RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 COL7A1Q02388 2944 aa7.98□□□□□ -1.13
CTPS1-202ENST00000372621 PSCAO43653 123 aa7.97□□□□□ -1.13
CTPS1-202ENST00000372621 KRTAP11-1Q8IUC1 163 aa7.97□□□□□ -1.13
CTPS1-202ENST00000372621 HCG22E2RYF7 251 aa7.97□□□□□ -1.13
CTPS1-202ENST00000372621 FAM229BQ4G0N7 80 aa7.96□□□□□ -1.14
CTPS1-202ENST00000372621 STAB2Q8WWQ8 2551 aa7.94□□□□□ -1.14
CTPS1-202ENST00000372621 CSMD3Q7Z407 3707 aa7.94□□□□□ -1.14
CTPS1-202ENST00000372621 H0Y9J4 135 aa7.94□□□□□ -1.14
CTPS1-202ENST00000372621 A0A087WSZ3 146 aa7.93□□□□□ -1.14
CTPS1-202ENST00000372621 SPRR1BP22528 89 aa7.93□□□□□ -1.14
CTPS1-202ENST00000372621 APLNQ9ULZ1 77 aa7.93□□□□□ -1.14
CTPS1-202ENST00000372621 DEFB116Q30KQ4 102 aa7.93□□□□□ -1.14
CTPS1-202ENST00000372621 PHF5AQ7RTV0 110 aaKnown RBP7.93□□□□□ -1.14
CTPS1-202ENST00000372621 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.92□□□□□ -1.14
CTPS1-202ENST00000372621 CHTF8P0CG12 524 aa7.92□□□□□ -1.14
CTPS1-202ENST00000372621 UBE2AP49459 152 aa7.92□□□□□ -1.14
CTPS1-202ENST00000372621 SRRM2Q9UQ35 2752 aaKnown RBP7.91□□□□□ -1.14
CTPS1-202ENST00000372621 C14orf177Q52M58 125 aa7.91□□□□□ -1.14
CTPS1-202ENST00000372621 LINC00336Q6ZUF6 198 aa7.91□□□□□ -1.14
CTPS1-202ENST00000372621 PLECQ15149 4684 aaKnown RBP7.91□□□□□ -1.14
CTPS1-202ENST00000372621 MGAM2Q2M2H8 2515 aa7.89□□□□□ -1.15
CTPS1-202ENST00000372621 UBE2DNLQ8IWF7 75 aa7.89□□□□□ -1.15
CTPS1-202ENST00000372621 KRTAP29-1A8MX34 341 aaPredicted RBP7.89□□□□□ -1.15
CTPS1-202ENST00000372621 C9orf163Q8N9P6 203 aa7.89□□□□□ -1.15
CTPS1-202ENST00000372621 LRCOL1A6NCL2 159 aa7.88□□□□□ -1.15
CTPS1-202ENST00000372621 hDV103S1A0JD37 113 aa7.88□□□□□ -1.15
CTPS1-202ENST00000372621 RPL37AP61513 92 aaKnown RBP7.88□□□□□ -1.15
CTPS1-202ENST00000372621 WFDC13Q8IUB5 93 aa7.87□□□□□ -1.15
CTPS1-202ENST00000372621 LINC00472Q9H8W2 130 aa7.86□□□□□ -1.15
CTPS1-202ENST00000372621 TENM2Q9NT68 2774 aa7.85□□□□□ -1.15
CTPS1-202ENST00000372621 KRTAP13-1Q8IUC0 172 aa7.85□□□□□ -1.15
CTPS1-202ENST00000372621 PRO0628Q9UI54 55 aa7.85□□□□□ -1.15
CTPS1-202ENST00000372621 PRR15Q8IV56 129 aa7.84□□□□□ -1.15
CTPS1-202ENST00000372621 C1orf64Q8NEQ6 169 aa7.84□□□□□ -1.15
CTPS1-202ENST00000372621 PANO1I0J062 215 aa7.84□□□□□ -1.16
CTPS1-202ENST00000372621 MPLKIPQ8TAP9 179 aa7.84□□□□□ -1.16
CTPS1-202ENST00000372621 CYP4F30PQ9H0H9 118 aa7.83□□□□□ -1.16
CTPS1-202ENST00000372621 Q6ZRN7 208 aaPredicted RBP7.83□□□□□ -1.16
CTPS1-202ENST00000372621 A8MWP4 228 aa7.82□□□□□ -1.16
CTPS1-202ENST00000372621 B9D2Q9BPU9 175 aa7.82□□□□□ -1.16
CTPS1-202ENST00000372621 PKIGQ9Y2B9 76 aa7.82□□□□□ -1.16
CTPS1-202ENST00000372621 NBDYA0A0U1RRE5 68 aa7.81□□□□□ -1.16
CTPS1-202ENST00000372621 TRAV22A0A0B4J277 110 aa7.8□□□□□ -1.16
CTPS1-202ENST00000372621 NDUFB1O75438 58 aa7.8□□□□□ -1.16
CTPS1-202ENST00000372621 CASC2Q6XLA1 102 aa7.8□□□□□ -1.16
CTPS1-202ENST00000372621 MP68P56378 58 aa7.8□□□□□ -1.16
CTPS1-202ENST00000372621 VPS13DQ5THJ4 4388 aa7.8□□□□□ -1.16
CTPS1-202ENST00000372621 HECTD4Q9Y4D8 3996 aa7.79□□□□□ -1.16
CTPS1-202ENST00000372621 STARD9Q9P2P6 4700 aa7.78□□□□□ -1.16
CTPS1-202ENST00000372621 Q1T7F1 81 aa7.77□□□□□ -1.17
CTPS1-202ENST00000372621 LINC00208Q96KT6 92 aa7.77□□□□□ -1.17
CTPS1-202ENST00000372621 SPACA4Q8TDM5 124 aa7.76□□□□□ -1.17
CTPS1-202ENST00000372621 H3BPC8 53 aa7.76□□□□□ -1.17
CTPS1-202ENST00000372621 MDFIQ99750 246 aa7.76□□□□□ -1.17
CTPS1-202ENST00000372621 PRKDCP78527 4128 aaKnown RBP7.76□□□□□ -1.17
CTPS1-202ENST00000372621 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.76□□□□□ -1.17
CTPS1-202ENST00000372621 H0Y9P7 68 aa7.75□□□□□ -1.17
CTPS1-202ENST00000372621 PRR4Q16378 134 aa7.75□□□□□ -1.17
CTPS1-202ENST00000372621 MMP24-AS1A0A0U1RRL7 71 aa7.75□□□□□ -1.17
CTPS1-202ENST00000372621 Q96NJ1 140 aa7.74□□□□□ -1.17
CTPS1-202ENST00000372621 FRAS1Q86XX4 4008 aa7.74□□□□□ -1.17
CTPS1-202ENST00000372621 LINC00483Q53H64 154 aa7.73□□□□□ -1.17
CTPS1-202ENST00000372621 SPANXA2-OT1Q8N9U9 137 aa7.73□□□□□ -1.17
CTPS1-202ENST00000372621 NUPR2A6NF83 97 aa7.73□□□□□ -1.17
CTPS1-202ENST00000372621 DNAH8Q96JB1 4490 aa7.73□□□□□ -1.17
CTPS1-202ENST00000372621 BRK1Q8WUW1 75 aa7.73□□□□□ -1.17
CTPS1-202ENST00000372621 ASB16-AS1Q495Z4 193 aa7.72□□□□□ -1.17
CTPS1-202ENST00000372621 DNAH2Q9P225 4427 aa7.71□□□□□ -1.18
CTPS1-202ENST00000372621 DNAH17Q9UFH2 4485 aa7.7□□□□□ -1.18
CTPS1-202ENST00000372621 IGLV9-49A0A0B4J1Y8 123 aa7.7□□□□□ -1.18
CTPS1-202ENST00000372621 KMT2AQ03164 3969 aa7.69□□□□□ -1.18
CTPS1-202ENST00000372621 A0A087WTM6 91 aa7.68□□□□□ -1.18
CTPS1-202ENST00000372621 MOBPQ13875 183 aa7.67□□□□□ -1.18
CTPS1-202ENST00000372621 WWC2-AS2Q96NR7 200 aa7.67□□□□□ -1.18
CTPS1-202ENST00000372621 IGLV5-52A0A0A0MRZ9 124 aa7.65□□□□□ -1.18
CTPS1-202ENST00000372621 PSORS1C2Q9UIG4 136 aa7.65□□□□□ -1.19
CTPS1-202ENST00000372621 ZNF706Q9Y5V0 76 aaPredicted RBP7.64□□□□□ -1.19
CTPS1-202ENST00000372621 C8orf17Q9NRJ1 99 aa7.64□□□□□ -1.19
CTPS1-202ENST00000372621 TP53AIP1Q9HCN2 124 aa7.63□□□□□ -1.19
CTPS1-202ENST00000372621 RTL8CO15255 209 aa7.63□□□□□ -1.19
CTPS1-202ENST00000372621 PLAC8Q9NZF1 115 aa7.63□□□□□ -1.19
CTPS1-202ENST00000372621 PSPHP1O15172 72 aa7.62□□□□□ -1.19
CTPS1-202ENST00000372621 Q6ZR54 194 aa7.62□□□□□ -1.19
CTPS1-202ENST00000372621 IGLV7-46A0A075B6I9 117 aa7.61□□□□□ -1.19
CTPS1-202ENST00000372621 A0A1B0GVX0 72 aa7.61□□□□□ -1.19
CTPS1-202ENST00000372621 ZNF861PO60384 105 aa7.61□□□□□ -1.19
CTPS1-202ENST00000372621 V9GYY9 64 aa7.61□□□□□ -1.19
CTPS1-202ENST00000372621 FBN3Q75N90 2809 aa7.6□□□□□ -1.19
CTPS1-202ENST00000372621 ANAPC11Q9NYG5 84 aa7.59□□□□□ -1.19
CTPS1-202ENST00000372621 ALMS1Q8TCU4 4167 aa7.59□□□□□ -1.19
CTPS1-202ENST00000372621 IGHV6-1A0A0B4J1U7 121 aa7.58□□□□□ -1.2
CTPS1-202ENST00000372621 Q8N9P0 234 aaPredicted RBP7.58□□□□□ -1.2
CTPS1-202ENST00000372621 A8MUN3 132 aa7.57□□□□□ -1.2
CTPS1-202ENST00000372621 CD164Q04900 197 aa7.57□□□□□ -1.2
CTPS1-202ENST00000372621 Q5VV11 94 aa7.56□□□□□ -1.2
CTPS1-202ENST00000372621 A0A087X002 238 aa7.56□□□□□ -1.2
CTPS1-202ENST00000372621 NOTCH2NLQ7Z3S9 236 aa7.56□□□□□ -1.2
CTPS1-202ENST00000372621 C1orf195Q5TG92 126 aa7.55□□□□□ -1.2
CTPS1-202ENST00000372621 MRPL34Q9BQ48 92 aaKnown RBP7.55□□□□□ -1.2
CTPS1-202ENST00000372621 COA5Q86WW8 74 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms