RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 ZNF861PO60384 105 aa11.52□□□□□ -0.57
PTPDC1-202ENST00000375360 A0A1B0GW54 56 aa11.52□□□□□ -0.57
PTPDC1-202ENST00000375360 K7EQZ3 153 aa11.51□□□□□ -0.57
PTPDC1-202ENST00000375360 PLA2G2DQ9UNK4 145 aa11.49□□□□□ -0.57
PTPDC1-202ENST00000375360 Q8NDZ9 215 aa11.47□□□□□ -0.57
PTPDC1-202ENST00000375360 SMIM26A0A096LP01 95 aa11.46□□□□□ -0.58
PTPDC1-202ENST00000375360 A0A0U1RQV1 116 aa11.45□□□□□ -0.58
PTPDC1-202ENST00000375360 A6NED7 52 aa11.44□□□□□ -0.58
PTPDC1-202ENST00000375360 SERP1Q9Y6X1 66 aa11.44□□□□□ -0.58
PTPDC1-202ENST00000375360 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.43□□□□□ -0.58
PTPDC1-202ENST00000375360 KRTAP1-5Q9BYS1 174 aa11.42□□□□□ -0.58
PTPDC1-202ENST00000375360 LINC00313P59037 77 aa11.42□□□□□ -0.58
PTPDC1-202ENST00000375360 DMBT1Q9UGM3 2413 aaPredicted RBP11.41□□□□□ -0.58
PTPDC1-202ENST00000375360 A0A1W2PNM2 257 aa11.41□□□□□ -0.58
PTPDC1-202ENST00000375360 V9GYY9 64 aa11.4□□□□□ -0.58
PTPDC1-202ENST00000375360 IGLV7-43P04211 117 aa11.39□□□□□ -0.59
PTPDC1-202ENST00000375360 PSPHP1O15172 72 aa11.38□□□□□ -0.59
PTPDC1-202ENST00000375360 A8MWP4 228 aa11.38□□□□□ -0.59
PTPDC1-202ENST00000375360 TRAV22A0A0B4J277 110 aa11.37□□□□□ -0.59
PTPDC1-202ENST00000375360 TP53AIP1Q9HCN2 124 aa11.36□□□□□ -0.59
PTPDC1-202ENST00000375360 Q96NJ1 140 aa11.35□□□□□ -0.59
PTPDC1-202ENST00000375360 SPRR4Q96PI1 79 aa11.35□□□□□ -0.59
PTPDC1-202ENST00000375360 PRR15LQ9BU68 103 aa11.35□□□□□ -0.59
PTPDC1-202ENST00000375360 CELSR1Q9NYQ6 3014 aa11.34□□□□□ -0.59
PTPDC1-202ENST00000375360 SSBP3-AS1Q7Z2R9 100 aa11.33□□□□□ -0.6
PTPDC1-202ENST00000375360 IGLV5-37A0A075B6J1 123 aa11.32□□□□□ -0.6
PTPDC1-202ENST00000375360 PRR15Q8IV56 129 aa11.3□□□□□ -0.6
PTPDC1-202ENST00000375360 SMG1Q96Q15 3661 aaKnown RBP11.29□□□□□ -0.6
PTPDC1-202ENST00000375360 DSCR10P59022 87 aa11.29□□□□□ -0.6
PTPDC1-202ENST00000375360 SVIPQ8NHG7 77 aa11.28□□□□□ -0.6
PTPDC1-202ENST00000375360 OBSCN-AS1Q96MR7 158 aa11.28□□□□□ -0.6
PTPDC1-202ENST00000375360 MRPL34Q9BQ48 92 aaKnown RBP11.28□□□□□ -0.6
PTPDC1-202ENST00000375360 KRTAP26-1Q6PEX3 210 aa11.27□□□□□ -0.61
PTPDC1-202ENST00000375360 IGLV5-48A0A075B6I7 105 aa11.27□□□□□ -0.61
PTPDC1-202ENST00000375360 LINC00304Q8N9R0 145 aa11.27□□□□□ -0.61
PTPDC1-202ENST00000375360 LINC00336Q6ZUF6 198 aa11.26□□□□□ -0.61
PTPDC1-202ENST00000375360 C7orf65Q6ZTY9 151 aa11.25□□□□□ -0.61
PTPDC1-202ENST00000375360 C8orf17Q9NRJ1 99 aa11.24□□□□□ -0.61
PTPDC1-202ENST00000375360 C9orf92A6NGG3 77 aa11.21□□□□□ -0.61
PTPDC1-202ENST00000375360 K7ERS5 55 aa11.21□□□□□ -0.61
PTPDC1-202ENST00000375360 PKD1L1Q8TDX9 2849 aa11.21□□□□□ -0.62
PTPDC1-202ENST00000375360 A0A1B0GVX0 72 aa11.2□□□□□ -0.62
PTPDC1-202ENST00000375360 FLG2Q5D862 2391 aaPredicted RBP11.19□□□□□ -0.62
PTPDC1-202ENST00000375360 FBN1P35555 2871 aaKnown RBP11.19□□□□□ -0.62
PTPDC1-202ENST00000375360 TENM3Q9P273 2699 aa11.19□□□□□ -0.62
PTPDC1-202ENST00000375360 TENM1Q9UKZ4 2725 aa11.18□□□□□ -0.62
PTPDC1-202ENST00000375360 C8orf87E5RJ46 101 aa11.17□□□□□ -0.62
PTPDC1-202ENST00000375360 J3QL48 77 aa11.17□□□□□ -0.62
PTPDC1-202ENST00000375360 SPAG11AQ6PDA7 123 aa11.16□□□□□ -0.62
PTPDC1-202ENST00000375360 H3BPC8 53 aa11.15□□□□□ -0.62
PTPDC1-202ENST00000375360 ACYP2P14621 99 aa11.14□□□□□ -0.63
PTPDC1-202ENST00000375360 SPRR1AP35321 89 aa11.13□□□□□ -0.63
PTPDC1-202ENST00000375360 OTOGQ6ZRI0 2925 aa11.13□□□□□ -0.63
PTPDC1-202ENST00000375360 ATP11AUNQ6ZP68 121 aa11.12□□□□□ -0.63
PTPDC1-202ENST00000375360 LINC01600Q96MT4 127 aa11.12□□□□□ -0.63
PTPDC1-202ENST00000375360 PRR26Q8N8Z3 221 aa11.1□□□□□ -0.63
PTPDC1-202ENST00000375360 CSMD1Q96PZ7 3565 aa11.1□□□□□ -0.63
PTPDC1-202ENST00000375360 LOC101927531A0A1B0GV80 90 aa11.1□□□□□ -0.63
PTPDC1-202ENST00000375360 ZFHX3Q15911 3703 aa11.09□□□□□ -0.63
PTPDC1-202ENST00000375360 PLAC8Q9NZF1 115 aa11.08□□□□□ -0.64
PTPDC1-202ENST00000375360 CUBNO60494 3623 aa11.07□□□□□ -0.64
PTPDC1-202ENST00000375360 PANO1I0J062 215 aa11.07□□□□□ -0.64
PTPDC1-202ENST00000375360 KRTAP10-2P60368 255 aa11.06□□□□□ -0.64
PTPDC1-202ENST00000375360 PDZD2O15018 2839 aa11.06□□□□□ -0.64
PTPDC1-202ENST00000375360 KLKP1Q107X0 134 aa11.05□□□□□ -0.64
PTPDC1-202ENST00000375360 C4orf26Q17RF5 130 aa11.05□□□□□ -0.64
PTPDC1-202ENST00000375360 PMAIP1Q13794 54 aa11.05□□□□□ -0.64
PTPDC1-202ENST00000375360 IGLV8-61A0A075B6I0 122 aa11.04□□□□□ -0.64
PTPDC1-202ENST00000375360 SVEP1Q4LDE5 3571 aa11.04□□□□□ -0.64
PTPDC1-202ENST00000375360 A0A1B0GU69 56 aa11.03□□□□□ -0.64
PTPDC1-202ENST00000375360 VWFP04275 2813 aa11.02□□□□□ -0.65
PTPDC1-202ENST00000375360 RPS28P62857 69 aaKnown RBP11.01□□□□□ -0.65
PTPDC1-202ENST00000375360 H7BZZ5 65 aa11.01□□□□□ -0.65
PTPDC1-202ENST00000375360 NBPF19A0A087WUL8 3843 aa11□□□□□ -0.65
PTPDC1-202ENST00000375360 KRTAP10-1P60331 282 aa10.99□□□□□ -0.65
PTPDC1-202ENST00000375360 COA5Q86WW8 74 aa10.96□□□□□ -0.66
PTPDC1-202ENST00000375360 CSMD2Q7Z408 3487 aa10.93□□□□□ -0.66
PTPDC1-202ENST00000375360 C1orf195Q5TG92 126 aa10.92□□□□□ -0.66
PTPDC1-202ENST00000375360 Q6ZR54 194 aa10.92□□□□□ -0.66
PTPDC1-202ENST00000375360 OCR1Q9BZK8 76 aa10.92□□□□□ -0.66
PTPDC1-202ENST00000375360 LCE6AA0A183 80 aa10.89□□□□□ -0.67
PTPDC1-202ENST00000375360 A8MUN3 132 aa10.89□□□□□ -0.67
PTPDC1-202ENST00000375360 TENM2Q9NT68 2774 aa10.87□□□□□ -0.67
PTPDC1-202ENST00000375360 SPRR1BP22528 89 aa10.87□□□□□ -0.67
PTPDC1-202ENST00000375360 Q8N1X5 172 aa10.86□□□□□ -0.67
PTPDC1-202ENST00000375360 KRTAP4-16G5E9R7 235 aaPredicted RBP10.85□□□□□ -0.67
PTPDC1-202ENST00000375360 CD164Q04900 197 aa10.85□□□□□ -0.67
PTPDC1-202ENST00000375360 FAM229BQ4G0N7 80 aa10.83□□□□□ -0.68
PTPDC1-202ENST00000375360 KRTAP11-1Q8IUC1 163 aa10.82□□□□□ -0.68
PTPDC1-202ENST00000375360 TGP01266 2768 aa10.82□□□□□ -0.68
PTPDC1-202ENST00000375360 SPENQ96T58 3664 aaKnown RBP10.81□□□□□ -0.68
PTPDC1-202ENST00000375360 LINC00472Q9H8W2 130 aa10.8□□□□□ -0.68
PTPDC1-202ENST00000375360 COX6B2Q6YFQ2 88 aa10.8□□□□□ -0.68
PTPDC1-202ENST00000375360 Q6ZRN7 208 aaPredicted RBP10.79□□□□□ -0.68
PTPDC1-202ENST00000375360 MMP24-AS1A0A0U1RRL7 71 aa10.79□□□□□ -0.68
PTPDC1-202ENST00000375360 KRTAP7-1Q8IUC3 87 aa10.77□□□□□ -0.69
PTPDC1-202ENST00000375360 IGLV7-46A0A075B6I9 117 aa10.76□□□□□ -0.69
PTPDC1-202ENST00000375360 PRO0628Q9UI54 55 aa10.73□□□□□ -0.69
PTPDC1-202ENST00000375360 CYSTM1Q9H1C7 97 aa10.73□□□□□ -0.69
PTPDC1-202ENST00000375360 Q8N9P0 234 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms