RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 NHP2Q9NX24 153 aaKnown RBP7.83□□□□□ -1.16
CLCN6-204ENST00000376491 TRAV13-2A0A0B4J235 113 aa7.82□□□□□ -1.16
CLCN6-204ENST00000376491 COA6Q5JTJ3 125 aaKnown RBP7.82□□□□□ -1.16
CLCN6-204ENST00000376491 F8WEM9 126 aa7.79□□□□□ -1.16
CLCN6-204ENST00000376491 LINC00575Q6W349 94 aa7.79□□□□□ -1.16
CLCN6-204ENST00000376491 TRBV7-7A0A0K0K1E9 115 aa7.78□□□□□ -1.16
CLCN6-204ENST00000376491 C20orf202A1L168 122 aa7.78□□□□□ -1.16
CLCN6-204ENST00000376491 IGFL1Q6UW32 110 aa7.78□□□□□ -1.16
CLCN6-204ENST00000376491 Q6ZQY7 126 aa7.77□□□□□ -1.17
CLCN6-204ENST00000376491 Q6JHZ5 121 aa7.76□□□□□ -1.17
CLCN6-204ENST00000376491 hADV29S1A0JD25 119 aa7.75□□□□□ -1.17
CLCN6-204ENST00000376491 VAMP3Q15836 100 aa7.75□□□□□ -1.17
CLCN6-204ENST00000376491 Q75L30 129 aa7.75□□□□□ -1.17
CLCN6-204ENST00000376491 CLEC2BQ92478 149 aa7.75□□□□□ -1.17
CLCN6-204ENST00000376491 OBSCN-AS1Q96MR7 158 aa7.75□□□□□ -1.17
CLCN6-204ENST00000376491 OCIAD2Q56VL3 154 aa7.74□□□□□ -1.17
CLCN6-204ENST00000376491 Q6Q795 121 aa7.74□□□□□ -1.17
CLCN6-204ENST00000376491 ATP11AUNQ6ZP68 121 aa7.73□□□□□ -1.17
CLCN6-204ENST00000376491 SNRPEP62304 92 aaKnown RBP7.69□□□□□ -1.18
CLCN6-204ENST00000376491 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.68□□□□□ -1.18
CLCN6-204ENST00000376491 H3BUT2 72 aa7.67□□□□□ -1.18
CLCN6-204ENST00000376491 Q96NJ1 140 aa7.67□□□□□ -1.18
CLCN6-204ENST00000376491 KRTAP9-8Q9BYQ0 159 aa7.67□□□□□ -1.18
CLCN6-204ENST00000376491 LST1O00453 97 aa7.66□□□□□ -1.18
CLCN6-204ENST00000376491 PPDPFLQ8WWR9 84 aa7.65□□□□□ -1.18
CLCN6-204ENST00000376491 C20orf166-AS1Q96NR2 134 aa7.64□□□□□ -1.19
CLCN6-204ENST00000376491 C12orf57Q99622 126 aa7.64□□□□□ -1.19
CLCN6-204ENST00000376491 SNHG12Q9BXW3 62 aa7.64□□□□□ -1.19
CLCN6-204ENST00000376491 A8MUU9 505 aa7.62□□□□□ -1.19
CLCN6-204ENST00000376491 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.62□□□□□ -1.19
CLCN6-204ENST00000376491 BVES-AS1Q5T3Y7 98 aa7.62□□□□□ -1.19
CLCN6-204ENST00000376491 SSPOA2VEC9 5147 aa7.6□□□□□ -1.19
CLCN6-204ENST00000376491 HSBP1L1C9JCN9 74 aa7.6□□□□□ -1.19
CLCN6-204ENST00000376491 SCGB1D1O95968 90 aa7.6□□□□□ -1.19
CLCN6-204ENST00000376491 CFC1P0CG37 223 aa7.6□□□□□ -1.19
CLCN6-204ENST00000376491 HIST3H2BBQ8N257 126 aa7.6□□□□□ -1.19
CLCN6-204ENST00000376491 HIST1H2BLQ99880 126 aa7.6□□□□□ -1.19
CLCN6-204ENST00000376491 KRTAP9-7A8MTY7 169 aa7.58□□□□□ -1.2
CLCN6-204ENST00000376491 SS18L2Q9UHA2 77 aa7.58□□□□□ -1.2
CLCN6-204ENST00000376491 USH2AO75445 5202 aa7.56□□□□□ -1.2
CLCN6-204ENST00000376491 TEN1Q86WV5 123 aa7.56□□□□□ -1.2
CLCN6-204ENST00000376491 HIST1H4GQ99525 98 aa7.56□□□□□ -1.2
CLCN6-204ENST00000376491 TRBV20-1A0A075B6N2 111 aa7.55□□□□□ -1.2
CLCN6-204ENST00000376491 A0A087WSZ3 146 aa7.55□□□□□ -1.2
CLCN6-204ENST00000376491 S100A2P29034 98 aa7.55□□□□□ -1.2
CLCN6-204ENST00000376491 FAM218AQ96MZ4 157 aa7.55□□□□□ -1.2
CLCN6-204ENST00000376491 KRTAP16-1A8MUX0 517 aa7.54□□□□□ -1.2
CLCN6-204ENST00000376491 NDUFV3P56181 108 aaKnown RBP7.54□□□□□ -1.2
CLCN6-204ENST00000376491 DSCR10P59022 87 aa7.54□□□□□ -1.2
CLCN6-204ENST00000376491 MT2AP02795 61 aa7.52□□□□□ -1.21
CLCN6-204ENST00000376491 COX8AP10176 69 aa7.51□□□□□ -1.21
CLCN6-204ENST00000376491 H0YGX0 51 aa7.49□□□□□ -1.21
CLCN6-204ENST00000376491 H3BMG7 143 aa7.49□□□□□ -1.21
CLCN6-204ENST00000376491 A0A1W2PNM2 257 aa7.48□□□□□ -1.21
CLCN6-204ENST00000376491 RAB37Q96AX2 223 aa7.48□□□□□ -1.21
CLCN6-204ENST00000376491 DLEU1O43261 78 aa7.47□□□□□ -1.21
CLCN6-204ENST00000376491 SNCGO76070 127 aa7.47□□□□□ -1.21
CLCN6-204ENST00000376491 MT1FP04733 61 aa7.47□□□□□ -1.21
CLCN6-204ENST00000376491 A0A0B4J2C4 111 aa7.46□□□□□ -1.22
CLCN6-204ENST00000376491 LCE2BO14633 110 aa7.46□□□□□ -1.22
CLCN6-204ENST00000376491 SIGMAR1Q99720 223 aa7.46□□□□□ -1.22
CLCN6-204ENST00000376491 HRES1P13985 223 aa7.45□□□□□ -1.22
CLCN6-204ENST00000376491 NOTCH2NLQ7Z3S9 236 aa7.45□□□□□ -1.22
CLCN6-204ENST00000376491 MPLKIPQ8TAP9 179 aa7.45□□□□□ -1.22
CLCN6-204ENST00000376491 FAM236DA0A1B0GTK5 79 aa7.44□□□□□ -1.22
CLCN6-204ENST00000376491 S100A6P06703 90 aa7.44□□□□□ -1.22
CLCN6-204ENST00000376491 FAM236CP0DP71 79 aa7.44□□□□□ -1.22
CLCN6-204ENST00000376491 FABP2P12104 132 aa7.44□□□□□ -1.22
CLCN6-204ENST00000376491 LINC00313P59037 77 aa7.44□□□□□ -1.22
CLCN6-204ENST00000376491 C14orf144Q96I85 54 aa7.44□□□□□ -1.22
CLCN6-204ENST00000376491 KRTAP9-3Q9BYQ3 159 aa7.43□□□□□ -1.22
CLCN6-204ENST00000376491 HIGD1BQ9P298 99 aa7.43□□□□□ -1.22
CLCN6-204ENST00000376491 A0A1B0GX51 115 aa7.42□□□□□ -1.22
CLCN6-204ENST00000376491 IGKV4-1P06312 121 aa7.42□□□□□ -1.22
CLCN6-204ENST00000376491 KRTAP19-1Q8IUB9 90 aa7.42□□□□□ -1.22
CLCN6-204ENST00000376491 C2orf91Q6ZV80 131 aa7.41□□□□□ -1.22
CLCN6-204ENST00000376491 FCGBPQ9Y6R7 5405 aaPredicted RBP7.41□□□□□ -1.22
CLCN6-204ENST00000376491 GHRHP01286 108 aa7.4□□□□□ -1.22
CLCN6-204ENST00000376491 RBM12B-AS1Q9P1G2 102 aa7.39□□□□□ -1.23
CLCN6-204ENST00000376491 TRBV7-4A0A0J9YYF1 115 aa7.38□□□□□ -1.23
CLCN6-204ENST00000376491 KRTAP10-10P60014 251 aa7.38□□□□□ -1.23
CLCN6-204ENST00000376491 DEFB116Q30KQ4 102 aa7.38□□□□□ -1.23
CLCN6-204ENST00000376491 CEND1Q8N111 149 aa7.38□□□□□ -1.23
CLCN6-204ENST00000376491 ANKRD29Q8N6D5 301 aa7.38□□□□□ -1.23
CLCN6-204ENST00000376491 LINC00472Q9H8W2 130 aa7.38□□□□□ -1.23
CLCN6-204ENST00000376491 PRO1854Q9UHT4 67 aa7.38□□□□□ -1.23
CLCN6-204ENST00000376491 A0A1B0GV72 72 aa7.37□□□□□ -1.23
CLCN6-204ENST00000376491 TRIAP1O43715 76 aa7.37□□□□□ -1.23
CLCN6-204ENST00000376491 SPATA45Q537H7 98 aa7.37□□□□□ -1.23
CLCN6-204ENST00000376491 PAM16Q9Y3D7 125 aa7.37□□□□□ -1.23
CLCN6-204ENST00000376491 FXYD2P54710 66 aa7.35□□□□□ -1.23
CLCN6-204ENST00000376491 C21orf62-AS1Q17RA5 79 aa7.35□□□□□ -1.23
CLCN6-204ENST00000376491 IGHV6-1A0A0B4J1U7 121 aa7.33□□□□□ -1.24
CLCN6-204ENST00000376491 ORMDL1Q9P0S3 153 aa7.32□□□□□ -1.24
CLCN6-204ENST00000376491 CCKP06307 115 aa7.31□□□□□ -1.24
CLCN6-204ENST00000376491 VAMP8Q9BV40 100 aa7.3□□□□□ -1.24
CLCN6-204ENST00000376491 MACF1Q9UPN3 7388 aaKnown RBP7.3□□□□□ -1.24
CLCN6-204ENST00000376491 DNAL4O96015 105 aa7.29□□□□□ -1.24
CLCN6-204ENST00000376491 TRACP01848 142 aa7.29□□□□□ -1.24
CLCN6-204ENST00000376491 TMEM256-PLSCR3K7ERE1 68 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms