RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 UNQ6190/PRO20217Q6UXQ8 127 aa6.05□□□□□ -1.44
PTPRA-204ENST00000380393 XAGE1AQ9HD64 81 aa6.05□□□□□ -1.44
PTPRA-204ENST00000380393 RTL8CO15255 209 aa6.05□□□□□ -1.44
PTPRA-204ENST00000380393 IGKV2D-24A0A075B6R9 120 aa6.04□□□□□ -1.44
PTPRA-204ENST00000380393 A0A0J9YWU9 116 aa6.04□□□□□ -1.44
PTPRA-204ENST00000380393 A0A1B0GW54 56 aa6.04□□□□□ -1.44
PTPRA-204ENST00000380393 IGLV7-46A0A075B6I9 117 aa6.04□□□□□ -1.44
PTPRA-204ENST00000380393 Q6ZR54 194 aa6.04□□□□□ -1.44
PTPRA-204ENST00000380393 LINC00528Q8N1L1 170 aa6.04□□□□□ -1.44
PTPRA-204ENST00000380393 REG3AQ06141 175 aa6.03□□□□□ -1.44
PTPRA-204ENST00000380393 KRTAP10-3P60369 221 aa6.03□□□□□ -1.44
PTPRA-204ENST00000380393 CHCHD10Q8WYQ3 142 aaPredicted RBP6.03□□□□□ -1.44
PTPRA-204ENST00000380393 C16orf74Q96GX8 76 aa6.03□□□□□ -1.44
PTPRA-204ENST00000380393 NOTCH1P46531 2555 aa6.03□□□□□ -1.44
PTPRA-204ENST00000380393 IGLV5-48A0A075B6I7 105 aa6.03□□□□□ -1.44
PTPRA-204ENST00000380393 IGHV6-1A0A0B4J1U7 121 aa6.03□□□□□ -1.44
PTPRA-204ENST00000380393 C1orf137Q5JT78 98 aa6.03□□□□□ -1.44
PTPRA-204ENST00000380393 Q8NBF4 154 aa6.02□□□□□ -1.45
PTPRA-204ENST00000380393 PCOTHQ58A44 107 aa6.02□□□□□ -1.45
PTPRA-204ENST00000380393 DEFB4AO15263 64 aa6.01□□□□□ -1.45
PTPRA-204ENST00000380393 IGLV1-50A0A075B6I6 118 aa6.01□□□□□ -1.45
PTPRA-204ENST00000380393 Q8N377 158 aa6□□□□□ -1.45
PTPRA-204ENST00000380393 C4orf3Q8WVX3 66 aa6□□□□□ -1.45
PTPRA-204ENST00000380393 HTN3P15516 51 aa6□□□□□ -1.45
PTPRA-204ENST00000380393 C7orf33Q8WU49 177 aa5.98□□□□□ -1.45
PTPRA-204ENST00000380393 A0A087X002 238 aa5.98□□□□□ -1.45
PTPRA-204ENST00000380393 GIG44P09565 113 aaPredicted RBP5.98□□□□□ -1.45
PTPRA-204ENST00000380393 MGAM2Q2M2H8 2515 aa5.97□□□□□ -1.45
PTPRA-204ENST00000380393 SPRR4Q96PI1 79 aa5.96□□□□□ -1.46
PTPRA-204ENST00000380393 NBEAL1Q6ZS30 2694 aa5.96□□□□□ -1.46
PTPRA-204ENST00000380393 A0A1B0GUV1 79 aa5.96□□□□□ -1.46
PTPRA-204ENST00000380393 ROMO1P60602 79 aa5.96□□□□□ -1.46
PTPRA-204ENST00000380393 KRTAP24-1Q3LI83 254 aa5.95□□□□□ -1.46
PTPRA-204ENST00000380393 HRES1P13985 223 aa5.94□□□□□ -1.46
PTPRA-204ENST00000380393 KRTAP29-1A8MX34 341 aaPredicted RBP5.94□□□□□ -1.46
PTPRA-204ENST00000380393 RPL37AP61513 92 aaKnown RBP5.94□□□□□ -1.46
PTPRA-204ENST00000380393 ANK2Q01484 3957 aa5.94□□□□□ -1.46
PTPRA-204ENST00000380393 PRO0255Q9UI72 69 aa5.93□□□□□ -1.46
PTPRA-204ENST00000380393 IGLV5-37A0A075B6J1 123 aa5.92□□□□□ -1.46
PTPRA-204ENST00000380393 C6orf48Q9UBA6 75 aa5.92□□□□□ -1.46
PTPRA-204ENST00000380393 REG3GQ6UW15 175 aa5.91□□□□□ -1.46
PTPRA-204ENST00000380393 TNP2Q05952 138 aa5.91□□□□□ -1.46
PTPRA-204ENST00000380393 MIR22HGQ0VDD5 57 aa5.9□□□□□ -1.47
PTPRA-204ENST00000380393 CSNK1G2-AS1Q8NCQ2 148 aa5.89□□□□□ -1.47
PTPRA-204ENST00000380393 CAMK2N2Q96S95 79 aa5.89□□□□□ -1.47
PTPRA-204ENST00000380393 CMYA5Q8N3K9 4069 aa5.89□□□□□ -1.47
PTPRA-204ENST00000380393 A0A0G2JQZ4 141 aa5.88□□□□□ -1.47
PTPRA-204ENST00000380393 A0A1W2PNN7 141 aa5.88□□□□□ -1.47
PTPRA-204ENST00000380393 SPATA8Q6RVD6 105 aa5.88□□□□□ -1.47
PTPRA-204ENST00000380393 DNHD1Q96M86 4753 aa5.88□□□□□ -1.47
PTPRA-204ENST00000380393 DEFB135Q30KP9 77 aa5.88□□□□□ -1.47
PTPRA-204ENST00000380393 GVQW2A0A096LPI5 108 aaPredicted RBP5.87□□□□□ -1.47
PTPRA-204ENST00000380393 A0A087WSZ3 146 aa5.87□□□□□ -1.47
PTPRA-204ENST00000380393 CMC4P56277 68 aaPredicted RBP5.86□□□□□ -1.47
PTPRA-204ENST00000380393 DHRS4-AS1Q9P1J3 65 aa5.85□□□□□ -1.47
PTPRA-204ENST00000380393 C19orf73Q9NVV2 129 aa5.85□□□□□ -1.47
PTPRA-204ENST00000380393 A0A1B0GU69 56 aa5.84□□□□□ -1.47
PTPRA-204ENST00000380393 A8MWP4 228 aa5.83□□□□□ -1.48
PTPRA-204ENST00000380393 RPL37AP8A6NKH3 93 aa5.83□□□□□ -1.48
PTPRA-204ENST00000380393 TENM3Q9P273 2699 aa5.83□□□□□ -1.48
PTPRA-204ENST00000380393 UQCR11O14957 56 aa5.81□□□□□ -1.48
PTPRA-204ENST00000380393 Q6ZRX8 168 aa5.81□□□□□ -1.48
PTPRA-204ENST00000380393 X6R8D5 127 aa5.81□□□□□ -1.48
PTPRA-204ENST00000380393 ZNF861PO60384 105 aa5.81□□□□□ -1.48
PTPRA-204ENST00000380393 DEFB131BA0A096LNP1 70 aa5.8□□□□□ -1.48
PTPRA-204ENST00000380393 IGKV2-24A0A0C4DH68 120 aa5.8□□□□□ -1.48
PTPRA-204ENST00000380393 P0C880 135 aa5.8□□□□□ -1.48
PTPRA-204ENST00000380393 IGFL1Q6UW32 110 aa5.8□□□□□ -1.48
PTPRA-204ENST00000380393 KRTAP25-1Q3LHN0 102 aa5.79□□□□□ -1.48
PTPRA-204ENST00000380393 EGFEM1PQ0D2K5 195 aa5.79□□□□□ -1.48
PTPRA-204ENST00000380393 LELP1Q5T871 98 aa5.78□□□□□ -1.48
PTPRA-204ENST00000380393 KRTAP10-11P60412 298 aa5.77□□□□□ -1.49
PTPRA-204ENST00000380393 MMP24-AS1A0A0U1RRL7 71 aa5.75□□□□□ -1.49
PTPRA-204ENST00000380393 TP53AIP1Q9HCN2 124 aa5.75□□□□□ -1.49
PTPRA-204ENST00000380393 COL7A1Q02388 2944 aa5.75□□□□□ -1.49
PTPRA-204ENST00000380393 SPART-AS1P0CW21 52 aa5.73□□□□□ -1.49
PTPRA-204ENST00000380393 ACYP2P14621 99 aa5.73□□□□□ -1.49
PTPRA-204ENST00000380393 PRR34Q9NV39 138 aa5.73□□□□□ -1.49
PTPRA-204ENST00000380393 FAM168BA1KXE4 195 aa5.72□□□□□ -1.49
PTPRA-204ENST00000380393 STAB2Q8WWQ8 2551 aa5.72□□□□□ -1.49
PTPRA-204ENST00000380393 DNAH3Q8TD57 4116 aa5.71□□□□□ -1.5
PTPRA-204ENST00000380393 KRTAP16-1A8MUX0 517 aa5.71□□□□□ -1.5
PTPRA-204ENST00000380393 MEGF8Q7Z7M0 2845 aa5.71□□□□□ -1.5
PTPRA-204ENST00000380393 KRTAP4-16G5E9R7 235 aaPredicted RBP5.7□□□□□ -1.5
PTPRA-204ENST00000380393 TGP01266 2768 aa5.7□□□□□ -1.5
PTPRA-204ENST00000380393 A8MUU9 505 aa5.7□□□□□ -1.5
PTPRA-204ENST00000380393 LINC00483Q53H64 154 aa5.7□□□□□ -1.5
PTPRA-204ENST00000380393 C15orf56Q8N910 161 aa5.7□□□□□ -1.5
PTPRA-204ENST00000380393 LINC00472Q9H8W2 130 aa5.7□□□□□ -1.5
PTPRA-204ENST00000380393 DNAH10OSP0CZ25 163 aa5.69□□□□□ -1.5
PTPRA-204ENST00000380393 A0A096LNI7 61 aa5.69□□□□□ -1.5
PTPRA-204ENST00000380393 IGLV5-52A0A0A0MRZ9 124 aa5.69□□□□□ -1.5
PTPRA-204ENST00000380393 NOTCH2NLQ7Z3S9 236 aa5.68□□□□□ -1.5
PTPRA-204ENST00000380393 TENM2Q9NT68 2774 aa5.68□□□□□ -1.5
PTPRA-204ENST00000380393 FLG2Q5D862 2391 aaPredicted RBP5.68□□□□□ -1.5
PTPRA-204ENST00000380393 IGLV8-61A0A075B6I0 122 aa5.68□□□□□ -1.5
PTPRA-204ENST00000380393 PRKDCP78527 4128 aaKnown RBP5.67□□□□□ -1.5
PTPRA-204ENST00000380393 SPRR1AP35321 89 aa5.67□□□□□ -1.5
PTPRA-204ENST00000380393 NDUFAF8A1L188 74 aa5.66□□□□□ -1.5
PTPRA-204ENST00000380393 CSMD3Q7Z407 3707 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms