RNA–Protein interactions for RNA: ENST00000356861.9

TNPO2-201, Transcript of transportin 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNPO2, Length 4,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO2-201ENST00000356861 C9orf92A6NGG3 77 aa11.32□□□□□ -0.6
TNPO2-201ENST00000356861 LAMA1P25391 3075 aa11.32□□□□□ -0.6
TNPO2-201ENST00000356861 TNP2Q05952 138 aa11.32□□□□□ -0.6
TNPO2-201ENST00000356861 CELSR3Q9NYQ7 3312 aa11.31□□□□□ -0.6
TNPO2-201ENST00000356861 FLNCQ14315 2725 aa11.28□□□□□ -0.6
TNPO2-201ENST00000356861 SZT2Q5T011 3432 aa11.28□□□□□ -0.6
TNPO2-201ENST00000356861 CD164Q04900 197 aa11.27□□□□□ -0.61
TNPO2-201ENST00000356861 VCANP13611 3396 aa11.25□□□□□ -0.61
TNPO2-201ENST00000356861 NBEAQ8NFP9 2946 aa11.25□□□□□ -0.61
TNPO2-201ENST00000356861 MIR22HGQ0VDD5 57 aa11.25□□□□□ -0.61
TNPO2-201ENST00000356861 KRTAP26-1Q6PEX3 210 aa11.23□□□□□ -0.61
TNPO2-201ENST00000356861 ATMQ13315 3056 aa11.21□□□□□ -0.61
TNPO2-201ENST00000356861 FREM2Q5SZK8 3169 aa11.21□□□□□ -0.61
TNPO2-201ENST00000356861 ITPR1Q14643 2758 aa11.19□□□□□ -0.62
TNPO2-201ENST00000356861 KALRNO60229 2985 aa11.19□□□□□ -0.62
TNPO2-201ENST00000356861 J3QL48 77 aa11.18□□□□□ -0.62
TNPO2-201ENST00000356861 PLAC8Q9NZF1 115 aa11.18□□□□□ -0.62
TNPO2-201ENST00000356861 SPRR1BP22528 89 aa11.17□□□□□ -0.62
TNPO2-201ENST00000356861 ADGRG4Q8IZF6 3080 aa11.16□□□□□ -0.62
TNPO2-201ENST00000356861 KRTAP1-5Q9BYS1 174 aa11.16□□□□□ -0.62
TNPO2-201ENST00000356861 FRYLO94915 3013 aa11.16□□□□□ -0.62
TNPO2-201ENST00000356861 Q8N1X5 172 aa11.15□□□□□ -0.62
TNPO2-201ENST00000356861 PRR26Q8N8Z3 221 aa11.15□□□□□ -0.63
TNPO2-201ENST00000356861 MMP24-AS1A0A0U1RRL7 71 aa11.14□□□□□ -0.63
TNPO2-201ENST00000356861 IGLV7-46A0A075B6I9 117 aa11.14□□□□□ -0.63
TNPO2-201ENST00000356861 TACC2O95359 2948 aa11.13□□□□□ -0.63
TNPO2-201ENST00000356861 Q1T7F1 81 aa11.13□□□□□ -0.63
TNPO2-201ENST00000356861 FAM229BQ4G0N7 80 aa11.12□□□□□ -0.63
TNPO2-201ENST00000356861 COL12A1Q99715 3063 aa11.12□□□□□ -0.63
TNPO2-201ENST00000356861 CYSTM1Q9H1C7 97 aa11.11□□□□□ -0.63
TNPO2-201ENST00000356861 NSD1Q96L73 2696 aaPredicted RBP11.11□□□□□ -0.63
TNPO2-201ENST00000356861 BOD1L1Q8NFC6 3051 aa11.11□□□□□ -0.63
TNPO2-201ENST00000356861 LINC00472Q9H8W2 130 aa11.09□□□□□ -0.63
TNPO2-201ENST00000356861 DNAH14Q0VDD8 3507 aa11.07□□□□□ -0.64
TNPO2-201ENST00000356861 CDC42SE1Q9NRR8 79 aa11.07□□□□□ -0.64
TNPO2-201ENST00000356861 HRES1P13985 223 aa11.04□□□□□ -0.64
TNPO2-201ENST00000356861 COX6B2Q6YFQ2 88 aa11.04□□□□□ -0.64
TNPO2-201ENST00000356861 ITPR2Q14571 2701 aa11.03□□□□□ -0.64
TNPO2-201ENST00000356861 KTN1-AS1Q86SY8 53 aa11.03□□□□□ -0.64
TNPO2-201ENST00000356861 DMXL2Q8TDJ6 3036 aa11.02□□□□□ -0.65
TNPO2-201ENST00000356861 BAHCC1Q9P281 2608 aa11.02□□□□□ -0.65
TNPO2-201ENST00000356861 STAB2Q8WWQ8 2551 aa11.01□□□□□ -0.65
TNPO2-201ENST00000356861 RBM12B-AS1Q9P1G2 102 aa10.99□□□□□ -0.65
TNPO2-201ENST00000356861 SPINT4Q6UDR6 99 aa10.97□□□□□ -0.65
TNPO2-201ENST00000356861 LRBAP50851 2863 aa10.97□□□□□ -0.65
TNPO2-201ENST00000356861 KRTAP4-16G5E9R7 235 aaPredicted RBP10.96□□□□□ -0.65
TNPO2-201ENST00000356861 Q8N9P0 234 aaPredicted RBP10.96□□□□□ -0.65
TNPO2-201ENST00000356861 Q5XG85 94 aa10.95□□□□□ -0.66
TNPO2-201ENST00000356861 FP248Q71RG6 208 aaPredicted RBP10.95□□□□□ -0.66
TNPO2-201ENST00000356861 CRIPTQ9P021 101 aa10.94□□□□□ -0.66
TNPO2-201ENST00000356861 Q75L30 129 aa10.92□□□□□ -0.66
TNPO2-201ENST00000356861 LCA10Q71F78 164 aa10.91□□□□□ -0.66
TNPO2-201ENST00000356861 ZCCHC13Q8WW36 166 aaKnown RBP10.89□□□□□ -0.67
TNPO2-201ENST00000356861 LINC01558Q9Y6Z2 57 aa10.89□□□□□ -0.67
TNPO2-201ENST00000356861 UTP20O75691 2785 aaKnown RBP10.89□□□□□ -0.67
TNPO2-201ENST00000356861 COL6A3P12111 3177 aa10.88□□□□□ -0.67
TNPO2-201ENST00000356861 ZZEF1O43149 2961 aa10.88□□□□□ -0.67
TNPO2-201ENST00000356861 A0A0D9SG42 100 aa10.87□□□□□ -0.67
TNPO2-201ENST00000356861 Q5W150 140 aa10.87□□□□□ -0.67
TNPO2-201ENST00000356861 ASH1LQ9NR48 2969 aaKnown RBP10.86□□□□□ -0.67
TNPO2-201ENST00000356861 LINC00483Q53H64 154 aa10.84□□□□□ -0.67
TNPO2-201ENST00000356861 PANO1I0J062 215 aa10.83□□□□□ -0.68
TNPO2-201ENST00000356861 Q6ZSA8 131 aa10.81□□□□□ -0.68
TNPO2-201ENST00000356861 A0A1B0GU33 70 aa10.81□□□□□ -0.68
TNPO2-201ENST00000356861 NIPBLQ6KC79 2804 aaeCLIP10.8□□□□□ -0.683e-8■■□□□ 13.8
TNPO2-201ENST00000356861 LINC01554Q52M75 96 aa10.8□□□□□ -0.68
TNPO2-201ENST00000356861 KRTAP10-1P60331 282 aa10.79□□□□□ -0.68
TNPO2-201ENST00000356861 HIVEP1P15822 2718 aa10.79□□□□□ -0.68
TNPO2-201ENST00000356861 KRTAP10-2P60368 255 aa10.79□□□□□ -0.68
TNPO2-201ENST00000356861 OXTP01178 125 aa10.78□□□□□ -0.68
TNPO2-201ENST00000356861 REV3LO60673 3130 aa10.77□□□□□ -0.69
TNPO2-201ENST00000356861 FLG2Q5D862 2391 aaPredicted RBP10.77□□□□□ -0.69
TNPO2-201ENST00000356861 Q5VV11 94 aa10.75□□□□□ -0.69
TNPO2-201ENST00000356861 ZANQ9Y493 2812 aa10.75□□□□□ -0.69
TNPO2-201ENST00000356861 CFAP47Q6ZTR5 3102 aa10.75□□□□□ -0.69
TNPO2-201ENST00000356861 Q6ZR54 194 aa10.75□□□□□ -0.69
TNPO2-201ENST00000356861 KRTAP29-1A8MX34 341 aaPredicted RBP10.74□□□□□ -0.69
TNPO2-201ENST00000356861 APCP25054 2843 aa10.74□□□□□ -0.69
TNPO2-201ENST00000356861 DMBT1Q9UGM3 2413 aaPredicted RBP10.72□□□□□ -0.69
TNPO2-201ENST00000356861 CELSR2Q9HCU4 2923 aa10.72□□□□□ -0.69
TNPO2-201ENST00000356861 EYSQ5T1H1 3165 aa10.71□□□□□ -0.69
TNPO2-201ENST00000356861 SPINK7P58062 85 aa10.71□□□□□ -0.69
TNPO2-201ENST00000356861 SPEGQ15772 3267 aa10.69□□□□□ -0.7
TNPO2-201ENST00000356861 KMT2BQ9UMN6 2715 aaPredicted RBP10.66□□□□□ -0.7
TNPO2-201ENST00000356861 LCE6AA0A183 80 aa10.65□□□□□ -0.71
TNPO2-201ENST00000356861 KRTAP7-1Q8IUC3 87 aa10.64□□□□□ -0.71
TNPO2-201ENST00000356861 DMXL1Q9Y485 3027 aa10.63□□□□□ -0.71
TNPO2-201ENST00000356861 TNRC18O15417 2968 aaPredicted RBP10.63□□□□□ -0.71
TNPO2-201ENST00000356861 KRTAP11-1Q8IUC1 163 aa10.63□□□□□ -0.71
TNPO2-201ENST00000356861 DMAC1Q96GE9 116 aa10.63□□□□□ -0.71
TNPO2-201ENST00000356861 Q6ZRN7 208 aaPredicted RBP10.61□□□□□ -0.71
TNPO2-201ENST00000356861 A0A087X002 238 aa10.6□□□□□ -0.71
TNPO2-201ENST00000356861 CSAG1Q6PB30 78 aa10.6□□□□□ -0.71
TNPO2-201ENST00000356861 DCHS2Q6V1P9 2916 aa10.58□□□□□ -0.72
TNPO2-201ENST00000356861 S4R3F8 94 aa10.56□□□□□ -0.72
TNPO2-201ENST00000356861 SPTBN5Q9NRC6 3674 aaKnown RBP10.55□□□□□ -0.72
TNPO2-201ENST00000356861 Q5VSD8 79 aa10.55□□□□□ -0.72
TNPO2-201ENST00000356861 TENM4Q6N022 2769 aa10.55□□□□□ -0.72
TNPO2-201ENST00000356861 HRNRQ86YZ3 2850 aaPredicted RBP10.53□□□□□ -0.72
TNPO2-201ENST00000356861 NOTCH2NLQ7Z3S9 236 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms