RNA–Protein interactions for RNA: ENST00000363858.1

RNU6-271P-201, Transcript of RNA, U6 small nuclear 271, pseudogene, humanhuman

BASIC

Gene RNU6-271P, Length 105 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-271P-201ENST00000363858 LYNX1G3V0Z9 82 aa0.28□□□□□ -2.36
RNU6-271P-201ENST00000363858 H0YAA0 97 aa0.28□□□□□ -2.36
RNU6-271P-201ENST00000363858 M0R2T5 61 aa0.28□□□□□ -2.36
RNU6-271P-201ENST00000363858 DEFB135Q30KP9 77 aa0.28□□□□□ -2.36
RNU6-271P-201ENST00000363858 AKAP13Q12802 2813 aa0.28□□□□□ -2.36
RNU6-271P-201ENST00000363858 EP300Q09472 2414 aaPredicted RBP0.28□□□□□ -2.36
RNU6-271P-201ENST00000363858 HECTD1Q9ULT8 2610 aa0.28□□□□□ -2.37
RNU6-271P-201ENST00000363858 PKD1L1Q8TDX9 2849 aa0.28□□□□□ -2.37
RNU6-271P-201ENST00000363858 CHD8Q9HCK8 2581 aa0.27□□□□□ -2.37
RNU6-271P-201ENST00000363858 SETXQ7Z333 2677 aaKnown RBP0.27□□□□□ -2.37
RNU6-271P-201ENST00000363858 TENM3Q9P273 2699 aa0.27□□□□□ -2.37
RNU6-271P-201ENST00000363858 FCER1GP30273 86 aa0.27□□□□□ -2.37
RNU6-271P-201ENST00000363858 MINOS1Q5TGZ0 78 aa0.27□□□□□ -2.37
RNU6-271P-201ENST00000363858 GLI2P10070 1586 aa0.27□□□□□ -2.37
RNU6-271P-201ENST00000363858 CSMD3Q7Z407 3707 aa0.26□□□□□ -2.37
RNU6-271P-201ENST00000363858 KNL1Q8NG31 2342 aa0.26□□□□□ -2.37
RNU6-271P-201ENST00000363858 MAP1BP46821 2468 aaKnown RBP0.26□□□□□ -2.37
RNU6-271P-201ENST00000363858 M0R1W7 72 aa0.26□□□□□ -2.37
RNU6-271P-201ENST00000363858 ADCY10Q96PN6 1610 aa0.26□□□□□ -2.37
RNU6-271P-201ENST00000363858 MAST4O15021 2626 aa0.26□□□□□ -2.37
RNU6-271P-201ENST00000363858 DSPP15924 2871 aaKnown RBP0.25□□□□□ -2.37
RNU6-271P-201ENST00000363858 PRRC2CQ9Y520 2896 aaKnown RBP0.25□□□□□ -2.37
RNU6-271P-201ENST00000363858 CACNA1AO00555 2505 aa0.25□□□□□ -2.37
RNU6-271P-201ENST00000363858 PDE4DIPQ5VU43 2346 aa0.25□□□□□ -2.37
RNU6-271P-201ENST00000363858 CSPG4Q6UVK1 2322 aa0.25□□□□□ -2.37
RNU6-271P-201ENST00000363858 ITSN2Q9NZM3 1697 aa0.25□□□□□ -2.37
RNU6-271P-201ENST00000363858 ABCA5Q8WWZ7 1642 aa0.25□□□□□ -2.37
RNU6-271P-201ENST00000363858 CLASP1Q7Z460 1538 aa0.25□□□□□ -2.37
RNU6-271P-201ENST00000363858 TNXBP22105 4242 aa0.25□□□□□ -2.37
RNU6-271P-201ENST00000363858 CRIP1P50238 77 aa0.25□□□□□ -2.37
RNU6-271P-201ENST00000363858 TMEM167BQ9NRX6 74 aa0.25□□□□□ -2.37
RNU6-271P-201ENST00000363858 C6orf48Q9UBA6 75 aa0.25□□□□□ -2.37
RNU6-271P-201ENST00000363858 WNK1Q9H4A3 2382 aa0.25□□□□□ -2.37
RNU6-271P-201ENST00000363858 FLNCQ14315 2725 aa0.24□□□□□ -2.37
RNU6-271P-201ENST00000363858 DEFB130BP0DP73 79 aa0.24□□□□□ -2.37
RNU6-271P-201ENST00000363858 DEFB130AP0DP74 79 aa0.24□□□□□ -2.37
RNU6-271P-201ENST00000363858 PLNP26678 52 aa0.24□□□□□ -2.37
RNU6-271P-201ENST00000363858 CDC42BPAQ5VT25 1732 aa0.24□□□□□ -2.37
RNU6-271P-201ENST00000363858 MROH2AA6NES4 1674 aa0.24□□□□□ -2.37
RNU6-271P-201ENST00000363858 ABCC8Q09428 1581 aa0.23□□□□□ -2.37
RNU6-271P-201ENST00000363858 FANCD2Q9BXW9 1451 aa0.23□□□□□ -2.37
RNU6-271P-201ENST00000363858 H3BUA1 57 aa0.23□□□□□ -2.37
RNU6-271P-201ENST00000363858 DEFB106AQ8N104 65 aa0.23□□□□□ -2.37
RNU6-271P-201ENST00000363858 FLNAP21333 2647 aaKnown RBP0.23□□□□□ -2.37
RNU6-271P-201ENST00000363858 DCHS2Q6V1P9 2916 aa0.23□□□□□ -2.37
RNU6-271P-201ENST00000363858 CEP290O15078 2479 aa0.22□□□□□ -2.37
RNU6-271P-201ENST00000363858 IGIPA6NJ69 53 aa0.22□□□□□ -2.37
RNU6-271P-201ENST00000363858 H0YGX0 51 aa0.22□□□□□ -2.37
RNU6-271P-201ENST00000363858 PRM1P04553 51 aa0.22□□□□□ -2.37
RNU6-271P-201ENST00000363858 SPRR2DP22532 72 aa0.22□□□□□ -2.37
RNU6-271P-201ENST00000363858 KRTAP21-1Q3LI58 79 aa0.22□□□□□ -2.37
RNU6-271P-201ENST00000363858 TIMM8BQ9Y5J9 83 aaPredicted RBP0.22□□□□□ -2.37
RNU6-271P-201ENST00000363858 NSD1Q96L73 2696 aaPredicted RBP0.22□□□□□ -2.37
RNU6-271P-201ENST00000363858 KMT2AQ03164 3969 aa0.22□□□□□ -2.37
RNU6-271P-201ENST00000363858 DMBT1Q9UGM3 2413 aaPredicted RBP0.22□□□□□ -2.37
RNU6-271P-201ENST00000363858 TOGARAM1Q9Y4F4 1720 aa0.21□□□□□ -2.38
RNU6-271P-201ENST00000363858 FLNBO75369 2602 aaKnown RBP0.21□□□□□ -2.38
RNU6-271P-201ENST00000363858 NF1P21359 2839 aa0.21□□□□□ -2.38
RNU6-271P-201ENST00000363858 NRXN3Q9Y4C0 1643 aa0.21□□□□□ -2.38
RNU6-271P-201ENST00000363858 LRP1Q07954 4544 aaKnown RBP0.21□□□□□ -2.38
RNU6-271P-201ENST00000363858 RPS27P42677 84 aaKnown RBP0.21□□□□□ -2.38
RNU6-271P-201ENST00000363858 PRLHP81277 87 aa0.21□□□□□ -2.38
RNU6-271P-201ENST00000363858 WT1-ASQ06250 92 aa0.21□□□□□ -2.38
RNU6-271P-201ENST00000363858 RPS27LQ71UM5 84 aaKnown RBP0.21□□□□□ -2.38
RNU6-271P-201ENST00000363858 CMC2Q9NRP2 79 aa0.21□□□□□ -2.38
RNU6-271P-201ENST00000363858 HUWE1Q7Z6Z7 4374 aaKnown RBP0.21□□□□□ -2.38
RNU6-271P-201ENST00000363858 HRNRQ86YZ3 2850 aaPredicted RBP0.21□□□□□ -2.38
RNU6-271P-201ENST00000363858 APC2O95996 2303 aa0.21□□□□□ -2.38
RNU6-271P-201ENST00000363858 ANKRD36CQ5JPF3 1778 aa0.21□□□□□ -2.38
RNU6-271P-201ENST00000363858 CELSR1Q9NYQ6 3014 aa0.21□□□□□ -2.38
RNU6-271P-201ENST00000363858 TNRC18O15417 2968 aaPredicted RBP0.21□□□□□ -2.38
RNU6-271P-201ENST00000363858 PRKDCP78527 4128 aaKnown RBP0.2□□□□□ -2.38
RNU6-271P-201ENST00000363858 EFCAB6Q5THR3 1501 aa0.2□□□□□ -2.38
RNU6-271P-201ENST00000363858 NOP10Q9NPE3 64 aaKnown RBP0.2□□□□□ -2.38
RNU6-271P-201ENST00000363858 ABRACLQ9P1F3 81 aa0.2□□□□□ -2.38
RNU6-271P-201ENST00000363858 S4R3F8 94 aa0.2□□□□□ -2.38
RNU6-271P-201ENST00000363858 ACANP16112 2415 aa0.2□□□□□ -2.38
RNU6-271P-201ENST00000363858 PCNX1Q96RV3 2341 aa0.2□□□□□ -2.38
RNU6-271P-201ENST00000363858 SETD2Q9BYW2 2564 aaPredicted RBP0.19□□□□□ -2.38
RNU6-271P-201ENST00000363858 AGLP35573 1532 aa0.19□□□□□ -2.38
RNU6-271P-201ENST00000363858 SNRPGP15A8MWD9 76 aa0.19□□□□□ -2.38
RNU6-271P-201ENST00000363858 PHGR1C9JFL3 82 aa0.19□□□□□ -2.38
RNU6-271P-201ENST00000363858 SPRR2BP35325 72 aa0.19□□□□□ -2.38
RNU6-271P-201ENST00000363858 LINC00308Q8TCZ7 52 aa0.19□□□□□ -2.38
RNU6-271P-201ENST00000363858 COL7A1Q02388 2944 aa0.19□□□□□ -2.38
RNU6-271P-201ENST00000363858 A0A1B0GUL6 1792 aa0.19□□□□□ -2.38
RNU6-271P-201ENST00000363858 MAP1AP78559 2803 aaPredicted RBP0.19□□□□□ -2.38
RNU6-271P-201ENST00000363858 MYCBP2O75592 4640 aa0.18□□□□□ -2.38
RNU6-271P-201ENST00000363858 ZZEF1O43149 2961 aa0.18□□□□□ -2.38
RNU6-271P-201ENST00000363858 LMO7Q8WWI1 1683 aa0.18□□□□□ -2.38
RNU6-271P-201ENST00000363858 COL6A3P12111 3177 aa0.18□□□□□ -2.38
RNU6-271P-201ENST00000363858 PKD1L2Q7Z442 2459 aa0.18□□□□□ -2.38
RNU6-271P-201ENST00000363858 C9orf92A6NGG3 77 aa0.18□□□□□ -2.38
RNU6-271P-201ENST00000363858 TENM2Q9NT68 2774 aa0.18□□□□□ -2.38
RNU6-271P-201ENST00000363858 IQGAP2Q13576 1575 aa0.18□□□□□ -2.38
RNU6-271P-201ENST00000363858 GCN1Q92616 2671 aaKnown RBP0.18□□□□□ -2.38
RNU6-271P-201ENST00000363858 HTTP42858 3142 aa0.18□□□□□ -2.38
RNU6-271P-201ENST00000363858 SPTBN4Q9H254 2564 aa0.17□□□□□ -2.38
RNU6-271P-201ENST00000363858 BSNQ9UPA5 3926 aa0.17□□□□□ -2.38
RNU6-271P-201ENST00000363858 NBASA2RRP1 2371 aa0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms