RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 Q8N377 158 aa3.99□□□□□ -1.77
VPS13B-203ENST00000358544 COL7A1Q02388 2944 aa3.98□□□□□ -1.77
VPS13B-203ENST00000358544 MRPL34Q9BQ48 92 aaKnown RBP3.98□□□□□ -1.77
VPS13B-203ENST00000358544 CRIPTQ9P021 101 aa3.98□□□□□ -1.77
VPS13B-203ENST00000358544 A0A1B0GVX0 72 aa3.97□□□□□ -1.77
VPS13B-203ENST00000358544 IGLV5-52A0A0A0MRZ9 124 aa3.97□□□□□ -1.77
VPS13B-203ENST00000358544 NUPR2A6NF83 97 aa3.97□□□□□ -1.77
VPS13B-203ENST00000358544 LINC00313P59037 77 aa3.96□□□□□ -1.77
VPS13B-203ENST00000358544 C15orf56Q8N910 161 aa3.96□□□□□ -1.78
VPS13B-203ENST00000358544 PRR34Q9NV39 138 aa3.96□□□□□ -1.78
VPS13B-203ENST00000358544 DSCR10P59022 87 aa3.96□□□□□ -1.78
VPS13B-203ENST00000358544 LINC00612Q8N6U2 182 aa3.96□□□□□ -1.78
VPS13B-203ENST00000358544 IGLV5-48A0A075B6I7 105 aa3.95□□□□□ -1.78
VPS13B-203ENST00000358544 IGLV7-46A0A075B6I9 117 aa3.95□□□□□ -1.78
VPS13B-203ENST00000358544 SPINK7P58062 85 aa3.94□□□□□ -1.78
VPS13B-203ENST00000358544 INAFM1C9JVW0 142 aa3.94□□□□□ -1.78
VPS13B-203ENST00000358544 C5orf42Q9H799 3197 aa3.94□□□□□ -1.78
VPS13B-203ENST00000358544 Q8NAQ8 132 aa3.94□□□□□ -1.78
VPS13B-203ENST00000358544 DMAC1Q96GE9 116 aa3.94□□□□□ -1.78
VPS13B-203ENST00000358544 ADGRG4Q8IZF6 3080 aa3.94□□□□□ -1.78
VPS13B-203ENST00000358544 PHF5AQ7RTV0 110 aaKnown RBP3.94□□□□□ -1.78
VPS13B-203ENST00000358544 CSNK1G2-AS1Q8NCQ2 148 aa3.94□□□□□ -1.78
VPS13B-203ENST00000358544 PLA2G2DQ9UNK4 145 aa3.93□□□□□ -1.78
VPS13B-203ENST00000358544 C1orf134Q5TEV5 83 aa3.93□□□□□ -1.78
VPS13B-203ENST00000358544 PRR26Q8N8Z3 221 aa3.93□□□□□ -1.78
VPS13B-203ENST00000358544 GIG44P09565 113 aaPredicted RBP3.92□□□□□ -1.78
VPS13B-203ENST00000358544 DNAH10OSP0CZ25 163 aa3.92□□□□□ -1.78
VPS13B-203ENST00000358544 SPRR4Q96PI1 79 aa3.92□□□□□ -1.78
VPS13B-203ENST00000358544 LUZP6Q538Z0 58 aa3.92□□□□□ -1.78
VPS13B-203ENST00000358544 CSAG1Q6PB30 78 aa3.92□□□□□ -1.78
VPS13B-203ENST00000358544 PRO3102Q9H379 93 aa3.91□□□□□ -1.78
VPS13B-203ENST00000358544 MKI67P46013 3256 aaKnown RBP3.91□□□□□ -1.78
VPS13B-203ENST00000358544 SPACA4Q8TDM5 124 aa3.91□□□□□ -1.78
VPS13B-203ENST00000358544 KRTAP10-9P60411 292 aa3.9□□□□□ -1.78
VPS13B-203ENST00000358544 CNBPP62633 177 aaKnown RBP3.9□□□□□ -1.78
VPS13B-203ENST00000358544 CHTF8P0CG12 524 aa3.9□□□□□ -1.78
VPS13B-203ENST00000358544 HRES1P13985 223 aa3.9□□□□□ -1.79
VPS13B-203ENST00000358544 TLX1NBP0CAT3 122 aa3.9□□□□□ -1.79
VPS13B-203ENST00000358544 APLNQ9ULZ1 77 aa3.89□□□□□ -1.79
VPS13B-203ENST00000358544 A6NN06 94 aa3.89□□□□□ -1.79
VPS13B-203ENST00000358544 C9orf163Q8N9P6 203 aa3.89□□□□□ -1.79
VPS13B-203ENST00000358544 LAMA3Q16787 3333 aa3.88□□□□□ -1.79
VPS13B-203ENST00000358544 WDFY4Q6ZS81 3184 aa3.88□□□□□ -1.79
VPS13B-203ENST00000358544 IGLV5-37A0A075B6J1 123 aa3.88□□□□□ -1.79
VPS13B-203ENST00000358544 HTTP42858 3142 aa3.87□□□□□ -1.79
VPS13B-203ENST00000358544 CELSR1Q9NYQ6 3014 aa3.87□□□□□ -1.79
VPS13B-203ENST00000358544 Q96NJ1 140 aa3.87□□□□□ -1.79
VPS13B-203ENST00000358544 A0A087X002 238 aa3.86□□□□□ -1.79
VPS13B-203ENST00000358544 BOD1L1Q8NFC6 3051 aa3.86□□□□□ -1.79
VPS13B-203ENST00000358544 A0A0A0MQY5 61 aa3.86□□□□□ -1.79
VPS13B-203ENST00000358544 REV3LO60673 3130 aa3.86□□□□□ -1.79
VPS13B-203ENST00000358544 C19orf73Q9NVV2 129 aa3.86□□□□□ -1.79
VPS13B-203ENST00000358544 Q8NDZ9 215 aa3.86□□□□□ -1.79
VPS13B-203ENST00000358544 Q8N1X5 172 aa3.85□□□□□ -1.79
VPS13B-203ENST00000358544 FBN1P35555 2871 aaKnown RBP3.85□□□□□ -1.79
VPS13B-203ENST00000358544 MMP24-AS1A0A0U1RRL7 71 aa3.85□□□□□ -1.79
VPS13B-203ENST00000358544 LY6G6CO95867 125 aa3.85□□□□□ -1.79
VPS13B-203ENST00000358544 A0A0D9SG42 100 aa3.85□□□□□ -1.79
VPS13B-203ENST00000358544 A0A1B0GU33 70 aa3.84□□□□□ -1.79
VPS13B-203ENST00000358544 ZCCHC13Q8WW36 166 aaKnown RBP3.84□□□□□ -1.79
VPS13B-203ENST00000358544 USP34Q70CQ2 3546 aa3.83□□□□□ -1.8
VPS13B-203ENST00000358544 SMR3AQ99954 134 aa3.83□□□□□ -1.8
VPS13B-203ENST00000358544 NBDYA0A0U1RRE5 68 aa3.83□□□□□ -1.8
VPS13B-203ENST00000358544 RTL8CO15255 209 aa3.83□□□□□ -1.8
VPS13B-203ENST00000358544 PLA2G1BP04054 148 aaKnown RBP3.82□□□□□ -1.8
VPS13B-203ENST00000358544 CASC10Q5T4H9 136 aa3.81□□□□□ -1.8
VPS13B-203ENST00000358544 HRNRQ86YZ3 2850 aaPredicted RBP3.81□□□□□ -1.8
VPS13B-203ENST00000358544 ANAPC11Q9NYG5 84 aa3.8□□□□□ -1.8
VPS13B-203ENST00000358544 CDH23Q9H251 3354 aa3.8□□□□□ -1.8
VPS13B-203ENST00000358544 EYSQ5T1H1 3165 aa3.79□□□□□ -1.8
VPS13B-203ENST00000358544 Q5W150 140 aa3.78□□□□□ -1.8
VPS13B-203ENST00000358544 TNP2Q05952 138 aa3.78□□□□□ -1.8
VPS13B-203ENST00000358544 XIRP2A4UGR9 3374 aa3.78□□□□□ -1.8
VPS13B-203ENST00000358544 LINC00472Q9H8W2 130 aa3.78□□□□□ -1.81
VPS13B-203ENST00000358544 TYMSOSQ8TAI1 123 aa3.77□□□□□ -1.81
VPS13B-203ENST00000358544 ZNF861PO60384 105 aa3.77□□□□□ -1.81
VPS13B-203ENST00000358544 LCE6AA0A183 80 aa3.77□□□□□ -1.81
VPS13B-203ENST00000358544 IGLV7-43P04211 117 aa3.76□□□□□ -1.81
VPS13B-203ENST00000358544 LINC00304Q8N9R0 145 aa3.76□□□□□ -1.81
VPS13B-203ENST00000358544 DNAH14Q0VDD8 3507 aa3.76□□□□□ -1.81
VPS13B-203ENST00000358544 A8MU10 97 aa3.76□□□□□ -1.81
VPS13B-203ENST00000358544 SPRR1AP35321 89 aa3.75□□□□□ -1.81
VPS13B-203ENST00000358544 SPATA8Q6RVD6 105 aa3.75□□□□□ -1.81
VPS13B-203ENST00000358544 KRTAP29-1A8MX34 341 aaPredicted RBP3.75□□□□□ -1.81
VPS13B-203ENST00000358544 KRTAP16-1A8MUX0 517 aa3.73□□□□□ -1.81
VPS13B-203ENST00000358544 Q6ZR54 194 aa3.73□□□□□ -1.81
VPS13B-203ENST00000358544 MEGF8Q7Z7M0 2845 aa3.73□□□□□ -1.81
VPS13B-203ENST00000358544 C9orf92A6NGG3 77 aa3.73□□□□□ -1.81
VPS13B-203ENST00000358544 LINC00483Q53H64 154 aa3.72□□□□□ -1.81
VPS13B-203ENST00000358544 PSORS1C2Q9UIG4 136 aa3.72□□□□□ -1.81
VPS13B-203ENST00000358544 ROMO1P60602 79 aa3.72□□□□□ -1.81
VPS13B-203ENST00000358544 SZT2Q5T011 3432 aa3.72□□□□□ -1.81
VPS13B-203ENST00000358544 UNC80Q8N2C7 3258 aa3.71□□□□□ -1.81
VPS13B-203ENST00000358544 SPRR1BP22528 89 aa3.71□□□□□ -1.82
VPS13B-203ENST00000358544 RANBP2P49792 3224 aaKnown RBP3.71□□□□□ -1.82
VPS13B-203ENST00000358544 KRTAP10-11P60412 298 aa3.7□□□□□ -1.82
VPS13B-203ENST00000358544 KRTAP25-1Q3LHN0 102 aa3.7□□□□□ -1.82
VPS13B-203ENST00000358544 FBN3Q75N90 2809 aa3.7□□□□□ -1.82
VPS13B-203ENST00000358544 ADM2Q7Z4H4 148 aa3.69□□□□□ -1.82
VPS13B-203ENST00000358544 KRTAP26-1Q6PEX3 210 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms