RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 LINC00588Q9Y4M8 146 aa6.43□□□□□ -1.38
PTPRA-203ENST00000356147 A8MU10 97 aa6.42□□□□□ -1.38
PTPRA-203ENST00000356147 ZCCHC13Q8WW36 166 aaKnown RBP6.42□□□□□ -1.38
PTPRA-203ENST00000356147 LINC00208Q96KT6 92 aa6.42□□□□□ -1.38
PTPRA-203ENST00000356147 REG3GQ6UW15 175 aa6.42□□□□□ -1.38
PTPRA-203ENST00000356147 DNAH10OSP0CZ25 163 aa6.41□□□□□ -1.38
PTPRA-203ENST00000356147 LCE6AA0A183 80 aa6.41□□□□□ -1.38
PTPRA-203ENST00000356147 F8WDY8 70 aa6.4□□□□□ -1.39
PTPRA-203ENST00000356147 TLX1NBP0CAT3 122 aa6.4□□□□□ -1.39
PTPRA-203ENST00000356147 TRAV22A0A0B4J277 110 aa6.39□□□□□ -1.39
PTPRA-203ENST00000356147 A8MUN3 132 aa6.39□□□□□ -1.39
PTPRA-203ENST00000356147 STAB2Q8WWQ8 2551 aa6.39□□□□□ -1.39
PTPRA-203ENST00000356147 CHTF8P0CG12 524 aa6.38□□□□□ -1.39
PTPRA-203ENST00000356147 PLA2G2DQ9UNK4 145 aa6.38□□□□□ -1.39
PTPRA-203ENST00000356147 MGAM2Q2M2H8 2515 aa6.37□□□□□ -1.39
PTPRA-203ENST00000356147 IGLV5-37A0A075B6J1 123 aa6.36□□□□□ -1.39
PTPRA-203ENST00000356147 KRTAP11-1Q8IUC1 163 aa6.36□□□□□ -1.39
PTPRA-203ENST00000356147 MP68P56378 58 aa6.36□□□□□ -1.39
PTPRA-203ENST00000356147 UBE2AP49459 152 aa6.35□□□□□ -1.39
PTPRA-203ENST00000356147 A0A1B0GW54 56 aa6.35□□□□□ -1.39
PTPRA-203ENST00000356147 V9GYY9 64 aa6.35□□□□□ -1.39
PTPRA-203ENST00000356147 DNAH1Q9P2D7 4330 aa6.34□□□□□ -1.39
PTPRA-203ENST00000356147 Q1T7F1 81 aa6.34□□□□□ -1.39
PTPRA-203ENST00000356147 H0Y9P7 68 aa6.34□□□□□ -1.39
PTPRA-203ENST00000356147 PHF5AQ7RTV0 110 aaKnown RBP6.34□□□□□ -1.39
PTPRA-203ENST00000356147 CASC2Q6XLA1 102 aa6.33□□□□□ -1.4
PTPRA-203ENST00000356147 KRTAP1-5Q9BYS1 174 aa6.33□□□□□ -1.4
PTPRA-203ENST00000356147 B9D2Q9BPU9 175 aa6.32□□□□□ -1.4
PTPRA-203ENST00000356147 CMYA5Q8N3K9 4069 aa6.32□□□□□ -1.4
PTPRA-203ENST00000356147 H0Y9J4 135 aa6.32□□□□□ -1.4
PTPRA-203ENST00000356147 CNBPP62633 177 aaKnown RBP6.31□□□□□ -1.4
PTPRA-203ENST00000356147 DNAH9Q9NYC9 4486 aa6.31□□□□□ -1.4
PTPRA-203ENST00000356147 CYP4F30PQ9H0H9 118 aa6.31□□□□□ -1.4
PTPRA-203ENST00000356147 KRTAP29-1A8MX34 341 aaPredicted RBP6.3□□□□□ -1.4
PTPRA-203ENST00000356147 PCOTHQ58A44 107 aa6.29□□□□□ -1.4
PTPRA-203ENST00000356147 NDUFB1O75438 58 aa6.28□□□□□ -1.4
PTPRA-203ENST00000356147 KRTAP24-1Q3LI83 254 aa6.28□□□□□ -1.4
PTPRA-203ENST00000356147 PRR15Q8IV56 129 aa6.28□□□□□ -1.4
PTPRA-203ENST00000356147 CHKB-CPT1BH3BT56 60 aa6.28□□□□□ -1.4
PTPRA-203ENST00000356147 SEC61GP60059 68 aa6.28□□□□□ -1.4
PTPRA-203ENST00000356147 Q5VV11 94 aa6.28□□□□□ -1.4
PTPRA-203ENST00000356147 PRR15LQ9BU68 103 aa6.28□□□□□ -1.4
PTPRA-203ENST00000356147 HUWE1Q7Z6Z7 4374 aaKnown RBP6.27□□□□□ -1.4
PTPRA-203ENST00000356147 C16orf90A8MZG2 172 aa6.27□□□□□ -1.41
PTPRA-203ENST00000356147 PMAIP1Q13794 54 aa6.26□□□□□ -1.41
PTPRA-203ENST00000356147 SPTSSBQ8NFR3 76 aa6.25□□□□□ -1.41
PTPRA-203ENST00000356147 IGLV9-49A0A0B4J1Y8 123 aa6.25□□□□□ -1.41
PTPRA-203ENST00000356147 A8MWP4 228 aa6.25□□□□□ -1.41
PTPRA-203ENST00000356147 Q8N9P0 234 aaPredicted RBP6.25□□□□□ -1.41
PTPRA-203ENST00000356147 LINC00472Q9H8W2 130 aa6.25□□□□□ -1.41
PTPRA-203ENST00000356147 PANO1I0J062 215 aa6.24□□□□□ -1.41
PTPRA-203ENST00000356147 IGLV8-61A0A075B6I0 122 aa6.23□□□□□ -1.41
PTPRA-203ENST00000356147 DNAH7Q8WXX0 4024 aa6.23□□□□□ -1.41
PTPRA-203ENST00000356147 MMP24-AS1A0A0U1RRL7 71 aa6.21□□□□□ -1.41
PTPRA-203ENST00000356147 NDUFS5O43920 106 aa6.21□□□□□ -1.41
PTPRA-203ENST00000356147 COA5Q86WW8 74 aa6.21□□□□□ -1.41
PTPRA-203ENST00000356147 UBE2DNLQ8IWF7 75 aa6.21□□□□□ -1.41
PTPRA-203ENST00000356147 C9orf163Q8N9P6 203 aa6.21□□□□□ -1.42
PTPRA-203ENST00000356147 ANAPC11Q9NYG5 84 aa6.2□□□□□ -1.42
PTPRA-203ENST00000356147 A6NED7 52 aa6.19□□□□□ -1.42
PTPRA-203ENST00000356147 SPAG11AQ6PDA7 123 aa6.19□□□□□ -1.42
PTPRA-203ENST00000356147 DNAH3Q8TD57 4116 aa6.19□□□□□ -1.42
PTPRA-203ENST00000356147 K7EIL1 84 aa6.19□□□□□ -1.42
PTPRA-203ENST00000356147 CD164Q04900 197 aa6.19□□□□□ -1.42
PTPRA-203ENST00000356147 SPANXA2-OT1Q8N9U9 137 aa6.18□□□□□ -1.42
PTPRA-203ENST00000356147 IGHV6-1A0A0B4J1U7 121 aa6.18□□□□□ -1.42
PTPRA-203ENST00000356147 LCA10Q71F78 164 aa6.18□□□□□ -1.42
PTPRA-203ENST00000356147 LIMD2Q9BT23 127 aa6.16□□□□□ -1.42
PTPRA-203ENST00000356147 A0A087X002 238 aa6.15□□□□□ -1.42
PTPRA-203ENST00000356147 NOTCH2NLQ7Z3S9 236 aa6.15□□□□□ -1.42
PTPRA-203ENST00000356147 SPRR1BP22528 89 aa6.14□□□□□ -1.43
PTPRA-203ENST00000356147 MOBPQ13875 183 aa6.14□□□□□ -1.43
PTPRA-203ENST00000356147 H3BPC8 53 aa6.14□□□□□ -1.43
PTPRA-203ENST00000356147 Q96NJ1 140 aa6.14□□□□□ -1.43
PTPRA-203ENST00000356147 FRAS1Q86XX4 4008 aa6.14□□□□□ -1.43
PTPRA-203ENST00000356147 IGLV7-46A0A075B6I9 117 aa6.13□□□□□ -1.43
PTPRA-203ENST00000356147 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.13□□□□□ -1.43
PTPRA-203ENST00000356147 SPINK6Q6UWN8 80 aa6.12□□□□□ -1.43
PTPRA-203ENST00000356147 C8orf17Q9NRJ1 99 aa6.12□□□□□ -1.43
PTPRA-203ENST00000356147 PLECQ15149 4684 aaKnown RBP6.1□□□□□ -1.43
PTPRA-203ENST00000356147 C4orf48Q5BLP8 95 aa6.1□□□□□ -1.43
PTPRA-203ENST00000356147 SPINK7P58062 85 aa6.09□□□□□ -1.43
PTPRA-203ENST00000356147 Q75L30 129 aa6.09□□□□□ -1.43
PTPRA-203ENST00000356147 HRES1P13985 223 aa6.08□□□□□ -1.44
PTPRA-203ENST00000356147 KRTAP13-1Q8IUC0 172 aa6.08□□□□□ -1.44
PTPRA-203ENST00000356147 PRR26Q8N8Z3 221 aa6.08□□□□□ -1.44
PTPRA-203ENST00000356147 LOC101927531A0A1B0GV80 90 aa6.08□□□□□ -1.44
PTPRA-203ENST00000356147 APLNQ9ULZ1 77 aa6.08□□□□□ -1.44
PTPRA-203ENST00000356147 CDK2AP2O75956 126 aa6.08□□□□□ -1.44
PTPRA-203ENST00000356147 C14orf177Q52M58 125 aa6.07□□□□□ -1.44
PTPRA-203ENST00000356147 TGP01266 2768 aa6.06□□□□□ -1.44
PTPRA-203ENST00000356147 A0A1B0GVX0 72 aa6.06□□□□□ -1.44
PTPRA-203ENST00000356147 RETNLBQ9BQ08 111 aa6.06□□□□□ -1.44
PTPRA-203ENST00000356147 DNAH8Q96JB1 4490 aa6.05□□□□□ -1.44
PTPRA-203ENST00000356147 Q5W150 140 aa6.05□□□□□ -1.44
PTPRA-203ENST00000356147 MRPL34Q9BQ48 92 aaKnown RBP6.05□□□□□ -1.44
PTPRA-203ENST00000356147 KTN1-AS1Q86SY8 53 aa6.04□□□□□ -1.44
PTPRA-203ENST00000356147 TP53AIP1Q9HCN2 124 aa6.04□□□□□ -1.44
PTPRA-203ENST00000356147 ASB16-AS1Q495Z4 193 aa6.04□□□□□ -1.44
PTPRA-203ENST00000356147 ATP11AUNQ6ZP68 121 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms