RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 KPRPQ5T749 579 aaPredicted RBP3.83□□□□□ -1.8
RFC1-202ENST00000381897 H0Y9P7 68 aa3.83□□□□□ -1.8
RFC1-202ENST00000381897 CSAG1Q6PB30 78 aa3.83□□□□□ -1.8
RFC1-202ENST00000381897 KRTAP10-9P60411 292 aa3.82□□□□□ -1.8
RFC1-202ENST00000381897 TEX15Q9BXT5 2789 aa3.82□□□□□ -1.8
RFC1-202ENST00000381897 KRTAP25-1Q3LHN0 102 aa3.81□□□□□ -1.8
RFC1-202ENST00000381897 NF1P21359 2839 aa3.81□□□□□ -1.8
RFC1-202ENST00000381897 LINC00588Q9Y4M8 146 aa3.81□□□□□ -1.8
RFC1-202ENST00000381897 TRAV22A0A0B4J277 110 aa3.8□□□□□ -1.8
RFC1-202ENST00000381897 DNAH10OSP0CZ25 163 aa3.8□□□□□ -1.8
RFC1-202ENST00000381897 KRTAP24-1Q3LI83 254 aa3.8□□□□□ -1.8
RFC1-202ENST00000381897 WFDC10BQ8IUB3 73 aa3.8□□□□□ -1.8
RFC1-202ENST00000381897 FN1P02751 2386 aaKnown RBP3.8□□□□□ -1.8
RFC1-202ENST00000381897 WFDC13Q8IUB5 93 aa3.8□□□□□ -1.8
RFC1-202ENST00000381897 CHD6Q8TD26 2715 aa3.8□□□□□ -1.8
RFC1-202ENST00000381897 DEFB131BA0A096LNP1 70 aa3.79□□□□□ -1.8
RFC1-202ENST00000381897 A0A096LNT2 108 aa3.79□□□□□ -1.8
RFC1-202ENST00000381897 IGLV1-51P01701 117 aa3.79□□□□□ -1.8
RFC1-202ENST00000381897 NIPBLQ6KC79 2804 aaeCLIP3.79□□□□□ -1.84e-6■■■■□ 20.9
RFC1-202ENST00000381897 Q8N377 158 aa3.78□□□□□ -1.8
RFC1-202ENST00000381897 DEFB135Q30KP9 77 aa3.78□□□□□ -1.8
RFC1-202ENST00000381897 PHF5AQ7RTV0 110 aaKnown RBP3.78□□□□□ -1.8
RFC1-202ENST00000381897 MXRA5Q9NR99 2828 aa3.78□□□□□ -1.8
RFC1-202ENST00000381897 NBPF19A0A087WUL8 3843 aa3.77□□□□□ -1.81
RFC1-202ENST00000381897 C6orf48Q9UBA6 75 aa3.77□□□□□ -1.81
RFC1-202ENST00000381897 M0R2N4 97 aa3.77□□□□□ -1.81
RFC1-202ENST00000381897 SPANXA2-OT1Q8N9U9 137 aa3.77□□□□□ -1.81
RFC1-202ENST00000381897 HECTD1Q9ULT8 2610 aa3.76□□□□□ -1.81
RFC1-202ENST00000381897 NBEAL2Q6ZNJ1 2754 aa3.76□□□□□ -1.81
RFC1-202ENST00000381897 FLNAP21333 2647 aaKnown RBP3.76□□□□□ -1.81
RFC1-202ENST00000381897 Q8NAQ8 132 aa3.75□□□□□ -1.81
RFC1-202ENST00000381897 ADM2Q7Z4H4 148 aa3.75□□□□□ -1.81
RFC1-202ENST00000381897 LINC00612Q8N6U2 182 aa3.74□□□□□ -1.81
RFC1-202ENST00000381897 USP24Q9UPU5 2620 aa3.74□□□□□ -1.81
RFC1-202ENST00000381897 A0A1B0GVX0 72 aa3.74□□□□□ -1.81
RFC1-202ENST00000381897 DEFB4AO15263 64 aa3.74□□□□□ -1.81
RFC1-202ENST00000381897 ITPR3Q14573 2671 aa3.74□□□□□ -1.81
RFC1-202ENST00000381897 Q6ZRX8 168 aa3.73□□□□□ -1.81
RFC1-202ENST00000381897 NOTCH2NLQ7Z3S9 236 aa3.73□□□□□ -1.81
RFC1-202ENST00000381897 TP53AIP1Q9HCN2 124 aa3.73□□□□□ -1.81
RFC1-202ENST00000381897 ZNF469Q96JG9 3925 aaPredicted RBP3.73□□□□□ -1.81
RFC1-202ENST00000381897 IGLV5-48A0A075B6I7 105 aa3.73□□□□□ -1.81
RFC1-202ENST00000381897 KCNQ1DNQ9H478 68 aa3.73□□□□□ -1.81
RFC1-202ENST00000381897 FAM168BA1KXE4 195 aa3.73□□□□□ -1.81
RFC1-202ENST00000381897 AKAP9Q99996 3911 aa3.72□□□□□ -1.81
RFC1-202ENST00000381897 K7EQZ3 153 aa3.72□□□□□ -1.81
RFC1-202ENST00000381897 C16orf90A8MZG2 172 aa3.72□□□□□ -1.81
RFC1-202ENST00000381897 ASB16-AS1Q495Z4 193 aa3.71□□□□□ -1.81
RFC1-202ENST00000381897 PRR34Q9NV39 138 aa3.71□□□□□ -1.81
RFC1-202ENST00000381897 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.71□□□□□ -1.81
RFC1-202ENST00000381897 BAHCC1Q9P281 2608 aa3.71□□□□□ -1.82
RFC1-202ENST00000381897 A0A087WSZ3 146 aa3.71□□□□□ -1.82
RFC1-202ENST00000381897 GCN1Q92616 2671 aaKnown RBP3.71□□□□□ -1.82
RFC1-202ENST00000381897 GIG44P09565 113 aaPredicted RBP3.71□□□□□ -1.82
RFC1-202ENST00000381897 CASC10Q5T4H9 136 aa3.71□□□□□ -1.82
RFC1-202ENST00000381897 H3BNG1 76 aa3.69□□□□□ -1.82
RFC1-202ENST00000381897 ITPR2Q14571 2701 aa3.69□□□□□ -1.82
RFC1-202ENST00000381897 SPRR4Q96PI1 79 aa3.69□□□□□ -1.82
RFC1-202ENST00000381897 Q5VV11 94 aa3.69□□□□□ -1.82
RFC1-202ENST00000381897 APCP25054 2843 aa3.68□□□□□ -1.82
RFC1-202ENST00000381897 LCE6AA0A183 80 aa3.68□□□□□ -1.82
RFC1-202ENST00000381897 A0A1W2PNM2 257 aa3.68□□□□□ -1.82
RFC1-202ENST00000381897 SETXQ7Z333 2677 aaKnown RBP3.68□□□□□ -1.82
RFC1-202ENST00000381897 ST20-AS1Q8NBB2 130 aa3.68□□□□□ -1.82
RFC1-202ENST00000381897 PCOTHQ58A44 107 aa3.67□□□□□ -1.82
RFC1-202ENST00000381897 Q8N9P0 234 aaPredicted RBP3.67□□□□□ -1.82
RFC1-202ENST00000381897 HELZ2Q9BYK8 2649 aaKnown RBP3.67□□□□□ -1.82
RFC1-202ENST00000381897 ZCCHC13Q8WW36 166 aaKnown RBP3.67□□□□□ -1.82
RFC1-202ENST00000381897 RTL8CO15255 209 aa3.67□□□□□ -1.82
RFC1-202ENST00000381897 DSCR10P59022 87 aa3.67□□□□□ -1.82
RFC1-202ENST00000381897 Q8NDZ9 215 aa3.67□□□□□ -1.82
RFC1-202ENST00000381897 SPINK7P58062 85 aa3.66□□□□□ -1.82
RFC1-202ENST00000381897 LINC01556Q5JQF7 62 aa3.66□□□□□ -1.82
RFC1-202ENST00000381897 C20orf166-AS1Q96NR2 134 aa3.66□□□□□ -1.82
RFC1-202ENST00000381897 UBR5O95071 2799 aaPredicted RBP3.66□□□□□ -1.82
RFC1-202ENST00000381897 ROMO1P60602 79 aa3.66□□□□□ -1.82
RFC1-202ENST00000381897 ATRQ13535 2644 aa3.64□□□□□ -1.83
RFC1-202ENST00000381897 IGFL1Q6UW32 110 aa3.64□□□□□ -1.83
RFC1-202ENST00000381897 LINC01558Q9Y6Z2 57 aa3.64□□□□□ -1.83
RFC1-202ENST00000381897 TENM4Q6N022 2769 aa3.64□□□□□ -1.83
RFC1-202ENST00000381897 C15orf56Q8N910 161 aa3.64□□□□□ -1.83
RFC1-202ENST00000381897 TEP1Q99973 2627 aaKnown RBP3.62□□□□□ -1.83
RFC1-202ENST00000381897 APLNQ9ULZ1 77 aa3.62□□□□□ -1.83
RFC1-202ENST00000381897 PRLHP81277 87 aa3.61□□□□□ -1.83
RFC1-202ENST00000381897 ZNF861PO60384 105 aa3.61□□□□□ -1.83
RFC1-202ENST00000381897 A0A096LNI7 61 aa3.6□□□□□ -1.83
RFC1-202ENST00000381897 R4GN34 69 aa3.6□□□□□ -1.83
RFC1-202ENST00000381897 HIVEP1P15822 2718 aa3.6□□□□□ -1.83
RFC1-202ENST00000381897 A8MUU9 505 aa3.6□□□□□ -1.83
RFC1-202ENST00000381897 VWFP04275 2813 aa3.6□□□□□ -1.83
RFC1-202ENST00000381897 MAST4O15021 2626 aa3.6□□□□□ -1.83
RFC1-202ENST00000381897 A0A0G2JQZ4 141 aa3.59□□□□□ -1.83
RFC1-202ENST00000381897 A6NN06 94 aa3.59□□□□□ -1.83
RFC1-202ENST00000381897 SPRR1AP35321 89 aa3.59□□□□□ -1.83
RFC1-202ENST00000381897 CR1P17927 2039 aa3.59□□□□□ -1.84
RFC1-202ENST00000381897 UNC79Q9P2D8 2635 aa3.58□□□□□ -1.84
RFC1-202ENST00000381897 SPINK1P00995 79 aa3.58□□□□□ -1.84
RFC1-202ENST00000381897 PP632Q6XCG6 107 aa3.58□□□□□ -1.84
RFC1-202ENST00000381897 MRPL34Q9BQ48 92 aaKnown RBP3.58□□□□□ -1.84
RFC1-202ENST00000381897 TRRAPQ9Y4A5 3859 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms