RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 UQCR10Q9UDW1 63 aa10.64□□□□□ -0.71
TMEM88B-201ENST00000378821 hADV29S1A0JD25 119 aa10.63□□□□□ -0.71
TMEM88B-201ENST00000378821 FAT4Q6V0I7 4981 aa10.61□□□□□ -0.71
TMEM88B-201ENST00000378821 Q6ZQY7 126 aa10.61□□□□□ -0.71
TMEM88B-201ENST00000378821 PRO1854Q9UHT4 67 aa10.6□□□□□ -0.71
TMEM88B-201ENST00000378821 ASB16-AS1Q495Z4 193 aa10.58□□□□□ -0.72
TMEM88B-201ENST00000378821 HRCT1Q6UXD1 115 aa10.57□□□□□ -0.72
TMEM88B-201ENST00000378821 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.56□□□□□ -0.72
TMEM88B-201ENST00000378821 PRO1933Q9H354 126 aa10.56□□□□□ -0.72
TMEM88B-201ENST00000378821 K7ERJ3 54 aa10.55□□□□□ -0.72
TMEM88B-201ENST00000378821 FAM218AQ96MZ4 157 aa10.55□□□□□ -0.72
TMEM88B-201ENST00000378821 A0A0G2JQZ4 141 aa10.53□□□□□ -0.72
TMEM88B-201ENST00000378821 H0YGX0 51 aa10.53□□□□□ -0.72
TMEM88B-201ENST00000378821 SMIM6P0DI80 62 aa10.53□□□□□ -0.72
TMEM88B-201ENST00000378821 TRIAP1O43715 76 aa10.52□□□□□ -0.73
TMEM88B-201ENST00000378821 F8WEM9 126 aa10.5□□□□□ -0.73
TMEM88B-201ENST00000378821 CD164Q04900 197 aa10.5□□□□□ -0.73
TMEM88B-201ENST00000378821 LIMD2Q9BT23 127 aa10.49□□□□□ -0.73
TMEM88B-201ENST00000378821 KRTAP9-2Q9BYQ4 174 aa10.49□□□□□ -0.73
TMEM88B-201ENST00000378821 SEC61BP60468 96 aaKnown RBP10.48□□□□□ -0.73
TMEM88B-201ENST00000378821 PPDPFLQ8WWR9 84 aa10.48□□□□□ -0.73
TMEM88B-201ENST00000378821 XP32Q5T750 250 aa10.47□□□□□ -0.73
TMEM88B-201ENST00000378821 KRTAP4-1Q9BYQ7 146 aa10.47□□□□□ -0.73
TMEM88B-201ENST00000378821 IGLV8-61A0A075B6I0 122 aa10.45□□□□□ -0.74
TMEM88B-201ENST00000378821 LOC105371267A0A1B0GV96 52 aa10.45□□□□□ -0.74
TMEM88B-201ENST00000378821 A0A1B0GX51 115 aa10.45□□□□□ -0.74
TMEM88B-201ENST00000378821 SNCGO76070 127 aa10.45□□□□□ -0.74
TMEM88B-201ENST00000378821 CLEC2BQ92478 149 aa10.45□□□□□ -0.74
TMEM88B-201ENST00000378821 PSMB2P49721 201 aa10.44□□□□□ -0.74
TMEM88B-201ENST00000378821 OCIAD2Q56VL3 154 aa10.44□□□□□ -0.74
TMEM88B-201ENST00000378821 SNHG12Q9BXW3 62 aa10.44□□□□□ -0.74
TMEM88B-201ENST00000378821 Q6JHZ5 121 aa10.42□□□□□ -0.74
TMEM88B-201ENST00000378821 IGFL1Q6UW32 110 aa10.42□□□□□ -0.74
TMEM88B-201ENST00000378821 Q5XG85 94 aa10.41□□□□□ -0.74
TMEM88B-201ENST00000378821 H3BUT2 72 aa10.4□□□□□ -0.74
TMEM88B-201ENST00000378821 COX6CP09669 75 aa10.38□□□□□ -0.75
TMEM88B-201ENST00000378821 M0R143 59 aa10.36□□□□□ -0.75
TMEM88B-201ENST00000378821 NDUFV3P56181 108 aaKnown RBP10.36□□□□□ -0.75
TMEM88B-201ENST00000378821 DNAL4O96015 105 aa10.35□□□□□ -0.75
TMEM88B-201ENST00000378821 TRBV7-7A0A0K0K1E9 115 aa10.34□□□□□ -0.75
TMEM88B-201ENST00000378821 TSTD3H0UI37 97 aa10.34□□□□□ -0.75
TMEM88B-201ENST00000378821 FABP2P12104 132 aa10.34□□□□□ -0.75
TMEM88B-201ENST00000378821 C1orf195Q5TG92 126 aa10.34□□□□□ -0.75
TMEM88B-201ENST00000378821 GHRHP01286 108 aa10.33□□□□□ -0.76
TMEM88B-201ENST00000378821 TCL1BO95988 128 aa10.32□□□□□ -0.76
TMEM88B-201ENST00000378821 ORMDL1Q9P0S3 153 aa10.32□□□□□ -0.76
TMEM88B-201ENST00000378821 SCGB1C2P0DMR2 95 aa10.3□□□□□ -0.76
TMEM88B-201ENST00000378821 H3BMG7 143 aa10.29□□□□□ -0.76
TMEM88B-201ENST00000378821 LST1O00453 97 aa10.29□□□□□ -0.76
TMEM88B-201ENST00000378821 TRACP01848 142 aa10.27□□□□□ -0.77
TMEM88B-201ENST00000378821 NAA38Q9BRA0 125 aaKnown RBP10.27□□□□□ -0.77
TMEM88B-201ENST00000378821 H3BQ85 93 aa10.26□□□□□ -0.77
TMEM88B-201ENST00000378821 LCE2CQ5TA81 110 aa10.26□□□□□ -0.77
TMEM88B-201ENST00000378821 Q6Q795 121 aa10.26□□□□□ -0.77
TMEM88B-201ENST00000378821 A0A1B0GV72 72 aa10.25□□□□□ -0.77
TMEM88B-201ENST00000378821 C9orf92A6NGG3 77 aa10.25□□□□□ -0.77
TMEM88B-201ENST00000378821 KRTAP19-2Q3LHN2 52 aa10.25□□□□□ -0.77
TMEM88B-201ENST00000378821 TMEM256-PLSCR3K7ERE1 68 aa10.24□□□□□ -0.77
TMEM88B-201ENST00000378821 BATFQ16520 125 aa10.23□□□□□ -0.77
TMEM88B-201ENST00000378821 TEN1Q86WV5 123 aa10.23□□□□□ -0.77
TMEM88B-201ENST00000378821 PCOTHQ58A44 107 aa10.21□□□□□ -0.77
TMEM88B-201ENST00000378821 A0A1W2PNM2 257 aa10.2□□□□□ -0.78
TMEM88B-201ENST00000378821 UBE2V1Q13404 147 aa10.2□□□□□ -0.78
TMEM88B-201ENST00000378821 A0A087WSZ3 146 aa10.18□□□□□ -0.78
TMEM88B-201ENST00000378821 ANKRD29Q8N6D5 301 aa10.18□□□□□ -0.78
TMEM88B-201ENST00000378821 SS18L2Q9UHA2 77 aa10.18□□□□□ -0.78
TMEM88B-201ENST00000378821 KRTAP9-6A0A140TA67 174 aa10.17□□□□□ -0.78
TMEM88B-201ENST00000378821 ATXN8Q156A1 80 aa10.16□□□□□ -0.78
TMEM88B-201ENST00000378821 LCE2DQ5TA82 110 aaPredicted RBP10.16□□□□□ -0.78
TMEM88B-201ENST00000378821 BAALC-AS2P0C853 105 aa10.14□□□□□ -0.79
TMEM88B-201ENST00000378821 TRBV7-4A0A0J9YYF1 115 aa10.11□□□□□ -0.79
TMEM88B-201ENST00000378821 LYRM7Q5U5X0 104 aa10.11□□□□□ -0.79
TMEM88B-201ENST00000378821 Q96NJ1 140 aa10.11□□□□□ -0.79
TMEM88B-201ENST00000378821 CCKP06307 115 aa10.1□□□□□ -0.79
TMEM88B-201ENST00000378821 RPL37P61927 97 aaKnown RBP10.1□□□□□ -0.79
TMEM88B-201ENST00000378821 MT1HP80294 61 aa10.1□□□□□ -0.79
TMEM88B-201ENST00000378821 TAX1BP3O14907 124 aa10.09□□□□□ -0.79
TMEM88B-201ENST00000378821 RBM3P98179 157 aaKnown RBP10.09□□□□□ -0.79
TMEM88B-201ENST00000378821 C9orf118A6NHY6 69 aa10.08□□□□□ -0.8
TMEM88B-201ENST00000378821 TRBV20-1A0A075B6N2 111 aa10.06□□□□□ -0.8
TMEM88B-201ENST00000378821 DSCR8Q96T75 97 aa10.06□□□□□ -0.8
TMEM88B-201ENST00000378821 OBSCN-AS1Q96MR7 158 aa10.04□□□□□ -0.8
TMEM88B-201ENST00000378821 VPS25Q9BRG1 176 aa10.04□□□□□ -0.8
TMEM88B-201ENST00000378821 C9JAW5 83 aa10.03□□□□□ -0.8
TMEM88B-201ENST00000378821 A0A1W2PPM0 123 aa10.02□□□□□ -0.81
TMEM88B-201ENST00000378821 SIGMAR1Q99720 223 aa10.01□□□□□ -0.81
TMEM88B-201ENST00000378821 JMJD7-PLA2G4BH0Y9G9 81 aa9.99□□□□□ -0.81
TMEM88B-201ENST00000378821 LINC00472Q9H8W2 130 aa9.98□□□□□ -0.81
TMEM88B-201ENST00000378821 IGKV4-1P06312 121 aa9.97□□□□□ -0.81
TMEM88B-201ENST00000378821 Q6ZQT0 140 aa9.97□□□□□ -0.81
TMEM88B-201ENST00000378821 LORP23490 312 aaPredicted RBP9.96□□□□□ -0.82
TMEM88B-201ENST00000378821 DEFB116Q30KQ4 102 aa9.96□□□□□ -0.82
TMEM88B-201ENST00000378821 LOC110117498A0A087WWA1 95 aa9.95□□□□□ -0.82
TMEM88B-201ENST00000378821 MTURNQ8N3F0 131 aa9.95□□□□□ -0.82
TMEM88B-201ENST00000378821 Q75L30 129 aa9.94□□□□□ -0.82
TMEM88B-201ENST00000378821 C14orf132Q9NPU4 83 aa9.94□□□□□ -0.82
TMEM88B-201ENST00000378821 DSCR10P59022 87 aa9.93□□□□□ -0.82
TMEM88B-201ENST00000378821 H3BT86 120 aa9.92□□□□□ -0.82
TMEM88B-201ENST00000378821 KRTAP10-6P60371 365 aaPredicted RBP9.92□□□□□ -0.82
TMEM88B-201ENST00000378821 COL5A1-AS1Q5SY13 56 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms