RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 DNAH14Q0VDD8 3507 aa6.77□□□□□ -1.33
CLIP1-203ENST00000361654 FP248Q71RG6 208 aaPredicted RBP6.77□□□□□ -1.33
CLIP1-203ENST00000361654 UNC80Q8N2C7 3258 aa6.77□□□□□ -1.33
CLIP1-203ENST00000361654 R4GN34 69 aa6.76□□□□□ -1.33
CLIP1-203ENST00000361654 ITPR3Q14573 2671 aa6.76□□□□□ -1.33
CLIP1-203ENST00000361654 FLG2Q5D862 2391 aaPredicted RBP6.76□□□□□ -1.33
CLIP1-203ENST00000361654 LCA10Q71F78 164 aa6.74□□□□□ -1.33
CLIP1-203ENST00000361654 SETXQ7Z333 2677 aaKnown RBP6.74□□□□□ -1.33
CLIP1-203ENST00000361654 DMAC1Q96GE9 116 aa6.73□□□□□ -1.33
CLIP1-203ENST00000361654 KTN1-AS1Q86SY8 53 aa6.72□□□□□ -1.33
CLIP1-203ENST00000361654 SPINK7P58062 85 aa6.72□□□□□ -1.33
CLIP1-203ENST00000361654 OCR1Q9BZK8 76 aa6.71□□□□□ -1.34
CLIP1-203ENST00000361654 PLAC4Q8WY50 150 aa6.7□□□□□ -1.34
CLIP1-203ENST00000361654 CR1P17927 2039 aa6.7□□□□□ -1.34
CLIP1-203ENST00000361654 RANBP2P49792 3224 aaKnown RBP6.69□□□□□ -1.34
CLIP1-203ENST00000361654 TNRC18O15417 2968 aaPredicted RBP6.69□□□□□ -1.34
CLIP1-203ENST00000361654 SPRR1BP22528 89 aa6.68□□□□□ -1.34
CLIP1-203ENST00000361654 KRTAP10-1P60331 282 aa6.68□□□□□ -1.34
CLIP1-203ENST00000361654 SPRR1AP35321 89 aa6.67□□□□□ -1.34
CLIP1-203ENST00000361654 MMP24-AS1A0A0U1RRL7 71 aa6.66□□□□□ -1.34
CLIP1-203ENST00000361654 TRIOO75962 3097 aa6.65□□□□□ -1.34
CLIP1-203ENST00000361654 CFAP46Q8IYW2 2715 aa6.65□□□□□ -1.34
CLIP1-203ENST00000361654 TRANK1O15050 2925 aa6.65□□□□□ -1.34
CLIP1-203ENST00000361654 XIRP2A4UGR9 3374 aa6.65□□□□□ -1.35
CLIP1-203ENST00000361654 CDH23Q9H251 3354 aa6.63□□□□□ -1.35
CLIP1-203ENST00000361654 Q8N9P0 234 aaPredicted RBP6.63□□□□□ -1.35
CLIP1-203ENST00000361654 KRTAP10-2P60368 255 aa6.62□□□□□ -1.35
CLIP1-203ENST00000361654 Q5W150 140 aa6.62□□□□□ -1.35
CLIP1-203ENST00000361654 A0A0A0MQY5 61 aa6.61□□□□□ -1.35
CLIP1-203ENST00000361654 KRTAP1-5Q9BYS1 174 aa6.6□□□□□ -1.35
CLIP1-203ENST00000361654 TEP1Q99973 2627 aaKnown RBP6.59□□□□□ -1.35
CLIP1-203ENST00000361654 Q8NDZ9 215 aa6.59□□□□□ -1.35
CLIP1-203ENST00000361654 M0QZ58 72 aa6.58□□□□□ -1.36
CLIP1-203ENST00000361654 VPS13AQ96RL7 3174 aa6.58□□□□□ -1.36
CLIP1-203ENST00000361654 VCANP13611 3396 aa6.58□□□□□ -1.36
CLIP1-203ENST00000361654 NBEAQ8NFP9 2946 aa6.58□□□□□ -1.36
CLIP1-203ENST00000361654 CELSR3Q9NYQ7 3312 aa6.57□□□□□ -1.36
CLIP1-203ENST00000361654 LINC00472Q9H8W2 130 aa6.57□□□□□ -1.36
CLIP1-203ENST00000361654 LINC01558Q9Y6Z2 57 aa6.54□□□□□ -1.36
CLIP1-203ENST00000361654 Q6ZR54 194 aa6.54□□□□□ -1.36
CLIP1-203ENST00000361654 FREM2Q5SZK8 3169 aa6.53□□□□□ -1.36
CLIP1-203ENST00000361654 Q75L30 129 aa6.53□□□□□ -1.36
CLIP1-203ENST00000361654 LAMA1P25391 3075 aa6.52□□□□□ -1.37
CLIP1-203ENST00000361654 RPL37P61927 97 aaKnown RBP6.51□□□□□ -1.37
CLIP1-203ENST00000361654 Q5VV11 94 aa6.51□□□□□ -1.37
CLIP1-203ENST00000361654 NBEAL1Q6ZS30 2694 aa6.5□□□□□ -1.37
CLIP1-203ENST00000361654 PRUNE2Q8WUY3 3088 aa6.5□□□□□ -1.37
CLIP1-203ENST00000361654 COL6A5A8TX70 2615 aa6.5□□□□□ -1.37
CLIP1-203ENST00000361654 DSPP15924 2871 aaKnown RBP6.49□□□□□ -1.37
CLIP1-203ENST00000361654 KRTAP21-3Q3LHN1 58 aa6.48□□□□□ -1.37
CLIP1-203ENST00000361654 SZT2Q5T011 3432 aa6.48□□□□□ -1.37
CLIP1-203ENST00000361654 TEX15Q9BXT5 2789 aa6.48□□□□□ -1.37
CLIP1-203ENST00000361654 FRYQ5TBA9 3013 aa6.47□□□□□ -1.37
CLIP1-203ENST00000361654 KRTAP26-1Q6PEX3 210 aa6.47□□□□□ -1.37
CLIP1-203ENST00000361654 BAHCC1Q9P281 2608 aa6.47□□□□□ -1.37
CLIP1-203ENST00000361654 WDFY4Q6ZS81 3184 aa6.45□□□□□ -1.38
CLIP1-203ENST00000361654 DMBT1Q9UGM3 2413 aaPredicted RBP6.44□□□□□ -1.38
CLIP1-203ENST00000361654 ADM2Q7Z4H4 148 aa6.44□□□□□ -1.38
CLIP1-203ENST00000361654 MGAQ8IWI9 3026 aa6.44□□□□□ -1.38
CLIP1-203ENST00000361654 SPEGQ15772 3267 aa6.43□□□□□ -1.38
CLIP1-203ENST00000361654 H1FX-AS1Q4G0G2 97 aa6.43□□□□□ -1.38
CLIP1-203ENST00000361654 RPS29P62273 56 aaKnown RBP6.43□□□□□ -1.38
CLIP1-203ENST00000361654 UNC79Q9P2D8 2635 aa6.42□□□□□ -1.38
CLIP1-203ENST00000361654 H3BS24 57 aa6.41□□□□□ -1.38
CLIP1-203ENST00000361654 SPTBN5Q9NRC6 3674 aaKnown RBP6.41□□□□□ -1.38
CLIP1-203ENST00000361654 NOTCH1P46531 2555 aa6.41□□□□□ -1.38
CLIP1-203ENST00000361654 ROMO1P60602 79 aa6.41□□□□□ -1.38
CLIP1-203ENST00000361654 STAB2Q8WWQ8 2551 aa6.4□□□□□ -1.38
CLIP1-203ENST00000361654 PRAC1Q96KF2 57 aa6.4□□□□□ -1.38
CLIP1-203ENST00000361654 FRYLO94915 3013 aa6.4□□□□□ -1.39
CLIP1-203ENST00000361654 CENPEQ02224 2701 aa6.4□□□□□ -1.39
CLIP1-203ENST00000361654 AKAP13Q12802 2813 aa6.39□□□□□ -1.39
CLIP1-203ENST00000361654 PANO1I0J062 215 aa6.38□□□□□ -1.39
CLIP1-203ENST00000361654 A0A087X002 238 aa6.37□□□□□ -1.39
CLIP1-203ENST00000361654 MUC3AQ02505 3323 aa6.37□□□□□ -1.39
CLIP1-203ENST00000361654 KALRNO60229 2985 aa6.35□□□□□ -1.39
CLIP1-203ENST00000361654 EYSQ5T1H1 3165 aa6.34□□□□□ -1.39
CLIP1-203ENST00000361654 CHD6Q8TD26 2715 aa6.32□□□□□ -1.4
CLIP1-203ENST00000361654 ASB16-AS1Q495Z4 193 aa6.32□□□□□ -1.4
CLIP1-203ENST00000361654 C20orf166-AS1Q96NR2 134 aa6.32□□□□□ -1.4
CLIP1-203ENST00000361654 KRTAP4-16G5E9R7 235 aaPredicted RBP6.3□□□□□ -1.4
CLIP1-203ENST00000361654 REV3LO60673 3130 aa6.28□□□□□ -1.4
CLIP1-203ENST00000361654 MYO15AQ9UKN7 3530 aa6.28□□□□□ -1.4
CLIP1-203ENST00000361654 A8MUU9 505 aa6.28□□□□□ -1.4
CLIP1-203ENST00000361654 A8MU10 97 aa6.27□□□□□ -1.41
CLIP1-203ENST00000361654 Q6ZRN7 208 aaPredicted RBP6.27□□□□□ -1.41
CLIP1-203ENST00000361654 COL6A3P12111 3177 aa6.27□□□□□ -1.41
CLIP1-203ENST00000361654 SPATA8Q6RVD6 105 aa6.24□□□□□ -1.41
CLIP1-203ENST00000361654 USP34Q70CQ2 3546 aa6.24□□□□□ -1.41
CLIP1-203ENST00000361654 ADGRG4Q8IZF6 3080 aa6.22□□□□□ -1.41
CLIP1-203ENST00000361654 A6NN06 94 aa6.22□□□□□ -1.41
CLIP1-203ENST00000361654 IGSF10Q6WRI0 2623 aa6.22□□□□□ -1.41
CLIP1-203ENST00000361654 MAP1AP78559 2803 aaPredicted RBP6.22□□□□□ -1.41
CLIP1-203ENST00000361654 ZZEF1O43149 2961 aa6.22□□□□□ -1.41
CLIP1-203ENST00000361654 BOD1L1Q8NFC6 3051 aa6.21□□□□□ -1.41
CLIP1-203ENST00000361654 TACC2O95359 2948 aa6.21□□□□□ -1.42
CLIP1-203ENST00000361654 KRTAP29-1A8MX34 341 aaPredicted RBP6.21□□□□□ -1.42
CLIP1-203ENST00000361654 ZNF292O60281 2723 aa6.2□□□□□ -1.42
CLIP1-203ENST00000361654 GCN1Q92616 2671 aaKnown RBP6.2□□□□□ -1.42
CLIP1-203ENST00000361654 NSD1Q96L73 2696 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms