RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 TRIAP1O43715 76 aa6.98□□□□□ -1.29
PCNA-201ENST00000379143 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.98□□□□□ -1.29
PCNA-201ENST00000379143 SSBP3-AS1Q7Z2R9 100 aa6.98□□□□□ -1.29
PCNA-201ENST00000379143 LRP2P98164 4655 aa6.98□□□□□ -1.29
PCNA-201ENST00000379143 TNXBP22105 4242 aa6.97□□□□□ -1.29
PCNA-201ENST00000379143 TSPAN13O95857 204 aa6.97□□□□□ -1.29
PCNA-201ENST00000379143 MOBPQ13875 183 aa6.97□□□□□ -1.29
PCNA-201ENST00000379143 Q6ZQY7 126 aa6.97□□□□□ -1.29
PCNA-201ENST00000379143 LINC00304Q8N9R0 145 aa6.97□□□□□ -1.29
PCNA-201ENST00000379143 LINC01547P58512 204 aaPredicted RBP6.96□□□□□ -1.3
PCNA-201ENST00000379143 OCIAD2Q56VL3 154 aa6.96□□□□□ -1.3
PCNA-201ENST00000379143 C9orf153Q5TBE3 101 aa6.96□□□□□ -1.3
PCNA-201ENST00000379143 SPAG11AQ6PDA7 123 aa6.96□□□□□ -1.3
PCNA-201ENST00000379143 Q8NBF4 154 aa6.96□□□□□ -1.3
PCNA-201ENST00000379143 PPDPFLQ8WWR9 84 aa6.96□□□□□ -1.3
PCNA-201ENST00000379143 Q8N377 158 aa6.95□□□□□ -1.3
PCNA-201ENST00000379143 FAM218AQ96MZ4 157 aa6.93□□□□□ -1.3
PCNA-201ENST00000379143 F8WEM9 126 aa6.92□□□□□ -1.3
PCNA-201ENST00000379143 DNAL4O96015 105 aa6.92□□□□□ -1.3
PCNA-201ENST00000379143 SCGB1C2P0DMR2 95 aa6.92□□□□□ -1.3
PCNA-201ENST00000379143 SMIM29Q86T20 159 aa6.92□□□□□ -1.3
PCNA-201ENST00000379143 SPINK1P00995 79 aa6.91□□□□□ -1.3
PCNA-201ENST00000379143 BATFQ16520 125 aa6.91□□□□□ -1.3
PCNA-201ENST00000379143 CLEC2BQ92478 149 aa6.91□□□□□ -1.3
PCNA-201ENST00000379143 H3BQ85 93 aa6.9□□□□□ -1.3
PCNA-201ENST00000379143 SNHG12Q9BXW3 62 aa6.89□□□□□ -1.31
PCNA-201ENST00000379143 RPS29P62273 56 aaKnown RBP6.88□□□□□ -1.31
PCNA-201ENST00000379143 H3BS24 57 aa6.87□□□□□ -1.31
PCNA-201ENST00000379143 TRACP01848 142 aa6.87□□□□□ -1.31
PCNA-201ENST00000379143 LYRM7Q5U5X0 104 aa6.87□□□□□ -1.31
PCNA-201ENST00000379143 LST1O00453 97 aa6.86□□□□□ -1.31
PCNA-201ENST00000379143 CD164Q04900 197 aa6.86□□□□□ -1.31
PCNA-201ENST00000379143 ORMDL1Q9P0S3 153 aa6.86□□□□□ -1.31
PCNA-201ENST00000379143 IGLV8-61A0A075B6I0 122 aa6.85□□□□□ -1.31
PCNA-201ENST00000379143 TMEM256-PLSCR3K7ERE1 68 aa6.85□□□□□ -1.31
PCNA-201ENST00000379143 Q6JHZ5 121 aa6.85□□□□□ -1.31
PCNA-201ENST00000379143 FABP2P12104 132 aa6.84□□□□□ -1.31
PCNA-201ENST00000379143 NDUFV3P56181 108 aaKnown RBP6.83□□□□□ -1.32
PCNA-201ENST00000379143 ATXN8Q156A1 80 aa6.83□□□□□ -1.32
PCNA-201ENST00000379143 NAA38Q9BRA0 125 aaKnown RBP6.83□□□□□ -1.32
PCNA-201ENST00000379143 TRBV20-1A0A075B6N2 111 aa6.82□□□□□ -1.32
PCNA-201ENST00000379143 C9orf118A6NHY6 69 aa6.82□□□□□ -1.32
PCNA-201ENST00000379143 H3BUT2 72 aa6.82□□□□□ -1.32
PCNA-201ENST00000379143 LIMD2Q9BT23 127 aa6.82□□□□□ -1.32
PCNA-201ENST00000379143 PRR4Q16378 134 aa6.81□□□□□ -1.32
PCNA-201ENST00000379143 H3BMG7 143 aa6.8□□□□□ -1.32
PCNA-201ENST00000379143 TAX1BP3O14907 124 aa6.8□□□□□ -1.32
PCNA-201ENST00000379143 TCL1BO95988 128 aa6.8□□□□□ -1.32
PCNA-201ENST00000379143 HRCT1Q6UXD1 115 aa6.8□□□□□ -1.32
PCNA-201ENST00000379143 PCP4L1A6NKN8 68 aa6.79□□□□□ -1.32
PCNA-201ENST00000379143 UBE2V1Q13404 147 aa6.79□□□□□ -1.32
PCNA-201ENST00000379143 COL5A1-AS1Q5SY13 56 aa6.79□□□□□ -1.32
PCNA-201ENST00000379143 IGFL1Q6UW32 110 aa6.79□□□□□ -1.32
PCNA-201ENST00000379143 A0A1W2PPM0 123 aa6.78□□□□□ -1.32
PCNA-201ENST00000379143 FP248Q71RG6 208 aaPredicted RBP6.78□□□□□ -1.32
PCNA-201ENST00000379143 RETNLBQ9BQ08 111 aa6.78□□□□□ -1.32
PCNA-201ENST00000379143 Q5XG85 94 aa6.77□□□□□ -1.32
PCNA-201ENST00000379143 A0A0G2JQZ4 141 aa6.76□□□□□ -1.33
PCNA-201ENST00000379143 BAALC-AS2P0C853 105 aa6.76□□□□□ -1.33
PCNA-201ENST00000379143 Q6Q795 121 aa6.75□□□□□ -1.33
PCNA-201ENST00000379143 TEN1Q86WV5 123 aa6.75□□□□□ -1.33
PCNA-201ENST00000379143 ANKRD29Q8N6D5 301 aa6.75□□□□□ -1.33
PCNA-201ENST00000379143 IGLV7-46A0A075B6I9 117 aa6.74□□□□□ -1.33
PCNA-201ENST00000379143 TRBV7-7A0A0K0K1E9 115 aa6.74□□□□□ -1.33
PCNA-201ENST00000379143 C9JAW5 83 aa6.73□□□□□ -1.33
PCNA-201ENST00000379143 RBM3P98179 157 aaKnown RBP6.73□□□□□ -1.33
PCNA-201ENST00000379143 JMJD7-PLA2G4BH0Y9G9 81 aa6.72□□□□□ -1.33
PCNA-201ENST00000379143 A0A1B0GV72 72 aa6.71□□□□□ -1.34
PCNA-201ENST00000379143 TPRXLQ17RH7 258 aa6.71□□□□□ -1.34
PCNA-201ENST00000379143 ASB16-AS1Q495Z4 193 aa6.71□□□□□ -1.34
PCNA-201ENST00000379143 DSCR8Q96T75 97 aa6.71□□□□□ -1.34
PCNA-201ENST00000379143 SS18L2Q9UHA2 77 aa6.71□□□□□ -1.34
PCNA-201ENST00000379143 SPCS1Q9Y6A9 102 aa6.71□□□□□ -1.34
PCNA-201ENST00000379143 LPAP08519 4548 aa6.7□□□□□ -1.34
PCNA-201ENST00000379143 TRBV7-4A0A0J9YYF1 115 aa6.7□□□□□ -1.34
PCNA-201ENST00000379143 H3BT86 120 aa6.69□□□□□ -1.34
PCNA-201ENST00000379143 CCKP06307 115 aa6.68□□□□□ -1.34
PCNA-201ENST00000379143 C1orf195Q5TG92 126 aa6.68□□□□□ -1.34
PCNA-201ENST00000379143 A0A1W2PNM2 257 aa6.67□□□□□ -1.34
PCNA-201ENST00000379143 KRTAP4-8Q9BYQ9 185 aa6.67□□□□□ -1.34
PCNA-201ENST00000379143 A0A087WSZ3 146 aa6.66□□□□□ -1.34
PCNA-201ENST00000379143 PDE6GP18545 87 aa6.66□□□□□ -1.34
PCNA-201ENST00000379143 CDIP1Q9H305 208 aa6.66□□□□□ -1.34
PCNA-201ENST00000379143 C21orf62-AS1Q17RA5 79 aa6.65□□□□□ -1.35
PCNA-201ENST00000379143 K7EP34 96 aa6.64□□□□□ -1.35
PCNA-201ENST00000379143 KRTAP13-3Q3SY46 172 aa6.64□□□□□ -1.35
PCNA-201ENST00000379143 GTF2H5Q6ZYL4 71 aa6.64□□□□□ -1.35
PCNA-201ENST00000379143 KRTAP9-2Q9BYQ4 174 aa6.64□□□□□ -1.35
PCNA-201ENST00000379143 LOC110117498A0A087WWA1 95 aa6.63□□□□□ -1.35
PCNA-201ENST00000379143 OBSCN-AS1Q96MR7 158 aa6.63□□□□□ -1.35
PCNA-201ENST00000379143 VPS25Q9BRG1 176 aa6.63□□□□□ -1.35
PCNA-201ENST00000379143 A0A1B0GW54 56 aa6.62□□□□□ -1.35
PCNA-201ENST00000379143 MTURNQ8N3F0 131 aa6.62□□□□□ -1.35
PCNA-201ENST00000379143 MUC2Q02817 5179 aa6.61□□□□□ -1.35
PCNA-201ENST00000379143 Q6ZQT0 140 aa6.61□□□□□ -1.35
PCNA-201ENST00000379143 C14orf132Q9NPU4 83 aa6.6□□□□□ -1.35
PCNA-201ENST00000379143 F8W1H4 67 aa6.56□□□□□ -1.36
PCNA-201ENST00000379143 Q96NJ1 140 aa6.56□□□□□ -1.36
PCNA-201ENST00000379143 PRO0461Q9UI25 63 aa6.56□□□□□ -1.36
PCNA-201ENST00000379143 C9orf92A6NGG3 77 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms