RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 SRRM2Q9UQ35 2752 aaKnown RBP9.2□□□□□ -0.94
TNFRSF1B-201ENST00000376259 ATP5EP56381 51 aaPredicted RBP9.2□□□□□ -0.94
TNFRSF1B-201ENST00000376259 OCR1Q9BZK8 76 aa9.19□□□□□ -0.94
TNFRSF1B-201ENST00000376259 H0Y9P7 68 aa9.19□□□□□ -0.94
TNFRSF1B-201ENST00000376259 BCE1O60756 84 aa9.19□□□□□ -0.94
TNFRSF1B-201ENST00000376259 K7EIL1 84 aa9.18□□□□□ -0.94
TNFRSF1B-201ENST00000376259 FP248Q71RG6 208 aaPredicted RBP9.18□□□□□ -0.94
TNFRSF1B-201ENST00000376259 IGHV6-1A0A0B4J1U7 121 aa9.17□□□□□ -0.94
TNFRSF1B-201ENST00000376259 ANAPC11Q9NYG5 84 aa9.17□□□□□ -0.94
TNFRSF1B-201ENST00000376259 DSCR10P59022 87 aa9.16□□□□□ -0.94
TNFRSF1B-201ENST00000376259 IGLV5-48A0A075B6I7 105 aa9.16□□□□□ -0.94
TNFRSF1B-201ENST00000376259 C1orf64Q8NEQ6 169 aa9.15□□□□□ -0.94
TNFRSF1B-201ENST00000376259 PRO0628Q9UI54 55 aa9.15□□□□□ -0.94
TNFRSF1B-201ENST00000376259 RETNLBQ9BQ08 111 aa9.14□□□□□ -0.95
TNFRSF1B-201ENST00000376259 CSMD3Q7Z407 3707 aa9.14□□□□□ -0.95
TNFRSF1B-201ENST00000376259 CHKB-CPT1BH3BT56 60 aa9.13□□□□□ -0.95
TNFRSF1B-201ENST00000376259 C14orf177Q52M58 125 aa9.12□□□□□ -0.95
TNFRSF1B-201ENST00000376259 C1orf195Q5TG92 126 aa9.12□□□□□ -0.95
TNFRSF1B-201ENST00000376259 C16orf90A8MZG2 172 aa9.11□□□□□ -0.95
TNFRSF1B-201ENST00000376259 KRTAP1-5Q9BYS1 174 aa9.11□□□□□ -0.95
TNFRSF1B-201ENST00000376259 F8WDY8 70 aa9.11□□□□□ -0.95
TNFRSF1B-201ENST00000376259 PRR15LQ9BU68 103 aa9.1□□□□□ -0.95
TNFRSF1B-201ENST00000376259 A8MUN3 132 aa9.09□□□□□ -0.95
TNFRSF1B-201ENST00000376259 MDFIQ99750 246 aa9.08□□□□□ -0.96
TNFRSF1B-201ENST00000376259 CIRBP-AS1Q8TBR5 109 aa9.08□□□□□ -0.96
TNFRSF1B-201ENST00000376259 MOBPQ13875 183 aa9.07□□□□□ -0.96
TNFRSF1B-201ENST00000376259 TLX1NBP0CAT3 122 aa9.07□□□□□ -0.96
TNFRSF1B-201ENST00000376259 A6NED7 52 aa9.06□□□□□ -0.96
TNFRSF1B-201ENST00000376259 KRTAP7-1Q8IUC3 87 aa9.06□□□□□ -0.96
TNFRSF1B-201ENST00000376259 COL7A1Q02388 2944 aa9.03□□□□□ -0.96
TNFRSF1B-201ENST00000376259 hDV103S1A0JD37 113 aa9.02□□□□□ -0.97
TNFRSF1B-201ENST00000376259 LY6G6CO95867 125 aa9.02□□□□□ -0.97
TNFRSF1B-201ENST00000376259 WIPF1O43516 503 aa9.01□□□□□ -0.97
TNFRSF1B-201ENST00000376259 PMAIP1Q13794 54 aa9.01□□□□□ -0.97
TNFRSF1B-201ENST00000376259 SPRR1AP35321 89 aa9□□□□□ -0.97
TNFRSF1B-201ENST00000376259 SPAG11AQ6PDA7 123 aa9□□□□□ -0.97
TNFRSF1B-201ENST00000376259 SPRR4Q96PI1 79 aa9□□□□□ -0.97
TNFRSF1B-201ENST00000376259 PLA2G2DQ9UNK4 145 aa8.99□□□□□ -0.97
TNFRSF1B-201ENST00000376259 TGP01266 2768 aa8.99□□□□□ -0.97
TNFRSF1B-201ENST00000376259 KRTAP11-1Q8IUC1 163 aa8.99□□□□□ -0.97
TNFRSF1B-201ENST00000376259 PRR15Q8IV56 129 aa8.99□□□□□ -0.97
TNFRSF1B-201ENST00000376259 V9GYY9 64 aa8.99□□□□□ -0.97
TNFRSF1B-201ENST00000376259 KRTAP4-16G5E9R7 235 aaPredicted RBP8.99□□□□□ -0.97
TNFRSF1B-201ENST00000376259 TRAV22A0A0B4J277 110 aa8.98□□□□□ -0.97
TNFRSF1B-201ENST00000376259 NBDYA0A0U1RRE5 68 aa8.98□□□□□ -0.97
TNFRSF1B-201ENST00000376259 A8MWP4 228 aa8.96□□□□□ -0.98
TNFRSF1B-201ENST00000376259 PANO1I0J062 215 aa8.96□□□□□ -0.98
TNFRSF1B-201ENST00000376259 TNP2Q05952 138 aa8.96□□□□□ -0.98
TNFRSF1B-201ENST00000376259 A0A1B0GW54 56 aa8.94□□□□□ -0.98
TNFRSF1B-201ENST00000376259 IGLV5-37A0A075B6J1 123 aa8.94□□□□□ -0.98
TNFRSF1B-201ENST00000376259 C9orf163Q8N9P6 203 aa8.93□□□□□ -0.98
TNFRSF1B-201ENST00000376259 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.93□□□□□ -0.98
TNFRSF1B-201ENST00000376259 ANK2Q01484 3957 aa8.93□□□□□ -0.98
TNFRSF1B-201ENST00000376259 IGLV5-52A0A0A0MRZ9 124 aa8.92□□□□□ -0.98
TNFRSF1B-201ENST00000376259 CNBPP62633 177 aaKnown RBP8.9□□□□□ -0.98
TNFRSF1B-201ENST00000376259 APLNQ9ULZ1 77 aa8.89□□□□□ -0.99
TNFRSF1B-201ENST00000376259 RTL8CO15255 209 aa8.88□□□□□ -0.99
TNFRSF1B-201ENST00000376259 NUPR2A6NF83 97 aa8.87□□□□□ -0.99
TNFRSF1B-201ENST00000376259 COA5Q86WW8 74 aa8.87□□□□□ -0.99
TNFRSF1B-201ENST00000376259 PSORS1C2Q9UIG4 136 aa8.86□□□□□ -0.99
TNFRSF1B-201ENST00000376259 ZNF706Q9Y5V0 76 aaPredicted RBP8.84□□□□□ -0.99
TNFRSF1B-201ENST00000376259 C8orf17Q9NRJ1 99 aa8.83□□□□□ -1
TNFRSF1B-201ENST00000376259 A8MU10 97 aa8.83□□□□□ -1
TNFRSF1B-201ENST00000376259 SPINK1P00995 79 aa8.81□□□□□ -1
TNFRSF1B-201ENST00000376259 A0A087WTM6 91 aa8.79□□□□□ -1
TNFRSF1B-201ENST00000376259 C1orf134Q5TEV5 83 aa8.79□□□□□ -1
TNFRSF1B-201ENST00000376259 IGKV2D-30A0A075B6S6 120 aa8.79□□□□□ -1
TNFRSF1B-201ENST00000376259 IGKV2-30P06310 120 aa8.79□□□□□ -1
TNFRSF1B-201ENST00000376259 C4orf48Q5BLP8 95 aa8.79□□□□□ -1
TNFRSF1B-201ENST00000376259 SPACA4Q8TDM5 124 aa8.79□□□□□ -1
TNFRSF1B-201ENST00000376259 LINC00472Q9H8W2 130 aa8.79□□□□□ -1
TNFRSF1B-201ENST00000376259 PRR26Q8N8Z3 221 aa8.78□□□□□ -1
TNFRSF1B-201ENST00000376259 LIMD2Q9BT23 127 aa8.77□□□□□ -1
TNFRSF1B-201ENST00000376259 MMP24-AS1A0A0U1RRL7 71 aa8.77□□□□□ -1.01
TNFRSF1B-201ENST00000376259 MRPL34Q9BQ48 92 aaKnown RBP8.77□□□□□ -1.01
TNFRSF1B-201ENST00000376259 IGLV8-61A0A075B6I0 122 aa8.75□□□□□ -1.01
TNFRSF1B-201ENST00000376259 A0A1B0GVX0 72 aa8.75□□□□□ -1.01
TNFRSF1B-201ENST00000376259 ZCCHC13Q8WW36 166 aaKnown RBP8.74□□□□□ -1.01
TNFRSF1B-201ENST00000376259 A0A087X002 238 aa8.74□□□□□ -1.01
TNFRSF1B-201ENST00000376259 NOTCH2NLQ7Z3S9 236 aa8.74□□□□□ -1.01
TNFRSF1B-201ENST00000376259 FBN3Q75N90 2809 aa8.73□□□□□ -1.01
TNFRSF1B-201ENST00000376259 ZNF861PO60384 105 aa8.73□□□□□ -1.01
TNFRSF1B-201ENST00000376259 DMBT1Q9UGM3 2413 aaPredicted RBP8.72□□□□□ -1.01
TNFRSF1B-201ENST00000376259 SEC61GP60059 68 aa8.72□□□□□ -1.01
TNFRSF1B-201ENST00000376259 LYSTQ99698 3801 aa8.72□□□□□ -1.01
TNFRSF1B-201ENST00000376259 TP53AIP1Q9HCN2 124 aa8.72□□□□□ -1.01
TNFRSF1B-201ENST00000376259 Q1T7F1 81 aa8.72□□□□□ -1.01
TNFRSF1B-201ENST00000376259 CD164Q04900 197 aa8.72□□□□□ -1.01
TNFRSF1B-201ENST00000376259 KRTAP29-1A8MX34 341 aaPredicted RBP8.71□□□□□ -1.02
TNFRSF1B-201ENST00000376259 Q8N9P0 234 aaPredicted RBP8.71□□□□□ -1.02
TNFRSF1B-201ENST00000376259 CYP4F30PQ9H0H9 118 aa8.71□□□□□ -1.02
TNFRSF1B-201ENST00000376259 H3BPC8 53 aa8.7□□□□□ -1.02
TNFRSF1B-201ENST00000376259 Q5VV11 94 aa8.68□□□□□ -1.02
TNFRSF1B-201ENST00000376259 LINC00313P59037 77 aa8.64□□□□□ -1.03
TNFRSF1B-201ENST00000376259 LOC101927531A0A1B0GV80 90 aa8.64□□□□□ -1.03
TNFRSF1B-201ENST00000376259 SPRR1BP22528 89 aa8.63□□□□□ -1.03
TNFRSF1B-201ENST00000376259 SPANXA2-OT1Q8N9U9 137 aa8.63□□□□□ -1.03
TNFRSF1B-201ENST00000376259 WWC2-AS2Q96NR7 200 aa8.62□□□□□ -1.03
TNFRSF1B-201ENST00000376259 IGLV7-43P04211 117 aa8.61□□□□□ -1.03
TNFRSF1B-201ENST00000376259 IGLV7-46A0A075B6I9 117 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms