RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 F8WEM9 126 aa9.34□□□□□ -0.91
HMGN4-201ENST00000377575 ASB16-AS1Q495Z4 193 aa9.34□□□□□ -0.91
HMGN4-201ENST00000377575 BVES-AS1Q5T3Y7 98 aa9.34□□□□□ -0.91
HMGN4-201ENST00000377575 VAMP8Q9BV40 100 aa9.34□□□□□ -0.91
HMGN4-201ENST00000377575 SEC61BP60468 96 aaKnown RBP9.33□□□□□ -0.92
HMGN4-201ENST00000377575 Q6ZQY7 126 aa9.33□□□□□ -0.92
HMGN4-201ENST00000377575 C14orf144Q96I85 54 aa9.33□□□□□ -0.92
HMGN4-201ENST00000377575 HIGD1BQ9P298 99 aa9.33□□□□□ -0.92
HMGN4-201ENST00000377575 Q5XG85 94 aa9.31□□□□□ -0.92
HMGN4-201ENST00000377575 XP32Q5T750 250 aa9.3□□□□□ -0.92
HMGN4-201ENST00000377575 RAB37Q96AX2 223 aa9.3□□□□□ -0.92
HMGN4-201ENST00000377575 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.29□□□□□ -0.92
HMGN4-201ENST00000377575 A0A0B4J2C4 111 aa9.27□□□□□ -0.93
HMGN4-201ENST00000377575 A0A0G2JQZ4 141 aa9.27□□□□□ -0.93
HMGN4-201ENST00000377575 CFC1BP0CG36 223 aa9.27□□□□□ -0.93
HMGN4-201ENST00000377575 CFC1P0CG37 223 aa9.27□□□□□ -0.93
HMGN4-201ENST00000377575 PPDPFLQ8WWR9 84 aa9.27□□□□□ -0.93
HMGN4-201ENST00000377575 Q6JHZ5 121 aa9.26□□□□□ -0.93
HMGN4-201ENST00000377575 C2orf91Q6ZV80 131 aa9.26□□□□□ -0.93
HMGN4-201ENST00000377575 TCL1BO95988 128 aa9.25□□□□□ -0.93
HMGN4-201ENST00000377575 TMEM238LA0A1B0GVL6 79 aa9.24□□□□□ -0.93
HMGN4-201ENST00000377575 SNCGO76070 127 aa9.24□□□□□ -0.93
HMGN4-201ENST00000377575 FAT4Q6V0I7 4981 aa9.23□□□□□ -0.93
HMGN4-201ENST00000377575 IGLV8-61A0A075B6I0 122 aa9.23□□□□□ -0.93
HMGN4-201ENST00000377575 C1orf195Q5TG92 126 aa9.23□□□□□ -0.93
HMGN4-201ENST00000377575 CEND1Q8N111 149 aa9.23□□□□□ -0.93
HMGN4-201ENST00000377575 CLEC2BQ92478 149 aa9.23□□□□□ -0.93
HMGN4-201ENST00000377575 C9orf92A6NGG3 77 aa9.22□□□□□ -0.93
HMGN4-201ENST00000377575 H0YGX0 51 aa9.21□□□□□ -0.94
HMGN4-201ENST00000377575 SNHG12Q9BXW3 62 aa9.21□□□□□ -0.94
HMGN4-201ENST00000377575 OCIAD2Q56VL3 154 aa9.2□□□□□ -0.94
HMGN4-201ENST00000377575 IGFL1Q6UW32 110 aa9.2□□□□□ -0.94
HMGN4-201ENST00000377575 TRBV7-7A0A0K0K1E9 115 aa9.17□□□□□ -0.94
HMGN4-201ENST00000377575 PYY3Q5JQD4 70 aa9.17□□□□□ -0.94
HMGN4-201ENST00000377575 PRO1854Q9UHT4 67 aa9.17□□□□□ -0.94
HMGN4-201ENST00000377575 KRTAP4-1Q9BYQ7 146 aa9.16□□□□□ -0.94
HMGN4-201ENST00000377575 FXYD2P54710 66 aa9.15□□□□□ -0.94
HMGN4-201ENST00000377575 FAM218AQ96MZ4 157 aa9.15□□□□□ -0.94
HMGN4-201ENST00000377575 A0A1B0GX51 115 aa9.14□□□□□ -0.95
HMGN4-201ENST00000377575 H3BUT2 72 aa9.13□□□□□ -0.95
HMGN4-201ENST00000377575 HSD52Q0P140 79 aa9.13□□□□□ -0.95
HMGN4-201ENST00000377575 TMA7Q9Y2S6 64 aaKnown RBP9.13□□□□□ -0.95
HMGN4-201ENST00000377575 PCOTHQ58A44 107 aa9.12□□□□□ -0.95
HMGN4-201ENST00000377575 TRIAP1O43715 76 aa9.1□□□□□ -0.95
HMGN4-201ENST00000377575 NDUFV3P56181 108 aaKnown RBP9.09□□□□□ -0.95
HMGN4-201ENST00000377575 SS18L2Q9UHA2 77 aa9.08□□□□□ -0.96
HMGN4-201ENST00000377575 Q6Q795 121 aa9.07□□□□□ -0.96
HMGN4-201ENST00000377575 UQCR10Q9UDW1 63 aa9.07□□□□□ -0.96
HMGN4-201ENST00000377575 LST1O00453 97 aa9.06□□□□□ -0.96
HMGN4-201ENST00000377575 DNAL4O96015 105 aa9.06□□□□□ -0.96
HMGN4-201ENST00000377575 FABP2P12104 132 aa9.06□□□□□ -0.96
HMGN4-201ENST00000377575 RPL37P61927 97 aaKnown RBP9.06□□□□□ -0.96
HMGN4-201ENST00000377575 K7ERJ3 54 aa9.05□□□□□ -0.96
HMGN4-201ENST00000377575 PSMB2P49721 201 aa9.05□□□□□ -0.96
HMGN4-201ENST00000377575 TEN1Q86WV5 123 aa9.05□□□□□ -0.96
HMGN4-201ENST00000377575 H3BMG7 143 aa9.04□□□□□ -0.96
HMGN4-201ENST00000377575 COX6CP09669 75 aa9.04□□□□□ -0.96
HMGN4-201ENST00000377575 H3BQ85 93 aa9.02□□□□□ -0.97
HMGN4-201ENST00000377575 ORMDL1Q9P0S3 153 aa9.02□□□□□ -0.97
HMGN4-201ENST00000377575 A0A087WSZ3 146 aa8.99□□□□□ -0.97
HMGN4-201ENST00000377575 OBSCN-AS1Q96MR7 158 aa8.98□□□□□ -0.97
HMGN4-201ENST00000377575 TMEM256-PLSCR3K7ERE1 68 aa8.96□□□□□ -0.98
HMGN4-201ENST00000377575 ANKRD29Q8N6D5 301 aa8.94□□□□□ -0.98
HMGN4-201ENST00000377575 KRTAP9-2Q9BYQ4 174 aa8.94□□□□□ -0.98
HMGN4-201ENST00000377575 A0A1W2PNM2 257 aa8.93□□□□□ -0.98
HMGN4-201ENST00000377575 Q75L30 129 aa8.93□□□□□ -0.98
HMGN4-201ENST00000377575 A0A1B0GV72 72 aa8.92□□□□□ -0.98
HMGN4-201ENST00000377575 KRTAP19-2Q3LHN2 52 aa8.92□□□□□ -0.98
HMGN4-201ENST00000377575 TRBV7-4A0A0J9YYF1 115 aa8.91□□□□□ -0.98
HMGN4-201ENST00000377575 TRACP01848 142 aa8.91□□□□□ -0.98
HMGN4-201ENST00000377575 SCGB1C2P0DMR2 95 aa8.91□□□□□ -0.98
HMGN4-201ENST00000377575 UBE2V1Q13404 147 aa8.9□□□□□ -0.98
HMGN4-201ENST00000377575 ATP11AUNQ6ZP68 121 aa8.9□□□□□ -0.98
HMGN4-201ENST00000377575 Q96NJ1 140 aa8.9□□□□□ -0.98
HMGN4-201ENST00000377575 KRTAP4-8Q9BYQ9 185 aa8.9□□□□□ -0.98
HMGN4-201ENST00000377575 SIGMAR1Q99720 223 aa8.88□□□□□ -0.99
HMGN4-201ENST00000377575 M0R143 59 aa8.87□□□□□ -0.99
HMGN4-201ENST00000377575 CCKP06307 115 aa8.86□□□□□ -0.99
HMGN4-201ENST00000377575 SMIM6P0DI80 62 aa8.84□□□□□ -0.99
HMGN4-201ENST00000377575 MT1HP80294 61 aa8.84□□□□□ -0.99
HMGN4-201ENST00000377575 C20orf166-AS1Q96NR2 134 aa8.84□□□□□ -0.99
HMGN4-201ENST00000377575 COX6B2Q6YFQ2 88 aa8.83□□□□□ -1
HMGN4-201ENST00000377575 IGKV4-1P06312 121 aa8.82□□□□□ -1
HMGN4-201ENST00000377575 RBM3P98179 157 aaKnown RBP8.82□□□□□ -1
HMGN4-201ENST00000377575 A8MUU9 505 aa8.81□□□□□ -1
HMGN4-201ENST00000377575 DSCR10P59022 87 aa8.81□□□□□ -1
HMGN4-201ENST00000377575 DSCR8Q96T75 97 aa8.81□□□□□ -1
HMGN4-201ENST00000377575 VPS25Q9BRG1 176 aa8.79□□□□□ -1
HMGN4-201ENST00000377575 BAALC-AS2P0C853 105 aa8.78□□□□□ -1
HMGN4-201ENST00000377575 LINC00313P59037 77 aa8.78□□□□□ -1
HMGN4-201ENST00000377575 ATXN8Q156A1 80 aa8.78□□□□□ -1
HMGN4-201ENST00000377575 LINC00472Q9H8W2 130 aa8.77□□□□□ -1.01
HMGN4-201ENST00000377575 C21orf62-AS1Q17RA5 79 aa8.76□□□□□ -1.01
HMGN4-201ENST00000377575 C9JAW5 83 aa8.75□□□□□ -1.01
HMGN4-201ENST00000377575 TSTD3H0UI37 97 aa8.74□□□□□ -1.01
HMGN4-201ENST00000377575 DEFB116Q30KQ4 102 aa8.74□□□□□ -1.01
HMGN4-201ENST00000377575 NAA38Q9BRA0 125 aaKnown RBP8.74□□□□□ -1.01
HMGN4-201ENST00000377575 M0R2T5 61 aa8.73□□□□□ -1.01
HMGN4-201ENST00000377575 LYRM7Q5U5X0 104 aa8.73□□□□□ -1.01
HMGN4-201ENST00000377575 IGHV6-1A0A0B4J1U7 121 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms