 172 aa7.84□□□□□ -1.15
PTPRN2-202ENST00000389416 OCR1Q9BZK8 76 aa7.84□□□□□ -1.15
PTPRN2-202ENST00000389416 CSMD2Q7Z408 3487 aa7.84□□□□□ -1.15
PTPRN2-202ENST00000389416 KRTAP7-1Q8IUC3 87 aa7.84□□□□□ -1.16
PTPRN2-202ENST00000389416 CSMD1Q96PZ7 3565 aa7.83□□□□□ -1.16
PTPRN2-202ENST00000389416 LINC00472Q9H8W2 130 aa7.83□□□□□ -1.16
PTPRN2-202ENST00000389416 KTN1-AS1Q86SY8 53 aa7.82□□□□□ -1.16
PTPRN2-202ENST00000389416 MMP24-AS1A0A0U1RRL7 71 aa7.81□□□□□ -1.16
PTPRN2-202ENST00000389416 A0A087X002 238 aa7.8□□□□□ -1.16
PTPRN2-202ENST00000389416 SVEP1Q4LDE5 3571 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms