RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 SMIM2Q9BVW6 85 aa3.76□□□□□ -1.81
H3F3A-201ENST00000366813 MRPL35Q9NZE8 188 aaKnown RBP3.76□□□□□ -1.81
H3F3A-201ENST00000366813 MYMXA0A1B0GTQ4 84 aa3.75□□□□□ -1.81
H3F3A-201ENST00000366813 SMKR1H3BMG3 65 aa3.75□□□□□ -1.81
H3F3A-201ENST00000366813 LYRM7Q5U5X0 104 aa3.75□□□□□ -1.81
H3F3A-201ENST00000366813 C3orf22Q8N5N4 141 aa3.75□□□□□ -1.81
H3F3A-201ENST00000366813 RAB37Q96AX2 223 aa3.75□□□□□ -1.81
H3F3A-201ENST00000366813 NHP2Q9NX24 153 aaKnown RBP3.75□□□□□ -1.81
H3F3A-201ENST00000366813 TRBV20-1A0A075B6N2 111 aa3.74□□□□□ -1.81
H3F3A-201ENST00000366813 M0QY20 66 aa3.74□□□□□ -1.81
H3F3A-201ENST00000366813 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.73□□□□□ -1.81
H3F3A-201ENST00000366813 IGKV2-29A2NJV5 120 aaPredicted RBP3.73□□□□□ -1.81
H3F3A-201ENST00000366813 K7ERJ3 54 aa3.73□□□□□ -1.81
H3F3A-201ENST00000366813 SPAG11AQ6PDA7 123 aa3.73□□□□□ -1.81
H3F3A-201ENST00000366813 PP632Q6XCG6 107 aa3.73□□□□□ -1.81
H3F3A-201ENST00000366813 TIMM17AQ99595 171 aa3.73□□□□□ -1.81
H3F3A-201ENST00000366813 TRBV6-5A0A0K0K1A5 114 aa3.72□□□□□ -1.81
H3F3A-201ENST00000366813 IGIPA6NJ69 53 aa3.72□□□□□ -1.81
H3F3A-201ENST00000366813 BCE1O60756 84 aa3.72□□□□□ -1.81
H3F3A-201ENST00000366813 MT2AP02795 61 aa3.72□□□□□ -1.81
H3F3A-201ENST00000366813 POLR2KP53803 58 aaKnown RBP3.72□□□□□ -1.81
H3F3A-201ENST00000366813 ETDBQ3ZM63 59 aa3.72□□□□□ -1.81
H3F3A-201ENST00000366813 TEN1Q86WV5 123 aa3.72□□□□□ -1.81
H3F3A-201ENST00000366813 PPDPFLQ8WWR9 84 aa3.72□□□□□ -1.81
H3F3A-201ENST00000366813 TMEM141Q96I45 108 aa3.72□□□□□ -1.81
H3F3A-201ENST00000366813 NAA38Q9BRA0 125 aaKnown RBP3.72□□□□□ -1.81
H3F3A-201ENST00000366813 TTTY13Q9BZ97 58 aa3.72□□□□□ -1.81
H3F3A-201ENST00000366813 CYSLTR1Q9Y271 337 aa3.72□□□□□ -1.81
H3F3A-201ENST00000366813 C11orf86A6NJI1 115 aa3.71□□□□□ -1.81
H3F3A-201ENST00000366813 COX7A2LO14548 114 aa3.71□□□□□ -1.81
H3F3A-201ENST00000366813 MGPP08493 103 aa3.71□□□□□ -1.81
H3F3A-201ENST00000366813 KRTAP2-3P0C7H8 128 aa3.71□□□□□ -1.81
H3F3A-201ENST00000366813 UBE2AP49459 152 aa3.71□□□□□ -1.81
H3F3A-201ENST00000366813 DEFB116Q30KQ4 102 aa3.71□□□□□ -1.81
H3F3A-201ENST00000366813 SCGB3A1Q96QR1 104 aa3.71□□□□□ -1.81
H3F3A-201ENST00000366813 KRTAP2-4Q9BYR9 128 aa3.71□□□□□ -1.81
H3F3A-201ENST00000366813 SPANXA1Q9NS26 97 aa3.71□□□□□ -1.81
H3F3A-201ENST00000366813 TRBV27A0A0K0K1C4 114 aa3.7□□□□□ -1.82
H3F3A-201ENST00000366813 TLX1NBP0CAT3 122 aa3.7□□□□□ -1.82
H3F3A-201ENST00000366813 SPAG11BQ08648 103 aa3.7□□□□□ -1.82
H3F3A-201ENST00000366813 SMAGPQ0VAQ4 97 aa3.7□□□□□ -1.82
H3F3A-201ENST00000366813 SPANXN1Q5VSR9 72 aa3.7□□□□□ -1.82
H3F3A-201ENST00000366813 Q6Q795 121 aa3.7□□□□□ -1.82
H3F3A-201ENST00000366813 C5orf38Q86SI9 138 aa3.7□□□□□ -1.82
H3F3A-201ENST00000366813 AMELXQ99217 191 aa3.7□□□□□ -1.82
H3F3A-201ENST00000366813 C6orf48Q9UBA6 75 aa3.7□□□□□ -1.82
H3F3A-201ENST00000366813 CSDC2Q9Y534 153 aaKnown RBP3.7□□□□□ -1.82
H3F3A-201ENST00000366813 A0A0B4J2C4 111 aa3.7□□□□□ -1.82
H3F3A-201ENST00000366813 SDHAF1A6NFY7 115 aa3.7□□□□□ -1.82
H3F3A-201ENST00000366813 ZNF815PA8K554 130 aa3.7□□□□□ -1.82
H3F3A-201ENST00000366813 MT1FP04733 61 aa3.7□□□□□ -1.82
H3F3A-201ENST00000366813 CKS1BP61024 79 aa3.7□□□□□ -1.82
H3F3A-201ENST00000366813 PMVKQ15126 192 aa3.7□□□□□ -1.82
H3F3A-201ENST00000366813 UNQ6190/PRO20217Q6UXQ8 127 aa3.7□□□□□ -1.82
H3F3A-201ENST00000366813 Q6ZUT4 128 aa3.7□□□□□ -1.82
H3F3A-201ENST00000366813 C22orf24Q9Y442 160 aa3.7□□□□□ -1.82
H3F3A-201ENST00000366813 MDN1Q9NU22 5596 aa3.69□□□□□ -1.82
H3F3A-201ENST00000366813 NDUFA12Q9UI09 145 aa3.69□□□□□ -1.82
H3F3A-201ENST00000366813 ERG28Q9UKR5 140 aa3.69□□□□□ -1.82
H3F3A-201ENST00000366813 LEPROTO15243 131 aa3.68□□□□□ -1.82
H3F3A-201ENST00000366813 TCL1BO95988 128 aa3.68□□□□□ -1.82
H3F3A-201ENST00000366813 SPINK8P0C7L1 97 aa3.68□□□□□ -1.82
H3F3A-201ENST00000366813 KRTAP13-1Q8IUC0 172 aa3.68□□□□□ -1.82
H3F3A-201ENST00000366813 PLEKHB2Q96CS7 222 aa3.68□□□□□ -1.82
H3F3A-201ENST00000366813 SPANXDQ9BXN6 97 aa3.68□□□□□ -1.82
H3F3A-201ENST00000366813 GEMIN7Q9H840 131 aaKnown RBP3.68□□□□□ -1.82
H3F3A-201ENST00000366813 PRO1854Q9UHT4 67 aa3.68□□□□□ -1.82
H3F3A-201ENST00000366813 TRBV30A0A0K0K1B3 111 aa3.67□□□□□ -1.82
H3F3A-201ENST00000366813 FAM240AA0A1B0GVK7 77 aa3.67□□□□□ -1.82
H3F3A-201ENST00000366813 TMEM223A0PJW6 202 aa3.67□□□□□ -1.82
H3F3A-201ENST00000366813 NDUFA1O15239 70 aa3.67□□□□□ -1.82
H3F3A-201ENST00000366813 SCGB1D4Q6XE38 83 aa3.67□□□□□ -1.82
H3F3A-201ENST00000366813 RPL39LQ96EH5 51 aaKnown RBP3.67□□□□□ -1.82
H3F3A-201ENST00000366813 LCE3DQ9BYE3 92 aa3.67□□□□□ -1.82
H3F3A-201ENST00000366813 J3QQQ9 107 aa3.66□□□□□ -1.82
H3F3A-201ENST00000366813 TIMM17BO60830 172 aa3.66□□□□□ -1.82
H3F3A-201ENST00000366813 MT-ATP8P03928 68 aa3.66□□□□□ -1.82
H3F3A-201ENST00000366813 SCGB1C2P0DMR2 95 aa3.66□□□□□ -1.82
H3F3A-201ENST00000366813 TSPEAR-AS2P59090 65 aa3.66□□□□□ -1.82
H3F3A-201ENST00000366813 CDC42SE2Q9NRR3 84 aa3.66□□□□□ -1.82
H3F3A-201ENST00000366813 TRBV10-2A0A0K0K1G8 114 aa3.65□□□□□ -1.83
H3F3A-201ENST00000366813 H3BT86 120 aa3.65□□□□□ -1.83
H3F3A-201ENST00000366813 SLC25A20O43772 301 aa3.65□□□□□ -1.83
H3F3A-201ENST00000366813 SPINK1P00995 79 aa3.65□□□□□ -1.83
H3F3A-201ENST00000366813 PSMB2P49721 201 aa3.65□□□□□ -1.83
H3F3A-201ENST00000366813 MRPS36P82909 103 aaKnown RBP3.65□□□□□ -1.83
H3F3A-201ENST00000366813 ANKRD29Q8N6D5 301 aa3.65□□□□□ -1.83
H3F3A-201ENST00000366813 SPANXCQ9NY87 97 aa3.65□□□□□ -1.83
H3F3A-201ENST00000366813 LOC107984156A0A0G2JMH3 177 aa3.64□□□□□ -1.83
H3F3A-201ENST00000366813 C9orf92A6NGG3 77 aa3.64□□□□□ -1.83
H3F3A-201ENST00000366813 NDUFC2-KCTD14E9PQ53 114 aa3.64□□□□□ -1.83
H3F3A-201ENST00000366813 IFITM1P13164 125 aa3.64□□□□□ -1.83
H3F3A-201ENST00000366813 ZNF22P17026 224 aaPredicted RBP3.64□□□□□ -1.83
H3F3A-201ENST00000366813 LGALS3P17931 250 aaKnown RBP3.64□□□□□ -1.83
H3F3A-201ENST00000366813 KRTAP10-10P60014 251 aa3.64□□□□□ -1.83
H3F3A-201ENST00000366813 ATXN8Q156A1 80 aa3.64□□□□□ -1.83
H3F3A-201ENST00000366813 RNASE13Q5GAN3 156 aaKnown RBP3.64□□□□□ -1.83
H3F3A-201ENST00000366813 MRPL55Q7Z7F7 128 aaKnown RBP3.64□□□□□ -1.83
H3F3A-201ENST00000366813 ARL17AQ8IVW1 177 aa3.64□□□□□ -1.83
H3F3A-201ENST00000366813 IGKV2-28A0A075B6P5 120 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms