RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 LINC00474Q9P2X8 69 aa11.32□□□□□ -0.6
TRAF3IP1-201ENST00000373327 IGFL1Q6UW32 110 aa11.31□□□□□ -0.6
TRAF3IP1-201ENST00000373327 KRTAP1-5Q9BYS1 174 aa11.3□□□□□ -0.6
TRAF3IP1-201ENST00000373327 RETNLBQ9BQ08 111 aa11.3□□□□□ -0.6
TRAF3IP1-201ENST00000373327 MOBPQ13875 183 aa11.29□□□□□ -0.6
TRAF3IP1-201ENST00000373327 SMIM26A0A096LP01 95 aa11.27□□□□□ -0.61
TRAF3IP1-201ENST00000373327 PSPHP1O15172 72 aa11.26□□□□□ -0.61
TRAF3IP1-201ENST00000373327 H7BZZ5 65 aa11.25□□□□□ -0.61
TRAF3IP1-201ENST00000373327 H0Y9P7 68 aa11.25□□□□□ -0.61
TRAF3IP1-201ENST00000373327 TLX1NBP0CAT3 122 aa11.24□□□□□ -0.61
TRAF3IP1-201ENST00000373327 CHKB-CPT1BH3BT56 60 aa11.23□□□□□ -0.61
TRAF3IP1-201ENST00000373327 C1orf134Q5TEV5 83 aa11.23□□□□□ -0.61
TRAF3IP1-201ENST00000373327 RTL8CO15255 209 aa11.21□□□□□ -0.61
TRAF3IP1-201ENST00000373327 APLNQ9ULZ1 77 aa11.2□□□□□ -0.62
TRAF3IP1-201ENST00000373327 C4orf48Q5BLP8 95 aa11.19□□□□□ -0.62
TRAF3IP1-201ENST00000373327 ANK3Q12955 4377 aaKnown RBP11.17□□□□□ -0.62
TRAF3IP1-201ENST00000373327 IGLV5-48A0A075B6I7 105 aa11.17□□□□□ -0.62
TRAF3IP1-201ENST00000373327 C9orf163Q8N9P6 203 aa11.17□□□□□ -0.62
TRAF3IP1-201ENST00000373327 ZNF706Q9Y5V0 76 aaPredicted RBP11.16□□□□□ -0.62
TRAF3IP1-201ENST00000373327 ATP5EP56381 51 aaPredicted RBP11.16□□□□□ -0.62
TRAF3IP1-201ENST00000373327 RPS28P62857 69 aaKnown RBP11.15□□□□□ -0.62
TRAF3IP1-201ENST00000373327 KLKP1Q107X0 134 aa11.15□□□□□ -0.62
TRAF3IP1-201ENST00000373327 C1orf64Q8NEQ6 169 aa11.15□□□□□ -0.62
TRAF3IP1-201ENST00000373327 BCE1O60756 84 aa11.14□□□□□ -0.63
TRAF3IP1-201ENST00000373327 PLA2G2DQ9UNK4 145 aa11.14□□□□□ -0.63
TRAF3IP1-201ENST00000373327 TGP01266 2768 aa11.13□□□□□ -0.63
TRAF3IP1-201ENST00000373327 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.11□□□□□ -0.63
TRAF3IP1-201ENST00000373327 hDV103S1A0JD37 113 aa11.1□□□□□ -0.63
TRAF3IP1-201ENST00000373327 DSCR10P59022 87 aa11.1□□□□□ -0.63
TRAF3IP1-201ENST00000373327 V9GYY9 64 aa11.09□□□□□ -0.63
TRAF3IP1-201ENST00000373327 A0A087WTM6 91 aa11.08□□□□□ -0.64
TRAF3IP1-201ENST00000373327 A6NED7 52 aa11.07□□□□□ -0.64
TRAF3IP1-201ENST00000373327 CNBPP62633 177 aaKnown RBP11.07□□□□□ -0.64
TRAF3IP1-201ENST00000373327 IGLV5-37A0A075B6J1 123 aa11.05□□□□□ -0.64
TRAF3IP1-201ENST00000373327 C1orf195Q5TG92 126 aa11.05□□□□□ -0.64
TRAF3IP1-201ENST00000373327 OCR1Q9BZK8 76 aa11.05□□□□□ -0.64
TRAF3IP1-201ENST00000373327 PANO1I0J062 215 aa11.05□□□□□ -0.64
TRAF3IP1-201ENST00000373327 PSORS1C2Q9UIG4 136 aa11.05□□□□□ -0.64
TRAF3IP1-201ENST00000373327 OXTP01178 125 aa11.04□□□□□ -0.64
TRAF3IP1-201ENST00000373327 SPRR1AP35321 89 aa11.04□□□□□ -0.64
TRAF3IP1-201ENST00000373327 KRTAP7-1Q8IUC3 87 aa11.04□□□□□ -0.64
TRAF3IP1-201ENST00000373327 SRRM2Q9UQ35 2752 aaKnown RBP11.02□□□□□ -0.64
TRAF3IP1-201ENST00000373327 AKAP9Q99996 3911 aa11.02□□□□□ -0.65
TRAF3IP1-201ENST00000373327 A0A1B0GW54 56 aa11.02□□□□□ -0.65
TRAF3IP1-201ENST00000373327 PRR15LQ9BU68 103 aa11.02□□□□□ -0.65
TRAF3IP1-201ENST00000373327 A8MWP4 228 aa11.01□□□□□ -0.65
TRAF3IP1-201ENST00000373327 SPACA4Q8TDM5 124 aa11.01□□□□□ -0.65
TRAF3IP1-201ENST00000373327 PRR15Q8IV56 129 aa11□□□□□ -0.65
TRAF3IP1-201ENST00000373327 KRTAP11-1Q8IUC1 163 aa10.99□□□□□ -0.65
TRAF3IP1-201ENST00000373327 TRAV22A0A0B4J277 110 aa10.98□□□□□ -0.65
TRAF3IP1-201ENST00000373327 PMAIP1Q13794 54 aa10.97□□□□□ -0.65
TRAF3IP1-201ENST00000373327 SPRR4Q96PI1 79 aa10.97□□□□□ -0.65
TRAF3IP1-201ENST00000373327 KRTAP4-16G5E9R7 235 aaPredicted RBP10.96□□□□□ -0.65
TRAF3IP1-201ENST00000373327 LINC00336Q6ZUF6 198 aa10.96□□□□□ -0.65
TRAF3IP1-201ENST00000373327 TNP2Q05952 138 aa10.93□□□□□ -0.66
TRAF3IP1-201ENST00000373327 FAM229BQ4G0N7 80 aa10.91□□□□□ -0.66
TRAF3IP1-201ENST00000373327 ZNF861PO60384 105 aa10.91□□□□□ -0.66
TRAF3IP1-201ENST00000373327 SPAG11AQ6PDA7 123 aa10.9□□□□□ -0.66
TRAF3IP1-201ENST00000373327 IGKV2D-30A0A075B6S6 120 aa10.9□□□□□ -0.66
TRAF3IP1-201ENST00000373327 IGKV2-30P06310 120 aa10.9□□□□□ -0.66
TRAF3IP1-201ENST00000373327 A8MUN3 132 aa10.88□□□□□ -0.67
TRAF3IP1-201ENST00000373327 SPINK1P00995 79 aa10.88□□□□□ -0.67
TRAF3IP1-201ENST00000373327 CSMD3Q7Z407 3707 aa10.88□□□□□ -0.67
TRAF3IP1-201ENST00000373327 C8orf17Q9NRJ1 99 aa10.87□□□□□ -0.67
TRAF3IP1-201ENST00000373327 SMR3BP02814 79 aaPredicted RBP10.84□□□□□ -0.67
TRAF3IP1-201ENST00000373327 Q5XG85 94 aa10.82□□□□□ -0.68
TRAF3IP1-201ENST00000373327 SEC61GP60059 68 aa10.81□□□□□ -0.68
TRAF3IP1-201ENST00000373327 PRO0628Q9UI54 55 aa10.81□□□□□ -0.68
TRAF3IP1-201ENST00000373327 FP248Q71RG6 208 aaPredicted RBP10.81□□□□□ -0.68
TRAF3IP1-201ENST00000373327 MRPL34Q9BQ48 92 aaKnown RBP10.81□□□□□ -0.68
TRAF3IP1-201ENST00000373327 A0A1B0GVX0 72 aa10.79□□□□□ -0.68
TRAF3IP1-201ENST00000373327 IGLV7-43P04211 117 aa10.79□□□□□ -0.68
TRAF3IP1-201ENST00000373327 COL7A1Q02388 2944 aa10.78□□□□□ -0.68
TRAF3IP1-201ENST00000373327 TP53AIP1Q9HCN2 124 aa10.77□□□□□ -0.69
TRAF3IP1-201ENST00000373327 PLA2G1BP04054 148 aaKnown RBP10.76□□□□□ -0.69
TRAF3IP1-201ENST00000373327 COA5Q86WW8 74 aa10.76□□□□□ -0.69
TRAF3IP1-201ENST00000373327 LINC00313P59037 77 aa10.75□□□□□ -0.69
TRAF3IP1-201ENST00000373327 WWC2-AS2Q96NR7 200 aa10.74□□□□□ -0.69
TRAF3IP1-201ENST00000373327 TYMSOSQ8TAI1 123 aa10.73□□□□□ -0.69
TRAF3IP1-201ENST00000373327 LINC00472Q9H8W2 130 aa10.72□□□□□ -0.69
TRAF3IP1-201ENST00000373327 DMBT1Q9UGM3 2413 aaPredicted RBP10.72□□□□□ -0.69
TRAF3IP1-201ENST00000373327 MMP24-AS1A0A0U1RRL7 71 aa10.7□□□□□ -0.7
TRAF3IP1-201ENST00000373327 FBN3Q75N90 2809 aa10.68□□□□□ -0.7
TRAF3IP1-201ENST00000373327 KRTAP10-2P60368 255 aa10.68□□□□□ -0.7
TRAF3IP1-201ENST00000373327 H3BPC8 53 aa10.67□□□□□ -0.7
TRAF3IP1-201ENST00000373327 Q96NJ1 140 aa10.67□□□□□ -0.7
TRAF3IP1-201ENST00000373327 IGLV8-61A0A075B6I0 122 aa10.66□□□□□ -0.7
TRAF3IP1-201ENST00000373327 FLG2Q5D862 2391 aaPredicted RBP10.64□□□□□ -0.71
TRAF3IP1-201ENST00000373327 SPRR1BP22528 89 aa10.64□□□□□ -0.71
TRAF3IP1-201ENST00000373327 LIMD2Q9BT23 127 aa10.63□□□□□ -0.71
TRAF3IP1-201ENST00000373327 Q6ZRN7 208 aaPredicted RBP10.63□□□□□ -0.71
TRAF3IP1-201ENST00000373327 PRR26Q8N8Z3 221 aa10.62□□□□□ -0.71
TRAF3IP1-201ENST00000373327 A0A087X002 238 aa10.61□□□□□ -0.71
TRAF3IP1-201ENST00000373327 NOTCH2NLQ7Z3S9 236 aa10.61□□□□□ -0.71
TRAF3IP1-201ENST00000373327 PLAC8Q9NZF1 115 aa10.61□□□□□ -0.71
TRAF3IP1-201ENST00000373327 C7orf65Q6ZTY9 151 aa10.6□□□□□ -0.71
TRAF3IP1-201ENST00000373327 C9orf92A6NGG3 77 aa10.59□□□□□ -0.71
TRAF3IP1-201ENST00000373327 SSBP3-AS1Q7Z2R9 100 aa10.59□□□□□ -0.71
TRAF3IP1-201ENST00000373327 LOC101927531A0A1B0GV80 90 aa10.55□□□□□ -0.72
TRAF3IP1-201ENST00000373327 ACYP2P14621 99 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms