RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 PYY3Q5JQD4 70 aa5.36□□□□□ -1.55
HMGN1-202ENST00000380747 SMIM11BQ8TCY0 68 aa5.36□□□□□ -1.55
HMGN1-202ENST00000380747 TRBV7-6A0A0J9YX20 115 aa5.35□□□□□ -1.55
HMGN1-202ENST00000380747 Q8NBF4 154 aa5.35□□□□□ -1.55
HMGN1-202ENST00000380747 TAL2Q16559 108 aa5.34□□□□□ -1.55
HMGN1-202ENST00000380747 C9orf153Q5TBE3 101 aa5.34□□□□□ -1.55
HMGN1-202ENST00000380747 C2orf91Q6ZV80 131 aa5.34□□□□□ -1.55
HMGN1-202ENST00000380747 DEFB105AQ8NG35 78 aa5.34□□□□□ -1.55
HMGN1-202ENST00000380747 HIGD1BQ9P298 99 aa5.34□□□□□ -1.55
HMGN1-202ENST00000380747 A0A0U1RQV1 116 aa5.33□□□□□ -1.56
HMGN1-202ENST00000380747 VAMP3Q15836 100 aa5.33□□□□□ -1.56
HMGN1-202ENST00000380747 SPAG11AQ6PDA7 123 aa5.33□□□□□ -1.56
HMGN1-202ENST00000380747 H7C2G1 150 aa5.32□□□□□ -1.56
HMGN1-202ENST00000380747 SPRR1BP22528 89 aa5.32□□□□□ -1.56
HMGN1-202ENST00000380747 SSBP3-AS1Q7Z2R9 100 aa5.32□□□□□ -1.56
HMGN1-202ENST00000380747 RAB37Q96AX2 223 aa5.32□□□□□ -1.56
HMGN1-202ENST00000380747 RETNLBQ9BQ08 111 aa5.32□□□□□ -1.56
HMGN1-202ENST00000380747 NHP2Q9NX24 153 aaKnown RBP5.32□□□□□ -1.56
HMGN1-202ENST00000380747 SLC25A20O43772 301 aa5.31□□□□□ -1.56
HMGN1-202ENST00000380747 LAMTOR3Q9UHA4 124 aa5.31□□□□□ -1.56
HMGN1-202ENST00000380747 TEX49A0A1B0GTD5 131 aa5.3□□□□□ -1.56
HMGN1-202ENST00000380747 CFC1BP0CG36 223 aa5.3□□□□□ -1.56
HMGN1-202ENST00000380747 CFC1P0CG37 223 aa5.3□□□□□ -1.56
HMGN1-202ENST00000380747 CTAG1AP78358 180 aa5.3□□□□□ -1.56
HMGN1-202ENST00000380747 Q1RN00 199 aa5.3□□□□□ -1.56
HMGN1-202ENST00000380747 CEND1Q8N111 149 aa5.3□□□□□ -1.56
HMGN1-202ENST00000380747 A0A0B4J2C4 111 aa5.29□□□□□ -1.56
HMGN1-202ENST00000380747 SPINK1P00995 79 aa5.29□□□□□ -1.56
HMGN1-202ENST00000380747 LINC00575Q6W349 94 aa5.29□□□□□ -1.56
HMGN1-202ENST00000380747 IGLV5-48A0A075B6I7 105 aa5.27□□□□□ -1.57
HMGN1-202ENST00000380747 hADV29S1A0JD25 119 aa5.27□□□□□ -1.57
HMGN1-202ENST00000380747 FXYD2P54710 66 aa5.27□□□□□ -1.57
HMGN1-202ENST00000380747 LINC01547P58512 204 aaPredicted RBP5.27□□□□□ -1.57
HMGN1-202ENST00000380747 HSD52Q0P140 79 aa5.27□□□□□ -1.57
HMGN1-202ENST00000380747 BVES-AS1Q5T3Y7 98 aa5.27□□□□□ -1.57
HMGN1-202ENST00000380747 UQCR10Q9UDW1 63 aa5.27□□□□□ -1.57
HMGN1-202ENST00000380747 IGLV7-46A0A075B6I9 117 aa5.26□□□□□ -1.57
HMGN1-202ENST00000380747 HRCT1Q6UXD1 115 aa5.26□□□□□ -1.57
HMGN1-202ENST00000380747 Q6ZQY7 126 aa5.26□□□□□ -1.57
HMGN1-202ENST00000380747 SMIM29Q86T20 159 aa5.26□□□□□ -1.57
HMGN1-202ENST00000380747 Q8N377 158 aa5.26□□□□□ -1.57
HMGN1-202ENST00000380747 PRO1854Q9UHT4 67 aa5.26□□□□□ -1.57
HMGN1-202ENST00000380747 PRO1933Q9H354 126 aa5.25□□□□□ -1.57
HMGN1-202ENST00000380747 RPS29P62273 56 aaKnown RBP5.24□□□□□ -1.57
HMGN1-202ENST00000380747 F8WEM9 126 aa5.23□□□□□ -1.57
HMGN1-202ENST00000380747 H0YGX0 51 aa5.23□□□□□ -1.57
HMGN1-202ENST00000380747 SNCGO76070 127 aa5.23□□□□□ -1.57
HMGN1-202ENST00000380747 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.23□□□□□ -1.57
HMGN1-202ENST00000380747 MUC17Q685J3 4493 aa5.23□□□□□ -1.57
HMGN1-202ENST00000380747 A0A0G2JQZ4 141 aa5.22□□□□□ -1.57
HMGN1-202ENST00000380747 K7ERJ3 54 aa5.22□□□□□ -1.57
HMGN1-202ENST00000380747 FP248Q71RG6 208 aaPredicted RBP5.22□□□□□ -1.57
HMGN1-202ENST00000380747 MPLKIPQ8TAP9 179 aa5.22□□□□□ -1.57
HMGN1-202ENST00000380747 PSMB2P49721 201 aa5.21□□□□□ -1.58
HMGN1-202ENST00000380747 FAM218AQ96MZ4 157 aa5.21□□□□□ -1.58
HMGN1-202ENST00000380747 LIMD2Q9BT23 127 aa5.21□□□□□ -1.58
HMGN1-202ENST00000380747 SMIM6P0DI80 62 aa5.2□□□□□ -1.58
HMGN1-202ENST00000380747 CD164Q04900 197 aa5.2□□□□□ -1.58
HMGN1-202ENST00000380747 TPRXLQ17RH7 258 aa5.2□□□□□ -1.58
HMGN1-202ENST00000380747 SNHG12Q9BXW3 62 aa5.2□□□□□ -1.58
HMGN1-202ENST00000380747 PPDPFLQ8WWR9 84 aa5.19□□□□□ -1.58
HMGN1-202ENST00000380747 OCIAD2Q56VL3 154 aa5.18□□□□□ -1.58
HMGN1-202ENST00000380747 KRTAP5-3Q6L8H2 238 aa5.18□□□□□ -1.58
HMGN1-202ENST00000380747 CLEC2BQ92478 149 aa5.18□□□□□ -1.58
HMGN1-202ENST00000380747 A0A1B0GX51 115 aa5.17□□□□□ -1.58
HMGN1-202ENST00000380747 COX6CP09669 75 aa5.17□□□□□ -1.58
HMGN1-202ENST00000380747 Q6JHZ5 121 aa5.17□□□□□ -1.58
HMGN1-202ENST00000380747 LOC105371267A0A1B0GV96 52 aa5.16□□□□□ -1.58
HMGN1-202ENST00000380747 FABP2P12104 132 aa5.16□□□□□ -1.58
HMGN1-202ENST00000380747 KRTAP13-3Q3SY46 172 aa5.16□□□□□ -1.58
HMGN1-202ENST00000380747 IGLV8-61A0A075B6I0 122 aa5.15□□□□□ -1.59
HMGN1-202ENST00000380747 H3BUT2 72 aa5.15□□□□□ -1.59
HMGN1-202ENST00000380747 M0R143 59 aa5.15□□□□□ -1.59
HMGN1-202ENST00000380747 DNAL4O96015 105 aa5.15□□□□□ -1.59
HMGN1-202ENST00000380747 IGFL1Q6UW32 110 aa5.15□□□□□ -1.59
HMGN1-202ENST00000380747 SCGB1C2P0DMR2 95 aa5.14□□□□□ -1.59
HMGN1-202ENST00000380747 NDUFV3P56181 108 aaKnown RBP5.14□□□□□ -1.59
HMGN1-202ENST00000380747 TSTD3H0UI37 97 aa5.13□□□□□ -1.59
HMGN1-202ENST00000380747 TCL1BO95988 128 aa5.13□□□□□ -1.59
HMGN1-202ENST00000380747 Q5XG85 94 aa5.13□□□□□ -1.59
HMGN1-202ENST00000380747 FSIP2Q5CZC0 6907 aa5.12□□□□□ -1.59
HMGN1-202ENST00000380747 TRBV7-7A0A0K0K1E9 115 aa5.12□□□□□ -1.59
HMGN1-202ENST00000380747 C1orf195Q5TG92 126 aa5.12□□□□□ -1.59
HMGN1-202ENST00000380747 ORMDL1Q9P0S3 153 aa5.12□□□□□ -1.59
HMGN1-202ENST00000380747 A0A1B0GV72 72 aa5.11□□□□□ -1.59
HMGN1-202ENST00000380747 H3BMG7 143 aa5.11□□□□□ -1.59
HMGN1-202ENST00000380747 H3BQ85 93 aa5.1□□□□□ -1.59
HMGN1-202ENST00000380747 BATFQ16520 125 aa5.1□□□□□ -1.59
HMGN1-202ENST00000380747 NAA38Q9BRA0 125 aaKnown RBP5.1□□□□□ -1.59
HMGN1-202ENST00000380747 C9orf92A6NGG3 77 aa5.09□□□□□ -1.59
HMGN1-202ENST00000380747 TRACP01848 142 aa5.09□□□□□ -1.59
HMGN1-202ENST00000380747 TMEM256-PLSCR3K7ERE1 68 aa5.08□□□□□ -1.6
HMGN1-202ENST00000380747 LST1O00453 97 aa5.08□□□□□ -1.6
HMGN1-202ENST00000380747 CRCT1Q9UGL9 99 aa5.08□□□□□ -1.6
HMGN1-202ENST00000380747 ASB16-AS1Q495Z4 193 aa5.07□□□□□ -1.6
HMGN1-202ENST00000380747 TEN1Q86WV5 123 aa5.07□□□□□ -1.6
HMGN1-202ENST00000380747 ANKRD29Q8N6D5 301 aa5.07□□□□□ -1.6
HMGN1-202ENST00000380747 SEC61BP60468 96 aaKnown RBP5.06□□□□□ -1.6
HMGN1-202ENST00000380747 Q6Q795 121 aa5.06□□□□□ -1.6
HMGN1-202ENST00000380747 A0A087WSZ3 146 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms