RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 IGKV2-30P06310 120 aa8.19□□□□□ -1.1
DNMT3A-204ENST00000380756 RTL8CO15255 209 aa8.19□□□□□ -1.1
DNMT3A-204ENST00000380756 ACYP2P14621 99 aa8.17□□□□□ -1.1
DNMT3A-204ENST00000380756 C9orf163Q8N9P6 203 aa8.17□□□□□ -1.1
DNMT3A-204ENST00000380756 IGLV5-37A0A075B6J1 123 aa8.16□□□□□ -1.1
DNMT3A-204ENST00000380756 COA5Q86WW8 74 aa8.15□□□□□ -1.1
DNMT3A-204ENST00000380756 MRPL34Q9BQ48 92 aaKnown RBP8.15□□□□□ -1.1
DNMT3A-204ENST00000380756 SPACA4Q8TDM5 124 aa8.15□□□□□ -1.11
DNMT3A-204ENST00000380756 A0A1B0GU69 56 aa8.13□□□□□ -1.11
DNMT3A-204ENST00000380756 UTP20O75691 2785 aaKnown RBP8.13□□□□□ -1.11
DNMT3A-204ENST00000380756 C8orf17Q9NRJ1 99 aa8.13□□□□□ -1.11
DNMT3A-204ENST00000380756 LOC101927531A0A1B0GV80 90 aa8.12□□□□□ -1.11
DNMT3A-204ENST00000380756 SPRR4Q96PI1 79 aa8.12□□□□□ -1.11
DNMT3A-204ENST00000380756 ASPMQ8IZT6 3477 aa8.12□□□□□ -1.11
DNMT3A-204ENST00000380756 DSCR10P59022 87 aa8.11□□□□□ -1.11
DNMT3A-204ENST00000380756 CNBPP62633 177 aaKnown RBP8.11□□□□□ -1.11
DNMT3A-204ENST00000380756 LINC00313P59037 77 aa8.11□□□□□ -1.11
DNMT3A-204ENST00000380756 ITPR2Q14571 2701 aa8.11□□□□□ -1.11
DNMT3A-204ENST00000380756 WIPF1O43516 503 aa8.1□□□□□ -1.11
DNMT3A-204ENST00000380756 CYP4F30PQ9H0H9 118 aa8.09□□□□□ -1.11
DNMT3A-204ENST00000380756 STAB2Q8WWQ8 2551 aa8.09□□□□□ -1.11
DNMT3A-204ENST00000380756 DCHS1Q96JQ0 3298 aa8.09□□□□□ -1.11
DNMT3A-204ENST00000380756 A0A1B0GVX0 72 aa8.08□□□□□ -1.12
DNMT3A-204ENST00000380756 FAM229AH3BQW9 127 aa8.08□□□□□ -1.12
DNMT3A-204ENST00000380756 C7orf65Q6ZTY9 151 aa8.07□□□□□ -1.12
DNMT3A-204ENST00000380756 ZNF861PO60384 105 aa8.06□□□□□ -1.12
DNMT3A-204ENST00000380756 HRNRQ86YZ3 2850 aaPredicted RBP8.06□□□□□ -1.12
DNMT3A-204ENST00000380756 CELSR2Q9HCU4 2923 aa8.05□□□□□ -1.12
DNMT3A-204ENST00000380756 C8orf87E5RJ46 101 aa8.05□□□□□ -1.12
DNMT3A-204ENST00000380756 SPRR1AP35321 89 aa8.04□□□□□ -1.12
DNMT3A-204ENST00000380756 SPANXA2-OT1Q8N9U9 137 aa8.04□□□□□ -1.12
DNMT3A-204ENST00000380756 ANAPC11Q9NYG5 84 aa8.04□□□□□ -1.12
DNMT3A-204ENST00000380756 Q5XG85 94 aa8.04□□□□□ -1.12
DNMT3A-204ENST00000380756 A0A087WTM6 91 aa8.03□□□□□ -1.12
DNMT3A-204ENST00000380756 NF1P21359 2839 aa8.02□□□□□ -1.12
DNMT3A-204ENST00000380756 LAMA5O15230 3695 aa8.02□□□□□ -1.13
DNMT3A-204ENST00000380756 APLNQ9ULZ1 77 aa8.02□□□□□ -1.13
DNMT3A-204ENST00000380756 KRTAP26-1Q6PEX3 210 aa8.01□□□□□ -1.13
DNMT3A-204ENST00000380756 PSORS1C2Q9UIG4 136 aa8.01□□□□□ -1.13
DNMT3A-204ENST00000380756 SSBP3-AS1Q7Z2R9 100 aa8.01□□□□□ -1.13
DNMT3A-204ENST00000380756 FP248Q71RG6 208 aaPredicted RBP8□□□□□ -1.13
DNMT3A-204ENST00000380756 NIPBLQ6KC79 2804 aaeCLIP8□□□□□ -1.13
DNMT3A-204ENST00000380756 FLG2Q5D862 2391 aaPredicted RBP8□□□□□ -1.13
DNMT3A-204ENST00000380756 ATP11AUNQ6ZP68 121 aa8□□□□□ -1.13
DNMT3A-204ENST00000380756 TYMSOSQ8TAI1 123 aa7.99□□□□□ -1.13
DNMT3A-204ENST00000380756 OXTP01178 125 aa7.99□□□□□ -1.13
DNMT3A-204ENST00000380756 KRTAP21-3Q3LHN1 58 aa7.98□□□□□ -1.13
DNMT3A-204ENST00000380756 FBN2P35556 2912 aa7.97□□□□□ -1.13
DNMT3A-204ENST00000380756 APCP25054 2843 aa7.97□□□□□ -1.13
DNMT3A-204ENST00000380756 IGLV8-61A0A075B6I0 122 aa7.96□□□□□ -1.13
DNMT3A-204ENST00000380756 Q1T7F1 81 aa7.96□□□□□ -1.13
DNMT3A-204ENST00000380756 HIVEP1P15822 2718 aa7.95□□□□□ -1.14
DNMT3A-204ENST00000380756 FAM229BQ4G0N7 80 aa7.95□□□□□ -1.14
DNMT3A-204ENST00000380756 Q96NJ1 140 aa7.95□□□□□ -1.14
DNMT3A-204ENST00000380756 J3QL48 77 aa7.94□□□□□ -1.14
DNMT3A-204ENST00000380756 ZFHX4Q86UP3 3567 aa7.94□□□□□ -1.14
DNMT3A-204ENST00000380756 PLA2G1BP04054 148 aaKnown RBP7.93□□□□□ -1.14
DNMT3A-204ENST00000380756 IGLV7-43P04211 117 aa7.93□□□□□ -1.14
DNMT3A-204ENST00000380756 DCHS2Q6V1P9 2916 aa7.92□□□□□ -1.14
DNMT3A-204ENST00000380756 UQCR11O14957 56 aa7.91□□□□□ -1.14
DNMT3A-204ENST00000380756 CRYBG3Q68DQ2 2970 aa7.9□□□□□ -1.15
DNMT3A-204ENST00000380756 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.9□□□□□ -1.15
DNMT3A-204ENST00000380756 TNP2Q05952 138 aa7.89□□□□□ -1.15
DNMT3A-204ENST00000380756 IGLV7-46A0A075B6I9 117 aa7.88□□□□□ -1.15
DNMT3A-204ENST00000380756 MMP24-AS1A0A0U1RRL7 71 aa7.87□□□□□ -1.15
DNMT3A-204ENST00000380756 PRR26Q8N8Z3 221 aa7.87□□□□□ -1.15
DNMT3A-204ENST00000380756 SPRR1BP22528 89 aa7.87□□□□□ -1.15
DNMT3A-204ENST00000380756 LINC00472Q9H8W2 130 aa7.86□□□□□ -1.15
DNMT3A-204ENST00000380756 KRTAP4-16G5E9R7 235 aaPredicted RBP7.85□□□□□ -1.15
DNMT3A-204ENST00000380756 KRTAP1-5Q9BYS1 174 aa7.85□□□□□ -1.15
DNMT3A-204ENST00000380756 RELNP78509 3460 aa7.85□□□□□ -1.15
DNMT3A-204ENST00000380756 KTN1-AS1Q86SY8 53 aa7.84□□□□□ -1.15
DNMT3A-204ENST00000380756 MXRA5Q9NR99 2828 aa7.84□□□□□ -1.15
DNMT3A-204ENST00000380756 Q8N9P0 234 aaPredicted RBP7.84□□□□□ -1.16
DNMT3A-204ENST00000380756 CDC42SE1Q9NRR8 79 aa7.84□□□□□ -1.16
DNMT3A-204ENST00000380756 CD164Q04900 197 aa7.83□□□□□ -1.16
DNMT3A-204ENST00000380756 MIR22HGQ0VDD5 57 aa7.83□□□□□ -1.16
DNMT3A-204ENST00000380756 KMT2BQ9UMN6 2715 aaPredicted RBP7.83□□□□□ -1.16
DNMT3A-204ENST00000380756 DMBT1Q9UGM3 2413 aaPredicted RBP7.81□□□□□ -1.16
DNMT3A-204ENST00000380756 LINC00304Q8N9R0 145 aa7.79□□□□□ -1.16
DNMT3A-204ENST00000380756 SMR3BP02814 79 aaPredicted RBP7.79□□□□□ -1.16
DNMT3A-204ENST00000380756 Q75L30 129 aa7.76□□□□□ -1.17
DNMT3A-204ENST00000380756 TENM4Q6N022 2769 aa7.75□□□□□ -1.17
DNMT3A-204ENST00000380756 Q5VV11 94 aa7.74□□□□□ -1.17
DNMT3A-204ENST00000380756 HRES1P13985 223 aa7.74□□□□□ -1.17
DNMT3A-204ENST00000380756 PLAC8Q9NZF1 115 aa7.73□□□□□ -1.17
DNMT3A-204ENST00000380756 LINC01558Q9Y6Z2 57 aa7.73□□□□□ -1.17
DNMT3A-204ENST00000380756 C9orf92A6NGG3 77 aa7.72□□□□□ -1.17
DNMT3A-204ENST00000380756 Q8N1X5 172 aa7.71□□□□□ -1.17
DNMT3A-204ENST00000380756 ZCCHC13Q8WW36 166 aaKnown RBP7.71□□□□□ -1.17
DNMT3A-204ENST00000380756 LCA10Q71F78 164 aa7.71□□□□□ -1.18
DNMT3A-204ENST00000380756 CUBNO60494 3623 aa7.71□□□□□ -1.18
DNMT3A-204ENST00000380756 KRTAP29-1A8MX34 341 aaPredicted RBP7.71□□□□□ -1.18
DNMT3A-204ENST00000380756 SMG1Q96Q15 3661 aaKnown RBP7.7□□□□□ -1.18
DNMT3A-204ENST00000380756 LCE6AA0A183 80 aa7.69□□□□□ -1.18
DNMT3A-204ENST00000380756 KRTAP7-1Q8IUC3 87 aa7.66□□□□□ -1.18
DNMT3A-204ENST00000380756 PANO1I0J062 215 aa7.66□□□□□ -1.18
DNMT3A-204ENST00000380756 Q5W150 140 aa7.62□□□□□ -1.19
DNMT3A-204ENST00000380756 SPINK7P58062 85 aa7.6□□□□□ -1.19
DNMT3A-204ENST00000380756 LINC00483Q53H64 154 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms